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grant_code:"GM128656"

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Current Database

  • EMDB [16]

Current status

  • REL [16]

Sample type

  • Complex [16]
  • Ligand [15]
  • Protein [15]
  • RNA [15]

Organism

  • Escherichia coli [16]
  • Streptomyces virginiae [1]
  • Escherichia coli [1]

EM Method

  • Single-particle [16]

Resolution

  • < 2Å [2]
  • ≥ 2Å and < 3Å [14]

Model molecular weight

  • 1-2 MDa [15]

Release Date

  • 2023 [15]
  • 2022 [1]

Author by name

  • Fraser JS [16]
  • Lee DJ [16]
  • Pellegrino J [16]
  • Seiple IB [16]
  • Yeon SK [6]
  • Boyce JH [3]
  • Ecker AK [3]
  • Edmonson Q [2]
  • Li Q [2]
  • Takahashi Y [2]

Author by ORCID

  • Fraser JS [16]
  • Lee DJ [16]
  • Pellegrino J [16]
  • Seiple IB [16]
  • Yeon SK [6]
  • Ecker AK [3]
  • Boyce JH [3]
  • Takahashi Y [2]
  • Li Q [2]

Journal

  • TO BE PUBLISHED [16]

Microscope

  • FEI TITAN KRIOS [16]

Electron Source

  • FIELD EMISSION GUN [16]

Film or detector model

  • GATAN K3 BIOQUANTUM 6K X 4K [15]
  • GATAN K3 6K X 4K [1]

External links

  • EMPIAR [16]
  • PDB [16]
  • AlphaFold DB [15]
  • Gene Ontology [15]
  • InterPro [15]
  • PDBe-Kb [15]
  • Pfam [15]
  • UniProt [15]
  • ChEBI [5]
  • ChEMBL [5]
  • DrugBank [5]
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Showing 1 - 10 of 16. Page 1 of 2
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EMD-27852
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Raw data
EMPIAR-11150
E. coli 50S ribosome bound to compound streptogramin A analog 3142
CryoEM
Release date: June 28, 2023
Resolution: 1.91 Å
EM Method: Single-particle
Fitted PDBs: 8e30
Q-score: 0.629

Li Q, Pellegrino J, Lee DJ, Fraser JS, Seiple IB

To Be Published

EMD-27854
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Raw data
EMPIAR-11146
E. coli 50S ribosome bound to compound streptogramin analogs SA1 and SB1
CryoEM
Release date: June 28, 2023
Resolution: 2.35 Å
EM Method: Single-particle
Fitted PDBs: 8e32
Q-score: 0.609

Takahashi Y, Pellegrino J, Lee DJ, Fraser JS, Seiple IB

To Be Published

EMD-27855
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Raw data
EMPIAR-11147
E. coli 50S ribosome bound to compound streptogramin analog SAB001
CryoEM
Release date: June 28, 2023
Resolution: 2.23 Å
EM Method: Single-particle
Fitted PDBs: 8e33
Q-score: 0.602

Takahashi Y, Pellegrino J, Lee DJ, Fraser JS, Seiple IB

To Be Published

EMD-27858
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Raw data
EMPIAR-11151
E. coli 50S ribosome bound to compound streptogramin A analog 3146
CryoEM
Release date: June 28, 2023
Resolution: 2.38 Å
EM Method: Single-particle
Fitted PDBs: 8e36
Q-score: 0.57

Li Q, Pellegrino J, Lee DJ, Seiple IB, Fraser JS

To Be Published

EMD-27867
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Raw data
EMPIAR-11152
E. coli 50S ribosome bound to D-linker solithromycin conjugate
CryoEM
Release date: June 28, 2023
Resolution: 2.35 Å
EM Method: Single-particle
Fitted PDBs: 8e3l
Q-score: 0.601

Boyce JH, Pellegrino J, Lee DJ, Ecker AK, Seiple IB, Fraser JS

To Be Published

EMD-27868
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Raw data
EMPIAR-11153
E. coli 50S ribosome bound to L-linker solithromycin conjugate
CryoEM
Release date: June 28, 2023
Resolution: 2.25 Å
EM Method: Single-particle
Fitted PDBs: 8e3m
Q-score: 0.604

Boyce JH, Pellegrino J, Lee DJ, Ecker AK, Seiple IB, Fraser JS

To Be Published

EMD-27869
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Raw data
EMPIAR-11154
E. coli 50S ribosome bound to solithromycin and VM1
CryoEM
Release date: June 28, 2023
Resolution: 1.99 Å
EM Method: Single-particle
Fitted PDBs: 8e3o
Q-score: 0.618

Boyce JH, Pellegrino J, Lee DJ, Ecker AK, Seiple IB, Fraser JS

To Be Published

EMD-27876
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Raw data
EMPIAR-11164
E. coli 50S ribosome bound to tiamulin and VS1
CryoEM
Release date: June 28, 2023
Resolution: 2.13 Å
EM Method: Single-particle
Fitted PDBs: 8e41
Q-score: 0.611

Edmonson Q, Pellegrino J, Lee DJ, Seiple IB, Fraser JS

To Be Published

EMD-27877
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Raw data
EMPIAR-11165
E. coli 50S ribosome bound to tiamulin and azithromycin
CryoEM
Release date: June 28, 2023
Resolution: 2.29 Å
EM Method: Single-particle
Fitted PDBs: 8e42
Q-score: 0.604

Edmonson Q, Pellegrino J, Lee DJ, Seiple IB, Fraser JS

To Be Published

EMD-27879
Download Map
3D View
Raw data
EMPIAR-11158
E. coli 50S ribosome bound to antibiotic analog SLC09
CryoEM
Release date: June 28, 2023
Resolution: 2.53 Å
EM Method: Single-particle
Fitted PDBs: 8e44
Q-score: 0.582

Yeon SK, Pellegrino J, Lee DJ, Seiple IB, Fraser JS

To Be Published

Sort by: Download
Showing 1 - 10 of 16. Page 1 of 2
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [16]

Current status

  • REL [16]

Sample type

  • Complex [16]
  • Ligand [15]
  • Protein [15]
  • RNA [15]

Organism

  • Escherichia coli [16]
  • Streptomyces virginiae [1]
  • Escherichia coli [1]

EM Method

  • Single-particle [16]

Resolution

  • < 2Å [2]
  • ≥ 2Å and < 3Å [14]

Model molecular weight

  • 1-2 MDa [15]

Release Date

  • 2023 [15]
  • 2022 [1]

Author by name

  • Fraser JS [16]
  • Lee DJ [16]
  • Pellegrino J [16]
  • Seiple IB [16]
  • Yeon SK [6]
  • Boyce JH [3]
  • Ecker AK [3]
  • Edmonson Q [2]
  • Li Q [2]
  • Takahashi Y [2]

Author by ORCID

  • Fraser JS [16]
  • Lee DJ [16]
  • Pellegrino J [16]
  • Seiple IB [16]
  • Yeon SK [6]
  • Ecker AK [3]
  • Boyce JH [3]
  • Takahashi Y [2]
  • Li Q [2]

Journal

  • TO BE PUBLISHED [16]

Microscope

  • FEI TITAN KRIOS [16]

Electron Source

  • FIELD EMISSION GUN [16]

Film or detector model

  • GATAN K3 BIOQUANTUM 6K X 4K [15]
  • GATAN K3 6K X 4K [1]

External links

  • EMPIAR [16]
  • PDB [16]
  • AlphaFold DB [15]
  • Gene Ontology [15]
  • InterPro [15]
  • PDBe-Kb [15]
  • Pfam [15]
  • UniProt [15]
  • ChEBI [5]
  • ChEMBL [5]
  • DrugBank [5]