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grant_code:"221524/Z/20/Z"

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Current Database

  • EMDB [23]

Current status

  • REL [23]

Sample type

  • Complex [21]
  • Protein [11]
  • Ligand [4]
  • Cell [1]
  • DNA [1]
  • Tissue [1]

Organism

  • Homo sapiens [19]
  • Felis catus [4]
  • Mus musculus [1]
  • Human herpesvirus 2 [1]
  • Alcaligenes xylosoxydans xylosoxydans [1]

EM Method

  • Single-particle [21]
  • Helical reconstruction [1]
  • Tomography [1]

Resolution

  • ≥ 2Å and < 3Å [1]
  • ≥ 3Å and < 4Å [15]
  • ≥ 4Å and < 5Å [4]
  • ≥ 16Å and < 20Å [1]
  • ≥ 20Å and < 30Å [1]

Model molecular weight

  • 100-250 kDa [2]
  • 250-500 kDa [3]
  • 500-1000 kDa [1]
  • 1-2 MDa [1]

Release Date

  • 2026 [1]
  • 2025 [14]
  • 2024 [2]
  • 2023 [6]

Author by name

  • Degtjarik O [15]
  • Muench SP [15]
  • Brannstrom K [14]
  • Chaparro-riggers J [14]
  • Horn MT [14]
  • Huang C-S [14]
  • Huang CS [14]
  • Huynh C [14]
  • Lin L [14]
  • Mosyak L [14]
  • Somers WS [14]
  • Wang H [14]
  • White JBR [14]
  • Campbell LJ [5]
  • Foglizzo M [5]
  • Musgrove LJ [5]
  • Zeqiraj E [5]
  • Burdett H [4]
  • Clifford G [4]
  • Heath GR [4]
  • Kumar D [4]
  • Wilson MD [4]
  • Ranson NA [3]
  • Calabrese AN [2]
  • Frank RAW [2]
  • Radford SE [2]
  • Wilkinson M [2]
  • Antonyuk SV [1]
  • Atanasiu D [1]
  • Burgess A [1]
  • Cahill A [1]
  • Cairns MT [1]
  • Cohen GH [1]
  • Datta A [1]
  • Deuchars S [1]
  • Dilley RL [1]
  • Dutta P [1]
  • Eady RR [1]
  • Fatima N [1]
  • Flynn A [1]
  • Flynn AJ [1]
  • Fontana J [1]
  • Friedman HM [1]
  • Geibel M [1]
  • Gilbert MAG [1]
  • Goodbody S [1]
  • Greenberg RA [1]
  • Guo Z [1]
  • Halfon Y [1]
  • Hasnain SS [1]
  • Hook LM [1]
  • Hoozemans JJM [1]
  • Jenkins J [1]
  • Krishnamoorthy V [1]
  • Leistner C [1]
  • Lovatt M [1]
  • Morrema THJ [1]
  • O Sullivan Tj [1]
  • Read RJ [1]
  • Rojas Rechy Mh [1]
  • Saw WT [1]
  • Schertel A [1]
  • Wilkinson MW [1]
  • Wu A [1]
  • Xu Y [1]

Author by ORCID

  • Huang CS [14]
  • Foglizzo M [4]
  • Wilson MD [3]
  • Ranson NA [3]
  • Wilkinson M [2]
  • Frank RAW [2]
  • Radford SE [2]
  • Muench SP [1]
  • Dilley RL [1]
  • Atanasiu D [1]
  • Read RJ [1]
  • Deuchars S [1]
  • Rojas Rechy Mh [1]
  • Antonyuk SV [1]
  • Hasnain SS [1]
  • Hoozemans JJM [1]
  • Hook LM [1]
  • Cairns MT [1]
  • Lovatt M [1]
  • Xu Y [1]
  • Cohen GH [1]
  • Jenkins J [1]
  • Fontana J [1]
  • Burgess A [1]
  • Dutta P [1]
  • Calabrese AN [1]
  • Cahill A [1]
  • Gilbert MAG [1]

Journal

  • PLOS BIOL [14]
  • NUCLEIC ACIDS RES [4]
  • NAT COMMUN [2]
  • CELL [1]
  • NATURE [1]
  • TO BE PUBLISHED [1]

Software

  • CRYOSPARC [20]
  • RELION [5]
  • CRYOLO [1]
  • IMOD [1]

Microscope

  • TFS KRIOS [15]
  • FEI TITAN KRIOS [8]

Electron Source

  • FIELD EMISSION GUN [23]

Film or detector model

  • FEI FALCON IV 4K X 4K [19]
  • FEI FALCON III 4K X 4K [2]
  • GATAN K2 SUMMIT 4K X 4K [1]
  • TFS FALCON 4I 4K X 4K [1]

External links

  • PDB [23]
  • UniProt [11]
  • AlphaFold DB [10]
  • PDBe-Kb [10]
  • Complex Portal [7]
  • EMPIAR [6]
  • Pfam [6]
  • Gene Ontology [5]
  • InterPro [5]
  • ChEBI [4]
  • ChEMBL [4]
  • DrugBank [4]
Sort by: Download
Showing 1 - 10 of 23. Page 1 of 3
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EMD-57830
Download Map
3D View
Herpes simplex virus 2 delta28-73 glycoprotein C ectodomain in complex with C3b
CryoEM
Release date: May 6, 2026
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 30je
Q-score: 0.456

Rojas Rechy MH, Atanasiu D, Hook LM, Cairns MT, Saw WT, Cahill A, Guo Z, Calabrese AN, Ranson NA, Friedman HM, Cohen GH, Fontana J

To Be Published

EMD-49208
Download Map
3D View
Consensus map of the autoinhibitory unliganded CD163 trimer map A
CryoEM
Consensus map
Release date: June 18, 2025
Resolution: 3.0 Å
EM Method: Single-particle

Huang CS, Wang H, White JBR, Degtjarik O, Huynh C, Brannstrom K, Horn MT, Muench SP, Somers WS, Chaparro-Riggers J, Lin L, Mosyak L

PLoS Biol (2025) 23 pp. e3003264-e3003264 [ Pubmed: 40644526 DOI: doi:10.1371/journal.pbio.3003264 ]

EMD-49209
Download Map
3D View
Local map of the autoinhibitory unliganded CD163 trimer map B
Focused map
CryoEM
Release date: June 18, 2025
Resolution: 3.1 Å
EM Method: Single-particle

Huang CS, Wang H, White JBR, Degtjarik O, Huynh C, Brannstrom K, Horn MT, Muench SP, Somers WS, Chaparro-Riggers J, Lin L, Mosyak L

PLoS Biol (2025) 23 pp. e3003264-e3003264 [ Pubmed: 40644526 DOI: doi:10.1371/journal.pbio.3003264 ]

EMD-49210
Download Map
3D View
Local map of the autoinhibitory unliganded CD163 trimer map C
CryoEM
Focused map
Release date: June 18, 2025
Resolution: 3.5 Å
EM Method: Single-particle

Huang CS, Wang H, White JBR, Degtjarik O, Huynh C, Brannstrom K, Horn MT, Muench SP, Somers WS, Chaparro-Riggers J, Lin L, Mosyak L

PLoS Biol (2025) 23 pp. e3003264-e3003264 [ Pubmed: 40644526 DOI: doi:10.1371/journal.pbio.3003264 ]

EMD-49211
Download Map
3D View
Local map of the autoinhibitory unliganded CD163 trimer map D
CryoEM
Focused map
Release date: June 18, 2025
Resolution: 3.3 Å
EM Method: Single-particle

Huang CS, Wang H, White JBR, Degtjarik O, Huynh C, Brannstrom K, Horn MT, Muench SP, Somers WS, Chaparro-Riggers J, Lin L, Mosyak L

PLoS Biol (2025) 23 pp. e3003264-e3003264 [ Pubmed: 40644526 DOI: doi:10.1371/journal.pbio.3003264 ]

EMD-49212
Download Map
3D View
Local map of the autoinhibitory unliganded CD163 trimer map E
CryoEM
Focused map
Release date: June 18, 2025
Resolution: 3.1 Å
EM Method: Single-particle

Huang CS, Wang H, White JBR, Degtjarik O, Huynh C, Brannstrom K, Horn MT, Muench SP, Somers WS, Chaparro-Riggers J, Lin L, Mosyak L

PLoS Biol (2025) 23 pp. e3003264-e3003264 [ Pubmed: 40644526 DOI: doi:10.1371/journal.pbio.3003264 ]

EMD-49213
Download Map
3D View
Composite map of the autoinhibitory unliganded CD163 trimer map F
Composite map
CryoEM
Release date: June 18, 2025
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 9nb5
Q-score: 0.533

Huang CS, Wang H, White JBR, Degtjarik O, Huynh C, Brannstrom K, Horn MT, Muench SP, Somers WS, Chaparro-Riggers J, Lin L, Mosyak L

PLoS Biol (2025) 23 pp. e3003264-e3003264 [ Pubmed: 40644526 DOI: doi:10.1371/journal.pbio.3003264 ]

EMD-49214
Download Map
3D View
Consensus map of the CD163/Hp 1-1 Hb complex Map G
CryoEM
Consensus map
Release date: June 18, 2025
Resolution: 3.3 Å
EM Method: Single-particle

Huang CS, Wang H, White JBR, Degtjarik O, Huynh C, Brannstrom K, Horn MT, Muench SP, Somers WS, Chaparro-Riggers J, Lin L, Mosyak L

PLoS Biol (2025) 23 pp. e3003264-e3003264 [ Pubmed: 40644526 DOI: doi:10.1371/journal.pbio.3003264 ]

EMD-49215
Download Map
3D View
Local map of the CD163/Hp 1-1 Hb complex Map H
CryoEM
Focused map
Release date: June 18, 2025
Resolution: 3.3 Å
EM Method: Single-particle

Huang CS, Wang H, White JBR, Degtjarik O, Huynh C, Brannstrom K, Horn MT, Muench SP, Somers WS, Chaparro-Riggers J, Lin L, Mosyak L

PLoS Biol (2025) 23 pp. e3003264-e3003264 [ Pubmed: 40644526 DOI: doi:10.1371/journal.pbio.3003264 ]

EMD-49216
Download Map
3D View
Local map of the CD163/Hp 1-1 Hb complex Map I
CryoEM
Focused map
Release date: June 18, 2025
Resolution: 3.4 Å
EM Method: Single-particle

Huang CS, Wang H, White JBR, Degtjarik O, Huynh C, Brannstrom K, Horn MT, Muench SP, Somers WS, Chaparro-Riggers J, Lin L, Mosyak L

PLoS Biol (2025) 23 pp. e3003264-e3003264 [ Pubmed: 40644526 DOI: doi:10.1371/journal.pbio.3003264 ]

Sort by: Download
Showing 1 - 10 of 23. Page 1 of 3
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [23]

Current status

  • REL [23]

Sample type

  • Complex [21]
  • Protein [11]
  • Ligand [4]
  • Cell [1]
  • DNA [1]
  • Tissue [1]

Organism

  • Homo sapiens [19]
  • Felis catus [4]
  • Mus musculus [1]
  • Human herpesvirus 2 [1]
  • Alcaligenes xylosoxydans xylosoxydans [1]

EM Method

  • Single-particle [21]
  • Helical reconstruction [1]
  • Tomography [1]

Resolution

  • ≥ 2Å and < 3Å [1]
  • ≥ 3Å and < 4Å [15]
  • ≥ 4Å and < 5Å [4]
  • ≥ 16Å and < 20Å [1]
  • ≥ 20Å and < 30Å [1]

Model molecular weight

  • 100-250 kDa [2]
  • 250-500 kDa [3]
  • 500-1000 kDa [1]
  • 1-2 MDa [1]

Release Date

  • 2026 [1]
  • 2025 [14]
  • 2024 [2]
  • 2023 [6]

Author by name

  • Degtjarik O [15]
  • Muench SP [15]
  • Brannstrom K [14]
  • Chaparro-riggers J [14]
  • Horn MT [14]
  • Huang C-S [14]
  • Huang CS [14]
  • Huynh C [14]
  • Lin L [14]
  • Mosyak L [14]
  • Somers WS [14]
  • Wang H [14]
  • White JBR [14]
  • Campbell LJ [5]
  • Foglizzo M [5]
  • Musgrove LJ [5]
  • Zeqiraj E [5]
  • Burdett H [4]
  • Clifford G [4]
  • Heath GR [4]
  • Kumar D [4]
  • Wilson MD [4]
  • Ranson NA [3]
  • Calabrese AN [2]
  • Frank RAW [2]
  • Radford SE [2]
  • Wilkinson M [2]
  • Antonyuk SV [1]
  • Atanasiu D [1]
  • Burgess A [1]
  • Cahill A [1]
  • Cairns MT [1]
  • Cohen GH [1]
  • Datta A [1]
  • Deuchars S [1]
  • Dilley RL [1]
  • Dutta P [1]
  • Eady RR [1]
  • Fatima N [1]
  • Flynn A [1]
  • Flynn AJ [1]
  • Fontana J [1]
  • Friedman HM [1]
  • Geibel M [1]
  • Gilbert MAG [1]
  • Goodbody S [1]
  • Greenberg RA [1]
  • Guo Z [1]
  • Halfon Y [1]
  • Hasnain SS [1]
  • Hook LM [1]
  • Hoozemans JJM [1]
  • Jenkins J [1]
  • Krishnamoorthy V [1]
  • Leistner C [1]
  • Lovatt M [1]
  • Morrema THJ [1]
  • O Sullivan Tj [1]
  • Read RJ [1]
  • Rojas Rechy Mh [1]
  • Saw WT [1]
  • Schertel A [1]
  • Wilkinson MW [1]
  • Wu A [1]
  • Xu Y [1]

Author by ORCID

  • Huang CS [14]
  • Foglizzo M [4]
  • Wilson MD [3]
  • Ranson NA [3]
  • Wilkinson M [2]
  • Frank RAW [2]
  • Radford SE [2]
  • Muench SP [1]
  • Dilley RL [1]
  • Atanasiu D [1]
  • Read RJ [1]
  • Deuchars S [1]
  • Rojas Rechy Mh [1]
  • Antonyuk SV [1]
  • Hasnain SS [1]
  • Hoozemans JJM [1]
  • Hook LM [1]
  • Cairns MT [1]
  • Lovatt M [1]
  • Xu Y [1]
  • Cohen GH [1]
  • Jenkins J [1]
  • Fontana J [1]
  • Burgess A [1]
  • Dutta P [1]
  • Calabrese AN [1]
  • Cahill A [1]
  • Gilbert MAG [1]

Journal

  • PLOS BIOL [14]
  • NUCLEIC ACIDS RES [4]
  • NAT COMMUN [2]
  • CELL [1]
  • NATURE [1]
  • TO BE PUBLISHED [1]

Software

  • CRYOSPARC [20]
  • RELION [5]
  • CRYOLO [1]
  • IMOD [1]

Microscope

  • TFS KRIOS [15]
  • FEI TITAN KRIOS [8]

Electron Source

  • FIELD EMISSION GUN [23]

Film or detector model

  • FEI FALCON IV 4K X 4K [19]
  • FEI FALCON III 4K X 4K [2]
  • GATAN K2 SUMMIT 4K X 4K [1]
  • TFS FALCON 4I 4K X 4K [1]

External links

  • PDB [23]
  • UniProt [11]
  • AlphaFold DB [10]
  • PDBe-Kb [10]
  • Complex Portal [7]
  • EMPIAR [6]
  • Pfam [6]
  • Gene Ontology [5]
  • InterPro [5]
  • ChEBI [4]
  • ChEMBL [4]
  • DrugBank [4]