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grant_code:"FOR-1805"

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Current Database

  • EMDB [8]

Current status

  • REL [8]

Sample type

  • Complex [8]
  • Protein [8]
  • RNA [8]
  • Ligand [6]

Organism

  • Escherichia coli [7]
  • Apis mellifera [4]
  • Bacillus subtilis [1]
  • Spinacia oleracea [1]
  • Escherichia coli [1]
  • Escherichia coli [1]

EM Method

  • Single-particle [8]

Resolution

  • ≥ 3Å and < 4Å [7]
  • ≥ 4Å and < 5Å [1]

Model molecular weight

  • 1-2 MDa [1]
  • 2-5 MDa [7]

Release Date

  • 2018 [6]
  • 2016 [2]

Author by name

  • Wilson DN [8]
  • Graf M [7]
  • Huter P [7]
  • Maracci C [5]
  • Peterek M [5]
  • Rodnina MV [5]
  • Abdelshahid M [2]
  • Arenz S [2]
  • Hauryliuk V [2]
  • Novacek J [2]
  • Atkinson GC [1]
  • Beckmann R [1]
  • Berninghausen O [1]
  • Crowe-mcauliffe C [1]
  • Donhofer A [1]
  • Murina V [1]
  • Payoe R [1]
  • Sohmen D [1]
  • Starosta AL [1]
  • Takada H [1]

Author by ORCID

  • Wilson DN [8]
  • Graf M [6]
  • Rodnina MV [5]
  • Maracci C [5]
  • Hauryliuk V [2]
  • Novacek J [2]
  • Atkinson GC [1]
  • Murina V [1]
  • Takada H [1]
  • Crowe-mcauliffe C [1]
  • Starosta AL [1]

Journal

  • NAT COMMUN [5]
  • NUCLEIC ACIDS RES [2]
  • PNAS [1]

Software

  • FREALIGN [1]
  • GCTF [1]
  • RELION [1]
  • SPIDER [1]

Microscope

  • FEI TITAN KRIOS [8]

Electron Source

  • FIELD EMISSION GUN [8]

Film or detector model

  • FEI FALCON II 4K X 4K [7]
  • FEI FALCON III 4K X 4K [1]

External links

  • AlphaFold DB [8]
  • Gene Ontology [8]
  • InterPro [8]
  • PDB [8]
  • PDBe-Kb [8]
  • Pfam [8]
  • UniProt [8]
  • ChEBI [6]
  • Complex Portal [6]
  • DrugBank [6]
  • SCOP2 [3]
  • CATH [1]
  • ChEMBL [1]
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EMD-0177
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Cryo-EM structure of the ABCF protein VmlR bound to the Bacillus subtilis ribosome
Release date: Aug. 29, 2018
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 6ha8
Q-score: 0.389

Crowe-McAuliffe C, Graf M, Huter P, Takada H, Abdelshahid M, Novacek J, Murina V, Atkinson GC, Hauryliuk V, Wilson DN

PNAS (2018) 115 pp. 8978-8983 [ Pubmed: 30126986 DOI: doi:10.1073/pnas.1808535115 ]

EMD-0080
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Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1 GAQ and Pint-tRNA State II
Release date: Aug. 22, 2018
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 6gxm
Q-score: 0.319

Graf M, Huter P, Maracci C, Peterek M, Rodnina MV, Wilson DN

Nat Commun (2018) 9 pp. 3053-3053 [ DOI: doi:10.1038/s41467-018-05465-1 Pubmed: 30076302 ]

EMD-0076
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Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1 GAQ and Pint-tRNA State I
Release date: Aug. 15, 2018
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 6gwt
Q-score: 0.33

Graf M, Huter P, Maracci C, Peterek M, Rodnina MV, Wilson DN

Nat Commun (2018) 9 pp. 3053-3053 [ DOI: doi:10.1038/s41467-018-05465-1 Pubmed: 30076302 ]

EMD-0081
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Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1 GAQ and Pint-tRNA State III
Release date: Aug. 15, 2018
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 6gxn
Q-score: 0.307

Graf M, Huter P, Maracci C, Peterek M, Rodnina MV, Wilson DN

Nat Commun (2018) 9 pp. 3053-3053 [ DOI: doi:10.1038/s41467-018-05465-1 Pubmed: 30076302 ]

EMD-0082
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Cryo-EM structure of a rotated E. coli 70S ribosome in complex with RF3-GDPCP, RF1 GAQ and P/E-tRNA State IV
Release date: Aug. 15, 2018
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 6gxo
Q-score: 0.308

Graf M, Huter P, Maracci C, Peterek M, Rodnina MV, Wilson DN

Nat Commun (2018) 9 pp. 3053-3053 [ DOI: doi:10.1038/s41467-018-05465-1 Pubmed: 30076302 ]

EMD-0083
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Cryo-EM structure of a rotated E. coli 70S ribosome in complex with RF3-GDPCP RF3-only
Release date: Aug. 15, 2018
Resolution: 4.4 Å
EM Method: Single-particle
Fitted PDBs: 6gxp
Q-score: 0.217

Graf M, Huter P, Maracci C, Peterek M, Rodnina MV, Wilson DN

Nat Commun (2018) 9 pp. 3053-3053 [ DOI: doi:10.1038/s41467-018-05465-1 Pubmed: 30076302 ]

EMD-3525
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Cryo-EM structure of the spinach chloroplast ribosome reveals the location of plastid-specific ribosomal proteins and extensions
Release date: Dec. 28, 2016
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 5mlc
Q-score: 0.39

Graf M, Arenz S, Huter P, Donhofer A, Novacek J, Wilson DN

Nucleic Acids Res (2017) 45 pp. 2887-2896 [ DOI: doi:10.1093/nar/gkw1272 Pubmed: 27986857 ]

EMD-4001
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Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complex
Release date: July 20, 2016
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 5l3p
Q-score: -0.001

Arenz S, Abdelshahid M, Sohmen D, Payoe R, Starosta AL, Berninghausen O, Hauryliuk V, Beckmann R, Wilson DN

Nucleic Acids Res (2016) 44 pp. 6471-6481 [ Pubmed: 27226493 DOI: doi:10.1093/nar/gkw470 ]

Sort by: Download
Showing 1 - 8 of 8. Page 1 of 1
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [8]

Current status

  • REL [8]

Sample type

  • Complex [8]
  • Protein [8]
  • RNA [8]
  • Ligand [6]

Organism

  • Escherichia coli [7]
  • Apis mellifera [4]
  • Bacillus subtilis [1]
  • Spinacia oleracea [1]
  • Escherichia coli [1]
  • Escherichia coli [1]

EM Method

  • Single-particle [8]

Resolution

  • ≥ 3Å and < 4Å [7]
  • ≥ 4Å and < 5Å [1]

Model molecular weight

  • 1-2 MDa [1]
  • 2-5 MDa [7]

Release Date

  • 2018 [6]
  • 2016 [2]

Author by name

  • Wilson DN [8]
  • Graf M [7]
  • Huter P [7]
  • Maracci C [5]
  • Peterek M [5]
  • Rodnina MV [5]
  • Abdelshahid M [2]
  • Arenz S [2]
  • Hauryliuk V [2]
  • Novacek J [2]
  • Atkinson GC [1]
  • Beckmann R [1]
  • Berninghausen O [1]
  • Crowe-mcauliffe C [1]
  • Donhofer A [1]
  • Murina V [1]
  • Payoe R [1]
  • Sohmen D [1]
  • Starosta AL [1]
  • Takada H [1]

Author by ORCID

  • Wilson DN [8]
  • Graf M [6]
  • Rodnina MV [5]
  • Maracci C [5]
  • Hauryliuk V [2]
  • Novacek J [2]
  • Atkinson GC [1]
  • Murina V [1]
  • Takada H [1]
  • Crowe-mcauliffe C [1]
  • Starosta AL [1]

Journal

  • NAT COMMUN [5]
  • NUCLEIC ACIDS RES [2]
  • PNAS [1]

Software

  • FREALIGN [1]
  • GCTF [1]
  • RELION [1]
  • SPIDER [1]

Microscope

  • FEI TITAN KRIOS [8]

Electron Source

  • FIELD EMISSION GUN [8]

Film or detector model

  • FEI FALCON II 4K X 4K [7]
  • FEI FALCON III 4K X 4K [1]

External links

  • AlphaFold DB [8]
  • Gene Ontology [8]
  • InterPro [8]
  • PDB [8]
  • PDBe-Kb [8]
  • Pfam [8]
  • UniProt [8]
  • ChEBI [6]
  • Complex Portal [6]
  • DrugBank [6]
  • SCOP2 [3]
  • CATH [1]
  • ChEMBL [1]