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grant_code:"U24GM129539"

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Current Database

  • EMDB [14]

Current status

  • REL [14]

Sample type

  • Complex [13]
  • Protein [12]
  • RNA [9]
  • Ligand [5]
  • Cellular component [1]

Organism

  • Human respiratory syncytial virus [6]
  • Neisseria gonorrhoeae [3]
  • Escherichia coli [3]
  • Escherichia phage ecszw-2 [1]
  • Neisseria gonorrhoeae [1]
  • Bos taurus [1]

EM Method

  • Single-particle [13]
  • Tomography [1]

Resolution

  • ≥ 2Å and < 3Å [4]
  • ≥ 3Å and < 4Å [6]
  • ≥ 4Å and < 5Å [1]
  • ≥ 5Å and < 6Å [1]
  • ≥ 6Å and < 8Å [1]

Model molecular weight

  • 100-250 kDa [3]
  • 250-500 kDa [6]
  • 2-5 MDa [3]

Release Date

  • 2026 [4]
  • 2025 [6]
  • 2023 [3]
  • 2022 [1]

Author by name

  • Cao D [6]
  • Chen Z [6]
  • Gao Y [6]
  • Gooneratne I [6]
  • Liang B [6]
  • Mera C [6]
  • Roesler C [6]
  • Berry J [4]
  • Nudell-cook E [4]
  • Royal M [4]
  • Shaik M [4]
  • Slack J [4]
  • Vy J [4]
  • Youngs R [4]
  • Zhuang L [4]
  • Billings E [3]
  • Billings EM [3]
  • Conn GL [3]
  • Dey D [3]
  • Dunham CM [3]
  • Fan Z [3]
  • Gumbart JC [3]
  • Mattingly JM [3]
  • Noinaj N [3]
  • Sooreshjani MA [3]
  • Wang Q [3]
  • Zelinskaya N [3]
  • Antonova A [2]
  • D Cunha P [2]
  • Katta D [2]
  • Lemons W [2]
  • Ramanathan A [2]
  • Rice S [2]
  • Romanelli S [2]
  • Carragher B [1]
  • Cross S [1]
  • Jiang Q-X [1]
  • Jiang QX [1]
  • Koehler CM [1]
  • Lee D [1]
  • Li S [1]
  • Liang W [1]
  • Liang WG [1]
  • Lin King Jv [1]
  • Liu C [1]
  • Mancl JM [1]
  • Mo S [1]
  • Noble AJ [1]
  • Ouwendijk J [1]
  • Pan M [1]
  • Potter CS [1]
  • Qin F [1]
  • Tang WJ [1]
  • Verkade P [1]
  • Wang H [1]
  • Wei H [1]
  • Wijaya J [1]
  • Yadav GP [1]
  • Zhao M [1]
  • Zhu MX [1]

Author by ORCID

  • Gao Y [6]
  • Cao D [6]
  • Liang B [6]
  • Gooneratne I [6]
  • Chen Z [4]
  • Dey D [3]
  • Conn GL [3]
  • Billings E [3]
  • Dunham CM [3]
  • Zelinskaya N [3]
  • Mattingly JM [3]
  • Katta D [2]
  • Zhao M [1]
  • Wei H [1]
  • Pan M [1]
  • Lee D [1]
  • Noble AJ [1]
  • Liu C [1]
  • Carragher B [1]
  • Verkade P [1]
  • Yadav GP [1]
  • Zhu MX [1]
  • Tang WJ [1]
  • Li S [1]
  • Cross S [1]

Journal

  • NAT COMMUN [8]
  • STRUCTURE [3]
  • NATURE [2]
  • FRONT MOL NEUROSCI [1]

Software

  • COOT [4]
  • CRYOSPARC [4]
  • CTFFIND [3]
  • RELION [3]
  • PHENIX [1]
  • TOMO3D [1]
  • UCSF CHIMERAX [1]

Microscope

  • FEI TITAN KRIOS [7]
  • TFS KRIOS [7]

Electron Source

  • FIELD EMISSION GUN [14]

Film or detector model

  • GATAN K3 6K X 4K [9]
  • GATAN K3 BIOQUANTUM 6K X 4K [2]
  • TFS FALCON 4I 4K X 4K [2]
  • GATAN K2 QUANTUM 4K X 4K [1]

External links

  • PDB [14]
  • PDBe-Kb [12]
  • UniProt [12]
  • Gene Ontology [8]
  • InterPro [8]
  • AlphaFold DB [6]
  • Pfam [6]
  • ChEBI [5]
  • DrugBank [5]
  • ChEMBL [3]
  • EMPIAR [3]
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Showing 1 - 10 of 14. Page 1 of 2
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EMD-71611
Download Map
3D View
Cryo-EM structure of the respiratory syncytial virus polymerase L:P in NTP-bound elongation state
CryoEM
Release date: May 6, 2026
Resolution: 3.08 Å
EM Method: Single-particle
Fitted PDBs: 9pfr
Q-score: 0.519

Cao D, Chen Z, Gao Y, Roesler C, Gooneratne I, Mera C, Zhuang L, Slack J, Nudell-Cook E, Vy J, Berry J, Royal M, Shaik M, Youngs R, Liang B

Nat Commun (2026) [ Pubmed: 42049741 DOI: doi:10.1038/s41467-026-72519-0 ]

EMD-71612
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3D View
Cryo-EM structure of the respiratory syncytial virus polymerase L:P in pre-reaction elongation state
CryoEM
Release date: May 6, 2026
Resolution: 2.75 Å
EM Method: Single-particle
Fitted PDBs: 9pfs
Q-score: 0.562

Cao D, Chen Z, Gao Y, Roesler C, Gooneratne I, Mera C, Zhuang L, Slack J, Nudell-Cook E, Vy J, Berry J, Royal M, Shaik M, Youngs R, Liang B

Nat Commun (2026) [ Pubmed: 42049741 DOI: doi:10.1038/s41467-026-72519-0 ]

EMD-71613
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3D View
Cryo-EM structure of the respiratory syncytial virus polymerase L:P in pre-translocation elongation state
CryoEM
Release date: May 6, 2026
Resolution: 3.07 Å
EM Method: Single-particle
Fitted PDBs: 9pft
Q-score: 0.545

Cao D, Chen Z, Gao Y, Roesler C, Gooneratne I, Mera C, Zhuang L, Slack J, Nudell-Cook E, Vy J, Berry J, Royal M, Shaik M, Youngs R, Liang B

Nat Commun (2026) [ Pubmed: 42049741 DOI: doi:10.1038/s41467-026-72519-0 ]

EMD-71614
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3D View
Cryo-EM structure of the respiratory syncytial virus polymerase L:P in post-translocation elongation state
CryoEM
Release date: May 6, 2026
Resolution: 3.54 Å
EM Method: Single-particle
Fitted PDBs: 9pfu
Q-score: 0.45

Cao D, Chen Z, Gao Y, Roesler C, Gooneratne I, Mera C, Zhuang L, Slack J, Nudell-Cook E, Vy J, Berry J, Royal M, Shaik M, Youngs R, Liang B

Nat Commun (2026) [ Pubmed: 42049741 DOI: doi:10.1038/s41467-026-72519-0 ]

EMD-45754
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The cryo-EM structure of BamACDE complex from Neisseria gonorrhoeae
CryoEM
Release date: Sept. 3, 2025
Resolution: 4.0 Å
EM Method: Single-particle
Fitted PDBs: 9cmw
Q-score: 0.387

Billings E, Fan Z, Sooreshjani MA, Gumbart JC, Noinaj N

Structure (2025) 33 pp. 1893- [ Pubmed: 40902586 DOI: doi:10.1016/j.str.2025.08.009 ]

EMD-45755
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The cryo-EM structure of BamADE subcomplex from Neisseria gonorrhoeae
CryoEM
Release date: Sept. 3, 2025
Resolution: 6.3 Å
EM Method: Single-particle
Fitted PDBs: 9cn0
Q-score: 0.221

Billings E, Fan Z, Sooreshjani MA, Gumbart JC, Noinaj N

Structure (2025) 33 pp. 1893- [ Pubmed: 40902586 DOI: doi:10.1016/j.str.2025.08.009 ]

EMD-45756
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3D View
The cryo-EM structure of BamAD subcomplex from Neisseria gonorrhoeae
CryoEM
Release date: Sept. 3, 2025
Resolution: 5.0 Å
EM Method: Single-particle
Fitted PDBs: 9cn1
Q-score: 0.226

Billings E, Fan Z, Sooreshjani MA, Gumbart JC, Noinaj N

Structure (2025) 33 pp. 1893- [ Pubmed: 40902586 DOI: doi:10.1016/j.str.2025.08.009 ]

EMD-44192
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3D View
Raw data
EMPIAR-12842 EMPIAR-12843
E. coli 70S ribosome complex N1-methylated 16S A1408 arbekacin
CryoEM
Release date: Aug. 27, 2025
Resolution: 2.2 Å
EM Method: Single-particle
Fitted PDBs: 9b4z
Q-score: 0.595

Dey D, Mattingly JM, Zelinskaya N, Dunham CM, Conn GL

Nat Commun (2025) 16 pp. 7992-7992 [ Pubmed: 40866347 DOI: doi:10.1038/s41467-025-63278-5 ]

EMD-44193
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E. coli 70S ribosome complex unmethylated 16S A1408 arbekacin
CryoEM
Release date: Aug. 27, 2025
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 9b50
Q-score: 0.575

Dey D, Mattingly JM, Zelinskaya N, Dunham CM, Conn GL

Nat Commun (2025) 16 pp. 7992-7992 [ Pubmed: 40866347 DOI: doi:10.1038/s41467-025-63278-5 ]

EMD-44194
Download Map
3D View
Raw data
EMPIAR-12844
E. coli 70S ribosome complex N1-methylated 16S A1408 G418
CryoEM
Release date: Aug. 27, 2025
Resolution: 2.4 Å
EM Method: Single-particle
Fitted PDBs: 9b51
Q-score: 0.596

Dey D, Mattingly JM, Zelinskaya N, Dunham CM, Conn GL

Nat Commun (2025) 16 pp. 7992-7992 [ Pubmed: 40866347 DOI: doi:10.1038/s41467-025-63278-5 ]

Sort by: Download
Showing 1 - 10 of 14. Page 1 of 2
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [14]

Current status

  • REL [14]

Sample type

  • Complex [13]
  • Protein [12]
  • RNA [9]
  • Ligand [5]
  • Cellular component [1]

Organism

  • Human respiratory syncytial virus [6]
  • Neisseria gonorrhoeae [3]
  • Escherichia coli [3]
  • Escherichia phage ecszw-2 [1]
  • Neisseria gonorrhoeae [1]
  • Bos taurus [1]

EM Method

  • Single-particle [13]
  • Tomography [1]

Resolution

  • ≥ 2Å and < 3Å [4]
  • ≥ 3Å and < 4Å [6]
  • ≥ 4Å and < 5Å [1]
  • ≥ 5Å and < 6Å [1]
  • ≥ 6Å and < 8Å [1]

Model molecular weight

  • 100-250 kDa [3]
  • 250-500 kDa [6]
  • 2-5 MDa [3]

Release Date

  • 2026 [4]
  • 2025 [6]
  • 2023 [3]
  • 2022 [1]

Author by name

  • Cao D [6]
  • Chen Z [6]
  • Gao Y [6]
  • Gooneratne I [6]
  • Liang B [6]
  • Mera C [6]
  • Roesler C [6]
  • Berry J [4]
  • Nudell-cook E [4]
  • Royal M [4]
  • Shaik M [4]
  • Slack J [4]
  • Vy J [4]
  • Youngs R [4]
  • Zhuang L [4]
  • Billings E [3]
  • Billings EM [3]
  • Conn GL [3]
  • Dey D [3]
  • Dunham CM [3]
  • Fan Z [3]
  • Gumbart JC [3]
  • Mattingly JM [3]
  • Noinaj N [3]
  • Sooreshjani MA [3]
  • Wang Q [3]
  • Zelinskaya N [3]
  • Antonova A [2]
  • D Cunha P [2]
  • Katta D [2]
  • Lemons W [2]
  • Ramanathan A [2]
  • Rice S [2]
  • Romanelli S [2]
  • Carragher B [1]
  • Cross S [1]
  • Jiang Q-X [1]
  • Jiang QX [1]
  • Koehler CM [1]
  • Lee D [1]
  • Li S [1]
  • Liang W [1]
  • Liang WG [1]
  • Lin King Jv [1]
  • Liu C [1]
  • Mancl JM [1]
  • Mo S [1]
  • Noble AJ [1]
  • Ouwendijk J [1]
  • Pan M [1]
  • Potter CS [1]
  • Qin F [1]
  • Tang WJ [1]
  • Verkade P [1]
  • Wang H [1]
  • Wei H [1]
  • Wijaya J [1]
  • Yadav GP [1]
  • Zhao M [1]
  • Zhu MX [1]

Author by ORCID

  • Gao Y [6]
  • Cao D [6]
  • Liang B [6]
  • Gooneratne I [6]
  • Chen Z [4]
  • Dey D [3]
  • Conn GL [3]
  • Billings E [3]
  • Dunham CM [3]
  • Zelinskaya N [3]
  • Mattingly JM [3]
  • Katta D [2]
  • Zhao M [1]
  • Wei H [1]
  • Pan M [1]
  • Lee D [1]
  • Noble AJ [1]
  • Liu C [1]
  • Carragher B [1]
  • Verkade P [1]
  • Yadav GP [1]
  • Zhu MX [1]
  • Tang WJ [1]
  • Li S [1]
  • Cross S [1]

Journal

  • NAT COMMUN [8]
  • STRUCTURE [3]
  • NATURE [2]
  • FRONT MOL NEUROSCI [1]

Software

  • COOT [4]
  • CRYOSPARC [4]
  • CTFFIND [3]
  • RELION [3]
  • PHENIX [1]
  • TOMO3D [1]
  • UCSF CHIMERAX [1]

Microscope

  • FEI TITAN KRIOS [7]
  • TFS KRIOS [7]

Electron Source

  • FIELD EMISSION GUN [14]

Film or detector model

  • GATAN K3 6K X 4K [9]
  • GATAN K3 BIOQUANTUM 6K X 4K [2]
  • TFS FALCON 4I 4K X 4K [2]
  • GATAN K2 QUANTUM 4K X 4K [1]

External links

  • PDB [14]
  • PDBe-Kb [12]
  • UniProt [12]
  • Gene Ontology [8]
  • InterPro [8]
  • AlphaFold DB [6]
  • Pfam [6]
  • ChEBI [5]
  • DrugBank [5]
  • ChEMBL [3]
  • EMPIAR [3]