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grant_code:"32241021"

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Current Database

  • EMDB [23]

Current status

  • REL [23]

Sample type

  • Complex [23]
  • Protein [22]
  • Ligand [16]
  • DNA [11]

Organism

  • Xenopus laevis [11]
  • Synthetic construct [8]
  • Mycobacterium tuberculosis [7]
  • Mycobacterium tuberculosis [7]
  • Homo sapiens [7]
  • Saccharomyces cerevisiae [6]
  • Bos mutus grunniens [3]
  • Saccharomyces cerevisiae [3]
  • (no species) [2]
  • (no species) [1]
  • Escherichia coli [1]
  • Drosophila melanogaster [1]

EM Method

  • Single-particle [23]

Resolution

  • ≥ 2Å and < 3Å [11]
  • ≥ 3Å and < 4Å [10]
  • ≥ 4Å and < 5Å [1]
  • ≥ 5Å and < 6Å [1]

Model molecular weight

  • 100-250 kDa [3]
  • 250-500 kDa [6]
  • 500-1000 kDa [13]

Release Date

  • 2026 [7]
  • 2025 [9]
  • 2023 [7]

Author by name

  • He J [23]
  • Wang C [14]
  • Li H [13]
  • Zhang Y [13]
  • Zou B [13]
  • Guan J [10]
  • Zhao H [10]
  • Chao WCH [9]
  • Dong S [9]
  • Zhang H [9]
  • Burston SG [7]
  • Chen X [7]
  • Fang C [7]
  • Gao X [7]
  • Gao Y [7]
  • Hu J [7]
  • Huang J [7]
  • Huang X [7]
  • Li M [7]
  • Li W [7]
  • Li Z [7]
  • Liu B [7]
  • Mulholland AJ [7]
  • Oliveira ASF [7]
  • Rasheed N [7]
  • Shi X [7]
  • Spencer J [7]
  • Su N [7]
  • Wang J [7]
  • Wang M [7]
  • Wang X [7]
  • Wong KH [7]
  • Xiong X [7]
  • Yuan H [7]
  • Zhang J [7]
  • Zhang T [7]
  • Zhang X [7]
  • Zhao Y [7]
  • Zhou B [7]
  • Zhou M [7]
  • Zhou N [7]
  • Pei D [6]
  • Qin D [6]
  • Sun F [5]
  • Chen J [4]
  • Luo Q [4]
  • Xu C [4]
  • Xu P [4]
  • Zhang N [3]
  • Zhou Y [3]
  • Chao W [2]
  • Chen W [2]
  • Guan JL [2]
  • Li Q [2]
  • Liu C [2]
  • Liu CQ [2]
  • Liu D [2]
  • Lu G [2]
  • Ma C [2]
  • Wang S [2]
  • Xie Y [2]
  • Yang X [2]
  • Yi L [2]
  • Zheng X [2]
  • Zhou X [2]
  • Chang X [1]
  • Jun H [1]
  • Meilin W [1]
  • Shuai W [1]
  • Zheng H [1]

Author by ORCID

  • He J [17]
  • Zhang X [7]
  • Chao WCH [7]
  • Rasheed N [7]
  • Chen J [4]
  • Zhang T [2]
  • Li Q [2]
  • Oliveira ASF [2]
  • Liu C [2]
  • Chen X [2]
  • Spencer J [2]
  • Xiong X [2]
  • Wang S [2]
  • Ma C [2]
  • Fang C [2]
  • Mulholland AJ [2]
  • Burston SG [2]
  • Gao Y [2]
  • Guan J [2]
  • Hu J [2]
  • Zheng X [2]
  • Liu D [2]

Journal

  • NAT COMMUN [9]
  • CELL RES [7]
  • NUCLEIC ACIDS RES [6]
  • ISCIENCE [1]

Software

  • CRYOSPARC [8]

Microscope

  • TFS KRIOS [15]
  • FEI TITAN KRIOS [6]
  • FEI TALOS ARCTICA [2]

Electron Source

  • FIELD EMISSION GUN [23]

Film or detector model

  • FEI FALCON IV 4K X 4K [21]
  • GATAN K3 6K X 4K [1]
  • GATAN K3 BIOQUANTUM 6K X 4K [1]

External links

  • PDB [23]
  • AlphaFold DB [22]
  • PDBe-Kb [22]
  • UniProt [22]
  • Pfam [21]
  • Gene Ontology [17]
  • ChEBI [16]
  • ChEMBL [16]
  • DrugBank [16]
  • InterPro [15]
  • Complex Portal [9]
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Showing 1 - 10 of 23. Page 1 of 3
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EMD-64742
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3D View
Cryo-EM structure of the histone deacetylase complex Rpd3L in complex with di-nucleosome
CryoEM
Release date: May 27, 2026
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 9v2w
Q-score: 0.362

Zhao H, Li H, Wang C, Yang X, Zou B, Dong S, Zhang N, Zhou Y, Yi L, Zhang Y, Xie Y, Qin D, Chao WCH, Pei D, He J

Nucleic Acids Res (2026) 54 [ DOI: doi:10.1093/nar/gkag443 Pubmed: 42152683 ]

EMD-64578
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local ARP-NCP structure of the ncBAF-nucleosome complex in the apo state
CryoEM
Release date: May 6, 2026
Resolution: 3.28 Å
EM Method: Single-particle
Fitted PDBs: 9uxa
Q-score: 0.385

Sun F, Zou B, Li H, Xu C, Luo Q, Wang C, Xu P, Pei D, Chen J, Qin D, Zhang Y, He J

Nucleic Acids Res (2026) 54 [ DOI: doi:10.1093/nar/gkag092 Pubmed: 41657245 ]

EMD-64579
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The apo density map of BCL7B-containing ARP module of the human SWI/SNF complex
CryoEM
Release date: May 6, 2026
Resolution: 2.92 Å
EM Method: Single-particle
Fitted PDBs: 9uxb
Q-score: 0.528

Sun F, Zou B, Li H, Xu C, Luo Q, Wang C, Xu P, Pei D, Chen J, Qin D, Zhang Y, He J

Nucleic Acids Res (2026) 54 [ DOI: doi:10.1093/nar/gkag092 Pubmed: 41657245 ]

EMD-64580
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The ADP-bound density map of BCL7B-containing ARP module of the human SWI/SNF complex
CryoEM
Release date: May 6, 2026
Resolution: 2.74 Å
EM Method: Single-particle
Fitted PDBs: 9uxc
Q-score: 0.442

Sun F, Zou B, Li H, Xu C, Luo Q, Wang C, Xu P, Pei D, Chen J, Qin D, Zhang Y, He J

Nucleic Acids Res (2026) 54 [ DOI: doi:10.1093/nar/gkag092 Pubmed: 41657245 ]

EMD-64741
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Cryo-EM structure of the histone deacetylase complex Rpd3L in complex with mono-nucleosome
CryoEM
Release date: May 6, 2026
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 9v2v
Q-score: 0.384

Zhao H, Li H, Wang C, Yang X, Zou B, Dong S, Zhang N, Zhou Y, Yi L, Zhang Y, Xie Y, Qin D, Chao WCH, Pei D, He J

Nucleic Acids Res (2026) 54 [ DOI: doi:10.1093/nar/gkag443 Pubmed: 42152683 ]

EMD-64577
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local ATPase-NCP density map of the ncBAF-nucleosome complex in the ADP-BeFx-bound state
CryoEM
Release date: March 18, 2026
Resolution: 3.05 Å
EM Method: Single-particle
Fitted PDBs: 9ux9
Q-score: 0.299

Sun F, Zou B, Li H, Xu C, Luo Q, Wang C, Xu P, Pei D, Chen J, Qin D, Zhang Y, He J

Nucleic Acids Res (2026) 54 [ DOI: doi:10.1093/nar/gkag092 Pubmed: 41657245 ]

EMD-64748
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Calypso/Asx/NCP-ub complex
CryoEM
Release date: March 18, 2026
Resolution: 5.9 Å
EM Method: Single-particle
Fitted PDBs: 9v33
Q-score: 0.241

Wang C, Sun F, Zhao H, Zhang N, Guan J, Zhou Y, Shuai W, Zheng H, He J

iScience (2026) 29 pp. 114958-114958 [ DOI: doi:10.1016/j.isci.2026.114958 Pubmed: 41782825 ]

EMD-63239
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Munc13-4-Rab27a complex consensus map
CryoEM
Release date: Dec. 3, 2025
Resolution: 3.42 Å
EM Method: Single-particle

Liu C, Liu D, Zheng X, Guan J, Zhou X, Zhang H, Wang S, Li Q, Lu G, He J, Ma C

Nat Commun (2025) 16 pp. 9080-9080 [ Pubmed: 41083534 DOI: doi:10.1038/s41467-025-64149-9 ]

EMD-62922
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Munc13-4-Rab27a complex with GppNHp
CryoEM
Release date: Oct. 1, 2025
Resolution: 4.38 Å
EM Method: Single-particle
Fitted PDBs: 9la9
Q-score: 0.329

Liu C, Liu D, Zheng X, Guan J, Zhou X, Zhang H, Wang S, Li Q, Lu G, He J, Ma C

Nat Commun (2025) 16 pp. 9080-9080 [ Pubmed: 41083534 DOI: doi:10.1038/s41467-025-64149-9 ]

EMD-39157
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CryoEM structure of M. tuberculosis ClpC1P1P2 complex bound to bortezomib, conformation 2
CryoEM
Release date: March 19, 2025
Resolution: 2.2 Å
EM Method: Single-particle
Fitted PDBs: 8ycx
Q-score: 0.526

Zhou B, Gao Y, Zhao H, Liu B, Zhang H, Fang C, Yuan H, Wang J, Li Z, Zhao Y, Huang X, Wang X, Oliveira ASF, Spencer J, Mulholland AJ, Burston SG, Hu J, Su N, Chen X, He J, Zhang T, Xiong X

Nat Commun (2025) 16 pp. 3466- [ DOI: doi:10.1038/s41467-025-58410-4 ]

Sort by: Download
Showing 1 - 10 of 23. Page 1 of 3
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [23]

Current status

  • REL [23]

Sample type

  • Complex [23]
  • Protein [22]
  • Ligand [16]
  • DNA [11]

Organism

  • Xenopus laevis [11]
  • Synthetic construct [8]
  • Mycobacterium tuberculosis [7]
  • Mycobacterium tuberculosis [7]
  • Homo sapiens [7]
  • Saccharomyces cerevisiae [6]
  • Bos mutus grunniens [3]
  • Saccharomyces cerevisiae [3]
  • (no species) [2]
  • (no species) [1]
  • Escherichia coli [1]
  • Drosophila melanogaster [1]

EM Method

  • Single-particle [23]

Resolution

  • ≥ 2Å and < 3Å [11]
  • ≥ 3Å and < 4Å [10]
  • ≥ 4Å and < 5Å [1]
  • ≥ 5Å and < 6Å [1]

Model molecular weight

  • 100-250 kDa [3]
  • 250-500 kDa [6]
  • 500-1000 kDa [13]

Release Date

  • 2026 [7]
  • 2025 [9]
  • 2023 [7]

Author by name

  • He J [23]
  • Wang C [14]
  • Li H [13]
  • Zhang Y [13]
  • Zou B [13]
  • Guan J [10]
  • Zhao H [10]
  • Chao WCH [9]
  • Dong S [9]
  • Zhang H [9]
  • Burston SG [7]
  • Chen X [7]
  • Fang C [7]
  • Gao X [7]
  • Gao Y [7]
  • Hu J [7]
  • Huang J [7]
  • Huang X [7]
  • Li M [7]
  • Li W [7]
  • Li Z [7]
  • Liu B [7]
  • Mulholland AJ [7]
  • Oliveira ASF [7]
  • Rasheed N [7]
  • Shi X [7]
  • Spencer J [7]
  • Su N [7]
  • Wang J [7]
  • Wang M [7]
  • Wang X [7]
  • Wong KH [7]
  • Xiong X [7]
  • Yuan H [7]
  • Zhang J [7]
  • Zhang T [7]
  • Zhang X [7]
  • Zhao Y [7]
  • Zhou B [7]
  • Zhou M [7]
  • Zhou N [7]
  • Pei D [6]
  • Qin D [6]
  • Sun F [5]
  • Chen J [4]
  • Luo Q [4]
  • Xu C [4]
  • Xu P [4]
  • Zhang N [3]
  • Zhou Y [3]
  • Chao W [2]
  • Chen W [2]
  • Guan JL [2]
  • Li Q [2]
  • Liu C [2]
  • Liu CQ [2]
  • Liu D [2]
  • Lu G [2]
  • Ma C [2]
  • Wang S [2]
  • Xie Y [2]
  • Yang X [2]
  • Yi L [2]
  • Zheng X [2]
  • Zhou X [2]
  • Chang X [1]
  • Jun H [1]
  • Meilin W [1]
  • Shuai W [1]
  • Zheng H [1]

Author by ORCID

  • He J [17]
  • Zhang X [7]
  • Chao WCH [7]
  • Rasheed N [7]
  • Chen J [4]
  • Zhang T [2]
  • Li Q [2]
  • Oliveira ASF [2]
  • Liu C [2]
  • Chen X [2]
  • Spencer J [2]
  • Xiong X [2]
  • Wang S [2]
  • Ma C [2]
  • Fang C [2]
  • Mulholland AJ [2]
  • Burston SG [2]
  • Gao Y [2]
  • Guan J [2]
  • Hu J [2]
  • Zheng X [2]
  • Liu D [2]

Journal

  • NAT COMMUN [9]
  • CELL RES [7]
  • NUCLEIC ACIDS RES [6]
  • ISCIENCE [1]

Software

  • CRYOSPARC [8]

Microscope

  • TFS KRIOS [15]
  • FEI TITAN KRIOS [6]
  • FEI TALOS ARCTICA [2]

Electron Source

  • FIELD EMISSION GUN [23]

Film or detector model

  • FEI FALCON IV 4K X 4K [21]
  • GATAN K3 6K X 4K [1]
  • GATAN K3 BIOQUANTUM 6K X 4K [1]

External links

  • PDB [23]
  • AlphaFold DB [22]
  • PDBe-Kb [22]
  • UniProt [22]
  • Pfam [21]
  • Gene Ontology [17]
  • ChEBI [16]
  • ChEMBL [16]
  • DrugBank [16]
  • InterPro [15]
  • Complex Portal [9]