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grant_code:"81520108019"

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Current Database

  • EMDB [74]

Current status

  • REL [74]

Sample type

  • Complex [69]
  • Protein [61]
  • Ligand [36]
  • RNA [5]
  • Virus [5]

Organism

  • Homo sapiens [26]
  • Mycolicibacterium smegmatis [16]
  • Mycobacterium tuberculosis [13]
  • Mycobacterium tuberculosis [9]
  • Severe acute respiratory syndrome coronavirus [7]
  • Foot-and-mouth disease virus [5]
  • Hepatitis b virus [5]
  • Mycolicibacterium smegmatis [4]

EM Method

  • Single-particle [74]

Resolution

  • < 2Å [1]
  • ≥ 2Å and < 3Å [30]
  • ≥ 3Å and < 4Å [35]
  • ≥ 4Å and < 5Å [1]
  • ≥ 5Å and < 6Å [2]
  • ≥ 6Å and < 8Å [2]
  • ≥ 8Å and < 12Å [3]

Model molecular weight

  • 50-100 kDa [5]
  • 100-250 kDa [23]
  • 250-500 kDa [11]
  • 500-1000 kDa [12]
  • 1-2 MDa [2]
  • 2-5 MDa [1]

Release Date

  • 2026 [2]
  • 2024 [21]
  • 2023 [26]
  • 2022 [1]
  • 2021 [7]
  • 2020 [16]
  • 2018 [1]

Author by name

  • Rao Z [72]
  • Gao Y [67]
  • Guddat LW [63]
  • Liu F [51]
  • Gong H [46]
  • Yang X [45]
  • Zhang Y [45]
  • Lai Y [44]
  • Zhou S [39]
  • Xu J [36]
  • Yu L [34]
  • Feng Z [33]
  • Zhao Z [33]
  • Wang Q [26]
  • Tang Y [24]
  • Du Z [23]
  • Wang W [23]
  • Yang H [21]
  • Chen H [19]
  • Ran T [19]
  • Li L [16]
  • Pang Y [16]
  • Shi K [16]
  • Wang J [16]
  • Xu W [16]
  • Zhang B [15]
  • Mu A [13]
  • Lou Z [12]
  • Hu T [11]
  • Liu Z [11]
  • Ji W [10]
  • Rao ZH [10]
  • Zhu Y [10]
  • Li J [9]
  • Liang J [9]
  • Wang H [8]
  • Zhang L [8]
  • Zhao Y [8]
  • Cao L [7]
  • Gao R [7]
  • Wang T [7]
  • Batt SM [6]
  • Besra GS [6]
  • Bi L [6]
  • Ge J [6]
  • Gurcha SS [6]
  • Huang Y [6]
  • Li X [6]
  • Sun Q [6]
  • Veerapen N [6]
  • Yan L [6]
  • Zhang X [6]
  • Zhao W [6]
  • Zhou X [6]
  • Zhu C [6]
  • Fang X [5]
  • Fu S [5]
  • Gong P [5]
  • Hu Z [5]
  • Jiang B [5]
  • Li S [5]
  • Liu Q [5]
  • Sun S [5]
  • Wang M [5]
  • Wang P [5]
  • Wang X [5]
  • Wu J [5]
  • Xiong Z [5]
  • Zhang W [5]
  • Bai F [4]
  • Gao H [4]
  • Gong HR [4]
  • Qin L [4]
  • Ran Y [4]
  • Ren P [4]
  • Wang Y [4]
  • Wu C [4]
  • Wu F [4]
  • Wu L [4]
  • Zhang Q [4]
  • Gao RG [3]
  • Li D [3]
  • Lin J [3]
  • Tang YT [3]
  • Besra KK [2]
  • Hua T [2]
  • Ming Z [2]
  • Zheng L [2]
  • Ji WX [1]
  • Jia M [1]
  • Li R [1]
  • Liu Y [1]
  • Man Lam S [1]
  • Robinson CV [1]
  • Shui G [1]
  • Sun F [1]
  • Sun Y [1]
  • Tian C [1]
  • Wang PP [1]
  • Wang S [1]

Author by ORCID

  • Liu F [43]
  • Gong H [40]
  • Guddat LW [34]
  • Gao Y [27]
  • Lai Y [23]
  • Rao Z [22]
  • Ran T [19]
  • Mu A [13]
  • Wang Q [12]
  • Zhang B [10]
  • Yang H [10]
  • Ji W [10]
  • Hu T [10]
  • Xu W [8]
  • Liang J [8]
  • Tang Y [7]
  • Wang T [7]
  • Yang X [7]
  • Lou Z [7]
  • Yang X [7]
  • Zhou X [6]
  • Cao L [5]
  • Wang X [5]
  • Fu S [5]
  • Hu Z [5]
  • Wang P [5]
  • Sun S [4]
  • Ren P [4]
  • Ran Y [4]
  • Xiong Z [4]
  • Bai F [4]
  • Zhou S [3]
  • Chen H [3]
  • Gao Y [3]
  • Li J [3]
  • Sun Q [2]
  • Wang H [2]
  • Zhao Y [2]
  • Yan L [2]
  • Batt SM [2]
  • Veerapen N [2]
  • Robinson CV [1]
  • Yang C [1]
  • Rao ZH [1]
  • Sun F [1]
  • Shui G [1]
  • Xu A [1]
  • Li R [1]
  • Wang S [1]
  • Yu L [1]
  • Wong LL [1]
  • Wang PP [1]

Journal

  • MOL CELL [21]
  • NATURE [16]
  • SCIENCE [12]
  • PROTEIN CELL [6]
  • CELL [4]
  • SCI ADV [4]
  • ELIFE [3]
  • PNAS [3]
  • TO BE PUBLISHED [3]
  • CELL REP [1]
  • STRUCTURE [1]

Software

  • CRYOSPARC [37]
  • RELION [8]
  • GCTF [2]

Microscope

  • FEI TITAN KRIOS [67]
  • FEI TITAN [5]
  • TFS KRIOS [2]

Electron Source

  • FIELD EMISSION GUN [74]

Film or detector model

  • FEI FALCON IV 4K X 4K [39]
  • GATAN K3 6K X 4K [18]
  • GATAN K2 QUANTUM 4K X 4K [10]
  • GATAN K2 SUMMIT 4K X 4K [6]
  • GATAN K3 BIOQUANTUM 6K X 4K [1]

External links

  • PDB [74]
  • UniProt [60]
  • PDBe-Kb [55]
  • AlphaFold DB [54]
  • InterPro [49]
  • Pfam [48]
  • Gene Ontology [47]
  • ChEBI [34]
  • DrugBank [31]
  • ChEMBL [30]
  • Complex Portal [16]
  • SCOP2 [4]
Sort by: Download
Showing 1 - 10 of 74. Page 1 of 8
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EMD-62552
Download Map
3D View
Cryo-EM structure of the family 2A encapsulin from Mycolicibacterium smegmatis
CryoEM
Release date: June 3, 2026
Resolution: 1.81 Å
EM Method: Single-particle
Fitted PDBs: 9ksl
Q-score: 0.726

Mu A, Wang PP, Wang Q, Rao ZH

To Be Published

EMD-62241
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3D View
The Cryo-EM structure of human succinate dehydrogenase in complex with Benzovindiflupyr
CryoEM
Release date: May 6, 2026
Resolution: 2.65 Å
EM Method: Single-particle
Fitted PDBs: 9kc4
Q-score: 0.627

Liu Y, Gong H

To Be Published

EMD-39395
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3D View
Cryo-EM structure of Hepatitis B virus surface antigen subviral particle with D2 symmetry
CryoEM
Release date: Sept. 18, 2024
Resolution: 6.6 Å
EM Method: Single-particle
Fitted PDBs: 8ymj
Q-score: 0.233

Wang Q, Wang T, Cao L, Mu A, Fu S, Wang P, Gao Y, Ji W, Liu Z, Du Z, Guddat LW, Zhang W, Li S, Li X, Lou Z, Wang X, Hu Z, Rao Z

Science (2024) 385 pp. 1217-1224 [ DOI: doi:10.1126/science.adp1453 Pubmed: 39264996 ]

EMD-39396
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Localized reconstruction of Hepatitis B virus surface antigen dimer in the subviral particle with D2 symmetry from dataset A0
CryoEM
Release date: Sept. 18, 2024
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 8ymk
Q-score: 0.242

Wang Q, Wang T, Cao L, Mu A, Fu S, Wang P, Gao Y, Ji W, Liu Z, Du Z, Guddat LW, Zhang W, Li S, Li X, Lou Z, Wang X, Hu Z, Rao Z

Science (2024) 385 pp. 1217-1224 [ DOI: doi:10.1126/science.adp1453 Pubmed: 39264996 ]

EMD-39397
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Cryo-EM structure of Hepatitis B virus surface antigen subviral particle with D4 symmetry
CryoEM
Release date: Sept. 18, 2024
Resolution: 8.5 Å
EM Method: Single-particle

Wang Q, Wang T, Cao L, Mu A, Fu S, Wang P, Gao Y, Ji W, Liu Z, Du Z, Guddat LW, Zhang W, Li S, Li X, Lou Z, Wang X, Hu Z, Rao Z

Science (2024) 385 pp. 1217-1224 [ DOI: doi:10.1126/science.adp1453 Pubmed: 39264996 ]

EMD-39404
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3D View
Localized reconstruction of Hepatitis B virus surface antigen dimer in the subviral particle with D2 symmetry from dataset A
CryoEM
Release date: Sept. 18, 2024
Resolution: 3.7 Å
EM Method: Single-particle

Wang Q, Wang T, Cao L, Mu A, Fu S, Wang P, Gao Y, Ji W, Liu Z, Du Z, Guddat LW, Zhang W, Li S, Li X, Lou Z, Wang X, Hu Z, Rao Z

Science (2024) 385 pp. 1217-1224 [ DOI: doi:10.1126/science.adp1453 Pubmed: 39264996 ]

EMD-60451
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3D View
Cryo-EM structure of Hepatitis B virus surface antigen subviral particle ellipsoidal shape with C1 symmetry
CryoEM
Release date: Sept. 18, 2024
Resolution: 10.23 Å
EM Method: Single-particle

Wang Q, Wang T, Cao L, Mu A, Fu S, Wang P, Gao Y, Ji W, Liu Z, Du Z, Guddat LW, Zhang W, Li S, Li X, Lou Z, Wang X, Hu Z, Rao Z

Science (2024) 385 pp. 1217-1224 [ DOI: doi:10.1126/science.adp1453 Pubmed: 39264996 ]

EMD-35909
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Cryo-EM structure of Mycobacterium tuberculosis ATP synthase in complex with bedaquiline BDQ
CryoEM
Release date: May 22, 2024
Resolution: 2.58 Å
EM Method: Single-particle
Fitted PDBs: 8j0s
Q-score: 0.592

Zhang Y, Lai Y, Zhou S, Ran T, Zhang Y, Zhao Z, Feng Z, Yu L, Xu J, Shi K, Wang J, Pang Y, Li L, Chen H, Guddat LW, Gao Y, Liu F, Rao Z, Gong H

Nature (2024) 631 pp. 409-414 [ DOI: doi:10.1038/s41586-024-07605-8 Pubmed: 38961288 ]

EMD-35911
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Cryo-EM structure of Mycobacterium tuberculosis ATP synthase in the apo-form
CryoEM
Release date: May 22, 2024
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 8j0t
Q-score: 0.543

Zhang Y, Lai Y, Zhou S, Ran T, Zhang Y, Zhao Z, Feng Z, Yu L, Xu J, Shi K, Wang J, Pang Y, Li L, Chen H, Guddat LW, Gao Y, Liu F, Rao Z, Gong H

Nature (2024) 631 pp. 409-414 [ DOI: doi:10.1038/s41586-024-07605-8 Pubmed: 38961288 ]

EMD-35982
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3D View
Cryo-EM structure of Mycobacterium tuberculosis ATP synthase Fo in complex with bedaquiline BDQ
CryoEM
Release date: May 1, 2024
Resolution: 2.85 Å
EM Method: Single-particle
Fitted PDBs: 8j57
Q-score: 0.574

Zhang Y, Lai Y, Zhou S, Ran T, Zhang Y, Zhao Z, Feng Z, Yu L, Xu J, Shi K, Wang J, Pang Y, Li L, Chen H, Guddat LW, Gao Y, Liu F, Rao Z, Gong H

Nature (2024) 631 pp. 409-414 [ DOI: doi:10.1038/s41586-024-07605-8 Pubmed: 38961288 ]

Sort by: Download
Showing 1 - 10 of 74. Page 1 of 8
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [74]

Current status

  • REL [74]

Sample type

  • Complex [69]
  • Protein [61]
  • Ligand [36]
  • RNA [5]
  • Virus [5]

Organism

  • Homo sapiens [26]
  • Mycolicibacterium smegmatis [16]
  • Mycobacterium tuberculosis [13]
  • Mycobacterium tuberculosis [9]
  • Severe acute respiratory syndrome coronavirus [7]
  • Foot-and-mouth disease virus [5]
  • Hepatitis b virus [5]
  • Mycolicibacterium smegmatis [4]

EM Method

  • Single-particle [74]

Resolution

  • < 2Å [1]
  • ≥ 2Å and < 3Å [30]
  • ≥ 3Å and < 4Å [35]
  • ≥ 4Å and < 5Å [1]
  • ≥ 5Å and < 6Å [2]
  • ≥ 6Å and < 8Å [2]
  • ≥ 8Å and < 12Å [3]

Model molecular weight

  • 50-100 kDa [5]
  • 100-250 kDa [23]
  • 250-500 kDa [11]
  • 500-1000 kDa [12]
  • 1-2 MDa [2]
  • 2-5 MDa [1]

Release Date

  • 2026 [2]
  • 2024 [21]
  • 2023 [26]
  • 2022 [1]
  • 2021 [7]
  • 2020 [16]
  • 2018 [1]

Author by name

  • Rao Z [72]
  • Gao Y [67]
  • Guddat LW [63]
  • Liu F [51]
  • Gong H [46]
  • Yang X [45]
  • Zhang Y [45]
  • Lai Y [44]
  • Zhou S [39]
  • Xu J [36]
  • Yu L [34]
  • Feng Z [33]
  • Zhao Z [33]
  • Wang Q [26]
  • Tang Y [24]
  • Du Z [23]
  • Wang W [23]
  • Yang H [21]
  • Chen H [19]
  • Ran T [19]
  • Li L [16]
  • Pang Y [16]
  • Shi K [16]
  • Wang J [16]
  • Xu W [16]
  • Zhang B [15]
  • Mu A [13]
  • Lou Z [12]
  • Hu T [11]
  • Liu Z [11]
  • Ji W [10]
  • Rao ZH [10]
  • Zhu Y [10]
  • Li J [9]
  • Liang J [9]
  • Wang H [8]
  • Zhang L [8]
  • Zhao Y [8]
  • Cao L [7]
  • Gao R [7]
  • Wang T [7]
  • Batt SM [6]
  • Besra GS [6]
  • Bi L [6]
  • Ge J [6]
  • Gurcha SS [6]
  • Huang Y [6]
  • Li X [6]
  • Sun Q [6]
  • Veerapen N [6]
  • Yan L [6]
  • Zhang X [6]
  • Zhao W [6]
  • Zhou X [6]
  • Zhu C [6]
  • Fang X [5]
  • Fu S [5]
  • Gong P [5]
  • Hu Z [5]
  • Jiang B [5]
  • Li S [5]
  • Liu Q [5]
  • Sun S [5]
  • Wang M [5]
  • Wang P [5]
  • Wang X [5]
  • Wu J [5]
  • Xiong Z [5]
  • Zhang W [5]
  • Bai F [4]
  • Gao H [4]
  • Gong HR [4]
  • Qin L [4]
  • Ran Y [4]
  • Ren P [4]
  • Wang Y [4]
  • Wu C [4]
  • Wu F [4]
  • Wu L [4]
  • Zhang Q [4]
  • Gao RG [3]
  • Li D [3]
  • Lin J [3]
  • Tang YT [3]
  • Besra KK [2]
  • Hua T [2]
  • Ming Z [2]
  • Zheng L [2]
  • Ji WX [1]
  • Jia M [1]
  • Li R [1]
  • Liu Y [1]
  • Man Lam S [1]
  • Robinson CV [1]
  • Shui G [1]
  • Sun F [1]
  • Sun Y [1]
  • Tian C [1]
  • Wang PP [1]
  • Wang S [1]

Author by ORCID

  • Liu F [43]
  • Gong H [40]
  • Guddat LW [34]
  • Gao Y [27]
  • Lai Y [23]
  • Rao Z [22]
  • Ran T [19]
  • Mu A [13]
  • Wang Q [12]
  • Zhang B [10]
  • Yang H [10]
  • Ji W [10]
  • Hu T [10]
  • Xu W [8]
  • Liang J [8]
  • Tang Y [7]
  • Wang T [7]
  • Yang X [7]
  • Lou Z [7]
  • Yang X [7]
  • Zhou X [6]
  • Cao L [5]
  • Wang X [5]
  • Fu S [5]
  • Hu Z [5]
  • Wang P [5]
  • Sun S [4]
  • Ren P [4]
  • Ran Y [4]
  • Xiong Z [4]
  • Bai F [4]
  • Zhou S [3]
  • Chen H [3]
  • Gao Y [3]
  • Li J [3]
  • Sun Q [2]
  • Wang H [2]
  • Zhao Y [2]
  • Yan L [2]
  • Batt SM [2]
  • Veerapen N [2]
  • Robinson CV [1]
  • Yang C [1]
  • Rao ZH [1]
  • Sun F [1]
  • Shui G [1]
  • Xu A [1]
  • Li R [1]
  • Wang S [1]
  • Yu L [1]
  • Wong LL [1]
  • Wang PP [1]

Journal

  • MOL CELL [21]
  • NATURE [16]
  • SCIENCE [12]
  • PROTEIN CELL [6]
  • CELL [4]
  • SCI ADV [4]
  • ELIFE [3]
  • PNAS [3]
  • TO BE PUBLISHED [3]
  • CELL REP [1]
  • STRUCTURE [1]

Software

  • CRYOSPARC [37]
  • RELION [8]
  • GCTF [2]

Microscope

  • FEI TITAN KRIOS [67]
  • FEI TITAN [5]
  • TFS KRIOS [2]

Electron Source

  • FIELD EMISSION GUN [74]

Film or detector model

  • FEI FALCON IV 4K X 4K [39]
  • GATAN K3 6K X 4K [18]
  • GATAN K2 QUANTUM 4K X 4K [10]
  • GATAN K2 SUMMIT 4K X 4K [6]
  • GATAN K3 BIOQUANTUM 6K X 4K [1]

External links

  • PDB [74]
  • UniProt [60]
  • PDBe-Kb [55]
  • AlphaFold DB [54]
  • InterPro [49]
  • Pfam [48]
  • Gene Ontology [47]
  • ChEBI [34]
  • DrugBank [31]
  • ChEMBL [30]
  • Complex Portal [16]
  • SCOP2 [4]