Electron Microscopy Data Bank

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author:"Zhang W"

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Current Database

Current status

Sample type

Organism

Homo sapiens [235]
Severe acute respiratory syndrome coronavirus [46]
Mus musculus [35]
Synthetic construct [18]
Escherichia coli [11]
Xenopus laevis [11]
Sus scrofa [11]
Arabidopsis thaliana [10]
Bacillus subtilis [9]
Pectobacterium atrosepticum [7]
Chlamydomonas reinhardtii [7]
Saccharomyces cerevisiae [7]
Dengue virus [6]
Pseudomonas aeruginosa [6]
Salasvirus phi29 [6]
Epstein-barr virus (strain gd1) [5]
Influenza a virus [5]
Synechococcus elongatus [5]
Hepatitis b virus [5]
Saccharomyces cerevisiae [5]
Zika virus [5]
Lama glama [5]
Primate erythroparvovirus 1 [4]
Orthoflavivirus denguei [4]
Drosophila melanogaster [4]
Oryctolagus cuniculus [4]
Monkeypox virus [3]
Primate t-lymphotropic virus 1 [3]
Wuhan asiatic toad influenza virus [3]
Rhodomonas sp. nies-2332 [3]
Vicugna pacos [3]
Enterovirus b [3]
Thiocystis violascens [3]
Thiocystis violascens [3]
Petromyzon marinus [3]
Bos taurus [3]
(no species) [2]
African swine fever virus [2]
Sindbis virus [2]
West nile virus [2]
Yellow fever virus [2]
Human immunodeficiency virus 2 [2]
Staphylococcus aureus [2]
Wuhan spiny eel influenza virus [2]
Novosphingopyxis baekryungensis [2]
Prochlorococcus phage p-scsp1u [2]
Severe acute respiratory syndrome coronavirus [2]
Aspergillus terreus [2]
Human herpesvirus 8 [2]
Oryza sativa [2]
Alphainfluenzavirus influenzae [2]
Claviceps fusiformis [2]
Acinetobacter baumannii [2]
Caenorhabditis elegans [2]
(no species) [2]
Mesocricetus auratus [1]
Mus abbotti [1]
Rattus norvegicus [1]
Bacillus phage phi29 [1]
(no species) [1]
Dengue virus [1]
Japanese encephalitis virus [1]
Avian coronavirus [1]
Human coronavirus 229e [1]
Indiana vesiculovirus [1]
Unidentified influenza virus [1]
Human immunodeficiency virus 2 [1]
Dengue virus [1]
Pandoravirus salinus [1]
Coronavirus hku15 [1]
Influenza a virus [1]
Escherichia phage ecszw-2 [1]
Thermus thermophilus [1]
Severe acute respiratory syndrome coronavirus [1]
Bacteriophage sp. [1]
Enterovirus a [1]
Mycobacterium tuberculosis [1]
Rhizophagus irregularis [1]
Bat coronavirus hku5 [1]
Apis mellifera [1]
884424 [1]

EM Method

Resolution

Release Date

Author by name

Zhang W [461]
Shi Y [82]
Zhang Y [80]
Wang X [71]
Wang L [64]
Chen J [55]
Li X [52]
Zhang X [52]
Hu Y [49]
Liu Y [45]
Wang J [44]
Zhang J [43]
Chen Y [42]
Murzin AG [42]
Wang Y [42]
Goedert M [41]
Scheres SHW [41]
Wang P [41]
Li L [39]
Ghetti B [37]
Garringer HJ [34]
Vidal R [34]
Wang W [33]
Zhou Q [33]
Sun Y [31]
Yang Y [31]
Yu X [31]
Falcon B [30]
Chai Y [29]
Li D [28]
Sun L [28]
Zhao X [28]
Yang Z [27]
Li S [26]
Liu Z [26]
Zhang Z [26]
Guo J [25]
Li C [25]
Liu H [25]
Gao GF [24]
Huang B [24]
Luo C [24]
Xie Y [24]
Zhao J [24]
Zhao W [24]
Hasegawa M [23]
Kotecha A [23]
Kovacs GG [23]
Murayama S [23]
Tarutani A [23]
Gao W [22]
Huang Y [22]
Liang E [22]
Su Q [22]
Wang K [22]
Xin W [22]
Yu J [22]
Chen X [21]
Mao Q [21]
Sun J [21]
Wang Q [21]
Xu Z [21]
Yang S [21]
Yu L [21]
Hallinan GI [20]
Huang Z [20]
Lashley T [20]
Li J [20]
Liu K [20]
Qi J [20]
Revesz T [20]
Saito Y [20]
Yoshida M [20]
Zhao C [20]
Zhu H [20]
Zhu K [20]
Zhu Y [20]
Hu H [19]
Jiao H [19]
Pan Q [19]
Qiao R [19]
Xie YF [19]
Zhang D [19]
Chen Q [18]
Sun JP [18]
Cai C [17]
Chen LN [17]
Hu R [17]
Ikeuchi T [17]
Ji S [17]
Ji SY [17]
Liang P [17]
Liu L [17]
Miao L [17]
Qin J [17]
Shen DD [17]
Song W [17]
Wang N [17]
Wang R [17]
Wang WW [17]

Journal

NAT COMMUN [78]
NATURE [66]
CELL DISCOV [41]
CELL RES [41]
BIORXIV [39]
CELL [28]
SCIENCE [26]
MOL CELL [19]
SCI ADV [18]
CELL REP [13]
ELIFE [13]
PNAS [12]
TO BE PUBLISHED [12]
COMMUN BIOL [11]
NUCLEIC ACIDS RES [8]
STRUCTURE [8]
J VIROL [7]
ACTA NEUROPATHOL [6]
PLOS PATHOG [6]
HLIFE [5]
MOL PLANT [5]
NAT STRUCT MOL BIOL [5]
CELL REP MED [4]
NAT PLANTS [4]
FRONT PLANT SCI [3]
J MOL BIOL [3]
DEV CELL [2]
PLOS BIOL [2]
VIRUSES [2]
BIOCHEMISTRY [1]
EMBO J [1]
EMBO REP [1]
EMERG MICROBES INFECT [1]
J BIOL CHEM [1]
J STRUCT BIOL [1]
MOL.CANCER THER. [1]
NAT CHEM BIOL [1]
SOIL BIOL.BIOCHEM. [1]
SOIL BIOLOGY AND BIOCHEMISTRY [1]

Software

Microscope

Electron Source

Film or detector model

EMPIAR Experiment type

EMPIAR Image category

External links

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Showing 1 - 10 of 469. Page 1 of 47

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EMD-66628

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Structure of the HCoV-229E spike glycoprotein determined by subtomogram averaging

CryoEM

Release date: Sept. 16, 2026
Resolution: 3.9 Å
EM Method: Subtomogram averaging
Fitted PDBs: 9x6z

Q-score: 0.371
Similar entry percentile: 43%

Zhang Z, Peng C, Zhang W, Liang J, Liu K, Chen Y, Zhang J, Liang R, Song Y, Li S

Nat Commun (2026) 17 [ Pubmed: 42649199 DOI: doi:10.1038/s41467-026-75998-3 ]

EMD-66645

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Structure of the vesicular stomatitis virus nucleocapsid subbox

CryoEM

Release date: Sept. 16, 2026
Resolution: 4.6 Å
EM Method: Subtomogram averaging

Zhang Z, Peng C, Zhang W, Liang J, Liu K, Chen Y, Zhang J, Liang R, Song Y, Li S

Nat Commun (2026) 17 [ Pubmed: 42649199 DOI: doi:10.1038/s41467-026-75998-3 ]

EMD-66624

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Structure of hemagglutinin from influenza A virions determined by sub-tomogram averaging

CryoEM

Release date: Aug. 26, 2026
Resolution: 3.6 Å
EM Method: Subtomogram averaging
Fitted PDBs: 9x6s

Zhang Z, Peng C, Zhang W, Liang J, Liu K, Chen Y, Zhang J, Liang R, Song Y, Li S

Nat Commun (2026) 17 [ Pubmed: 42649199 DOI: doi:10.1038/s41467-026-75998-3 ]

EMD-58456

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Electron tomogram of the postmitotic nuclear envelope following acute Nup62 depletion

Negative staining

CryoEM

Release date: June 24, 2026
EM Method: Tomography

Zhang W, Latham AP, Ronchi P, Schnorrenberg S, Heriche JK, Huang Z, Sue C, Hossain MJ, Morero NR, Pflaumer H, Hantsche-Grininger M, Schwab Y, Sali A, Ellenberg J

Nat Struct Mol Biol (2026) 33 pp. 1354-1366 [ Pubmed: 42613378 DOI: doi:10.1038/s41594-026-01865-w ]

EMD-62496

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Cryo-EM structure of human VAChT at protonated state

CryoEM

Release date: June 3, 2026
Resolution: 3.21 Å
EM Method: Single-particle
Fitted PDBs: 9kq5

Q-score: 0.471
Similar entry percentile: 51%

Zhang W, Wei F, Zhang Y

To Be Published

EMD-62507

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Cryo-EM structure of human VAChT in complex with VSM

CryoEM

Release date: June 3, 2026
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 9kqm

Q-score: 0.465
Similar entry percentile: 63%

Zhang W, Wei F, Zhang Y

To Be Published

EMD-62393

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Cryo-EM structure of human VAChT in complex with ACh

CryoEM

Release date: May 27, 2026
Resolution: 2.72 Å
EM Method: Single-particle
Fitted PDBs: 9kkn

Q-score: 0.554
Similar entry percentile: 68%

Zhang W, Wei F, Zhang Y

To Be Published

EMD-62394

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Cryo-EM structure of human VAChT in apo state

CryoEM

Release date: May 27, 2026
Resolution: 3.25 Å
EM Method: Single-particle
Fitted PDBs: 9kko

Q-score: 0.5
Similar entry percentile: 66%

Zhang W, Wei F, Zhang Y

To Be Published

EMD-66544

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Structure Of the KEOPS dimer

CryoEM

Release date: May 27, 2026
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 9x4g

Q-score: 0.316
Similar entry percentile: 5%

Zhou L, Zhang Z, Jin M, Xie D, Wen H, Westhof E, Lei D, Zhang W

Nat Commun (2026) 17 [ DOI: doi:10.1038/s41467-026-73296-6 Pubmed: 42140986 ]

EMD-66545

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Structure Of the KEOPS-tRNA

CryoEM

Release date: May 27, 2026
Resolution: 3.36 Å
EM Method: Single-particle
Fitted PDBs: 9x4h

Q-score: 0.293
Similar entry percentile: 6%

Zhou L, Zhang Z, Jin M, Xie D, Wen H, Westhof E, Lei D, Zhang W

Nat Commun (2026) 17 [ DOI: doi:10.1038/s41467-026-73296-6 Pubmed: 42140986 ]

Sort by: Download

Showing 1 - 10 of 469. Page 1 of 47

Display:

Statistics

Filter By

Current Database

Current status

Sample type

Organism

Homo sapiens [235]
Severe acute respiratory syndrome coronavirus [46]
Mus musculus [35]
Synthetic construct [18]
Escherichia coli [11]
Xenopus laevis [11]
Sus scrofa [11]
Arabidopsis thaliana [10]
Bacillus subtilis [9]
Pectobacterium atrosepticum [7]
Chlamydomonas reinhardtii [7]
Saccharomyces cerevisiae [7]
Dengue virus [6]
Pseudomonas aeruginosa [6]
Salasvirus phi29 [6]
Epstein-barr virus (strain gd1) [5]
Influenza a virus [5]
Synechococcus elongatus [5]
Hepatitis b virus [5]
Saccharomyces cerevisiae [5]
Zika virus [5]
Lama glama [5]
Primate erythroparvovirus 1 [4]
Orthoflavivirus denguei [4]
Drosophila melanogaster [4]
Oryctolagus cuniculus [4]
Monkeypox virus [3]
Primate t-lymphotropic virus 1 [3]
Wuhan asiatic toad influenza virus [3]
Rhodomonas sp. nies-2332 [3]
Vicugna pacos [3]
Enterovirus b [3]
Thiocystis violascens [3]
Thiocystis violascens [3]
Petromyzon marinus [3]
Bos taurus [3]
(no species) [2]
African swine fever virus [2]
Sindbis virus [2]
West nile virus [2]
Yellow fever virus [2]
Human immunodeficiency virus 2 [2]
Staphylococcus aureus [2]
Wuhan spiny eel influenza virus [2]
Novosphingopyxis baekryungensis [2]
Prochlorococcus phage p-scsp1u [2]
Severe acute respiratory syndrome coronavirus [2]
Aspergillus terreus [2]
Human herpesvirus 8 [2]
Oryza sativa [2]
Alphainfluenzavirus influenzae [2]
Claviceps fusiformis [2]
Acinetobacter baumannii [2]
Caenorhabditis elegans [2]
(no species) [2]
Mesocricetus auratus [1]
Mus abbotti [1]
Rattus norvegicus [1]
Bacillus phage phi29 [1]
(no species) [1]
Dengue virus [1]
Japanese encephalitis virus [1]
Avian coronavirus [1]
Human coronavirus 229e [1]
Indiana vesiculovirus [1]
Unidentified influenza virus [1]
Human immunodeficiency virus 2 [1]
Dengue virus [1]
Pandoravirus salinus [1]
Coronavirus hku15 [1]
Influenza a virus [1]
Escherichia phage ecszw-2 [1]
Thermus thermophilus [1]
Severe acute respiratory syndrome coronavirus [1]
Bacteriophage sp. [1]
Enterovirus a [1]
Mycobacterium tuberculosis [1]
Rhizophagus irregularis [1]
Bat coronavirus hku5 [1]
Apis mellifera [1]
884424 [1]

EM Method

Resolution

Release Date

Author by name

Zhang W [461]
Shi Y [82]
Zhang Y [80]
Wang X [71]
Wang L [64]
Chen J [55]
Li X [52]
Zhang X [52]
Hu Y [49]
Liu Y [45]
Wang J [44]
Zhang J [43]
Chen Y [42]
Murzin AG [42]
Wang Y [42]
Goedert M [41]
Scheres SHW [41]
Wang P [41]
Li L [39]
Ghetti B [37]
Garringer HJ [34]
Vidal R [34]
Wang W [33]
Zhou Q [33]
Sun Y [31]
Yang Y [31]
Yu X [31]
Falcon B [30]
Chai Y [29]
Li D [28]
Sun L [28]
Zhao X [28]
Yang Z [27]
Li S [26]
Liu Z [26]
Zhang Z [26]
Guo J [25]
Li C [25]
Liu H [25]
Gao GF [24]
Huang B [24]
Luo C [24]
Xie Y [24]
Zhao J [24]
Zhao W [24]
Hasegawa M [23]
Kotecha A [23]
Kovacs GG [23]
Murayama S [23]
Tarutani A [23]
Gao W [22]
Huang Y [22]
Liang E [22]
Su Q [22]
Wang K [22]
Xin W [22]
Yu J [22]
Chen X [21]
Mao Q [21]
Sun J [21]
Wang Q [21]
Xu Z [21]
Yang S [21]
Yu L [21]
Hallinan GI [20]
Huang Z [20]
Lashley T [20]
Li J [20]
Liu K [20]
Qi J [20]
Revesz T [20]
Saito Y [20]
Yoshida M [20]
Zhao C [20]
Zhu H [20]
Zhu K [20]
Zhu Y [20]
Hu H [19]
Jiao H [19]
Pan Q [19]
Qiao R [19]
Xie YF [19]
Zhang D [19]
Chen Q [18]
Sun JP [18]
Cai C [17]
Chen LN [17]
Hu R [17]
Ikeuchi T [17]
Ji S [17]
Ji SY [17]
Liang P [17]
Liu L [17]
Miao L [17]
Qin J [17]
Shen DD [17]
Song W [17]
Wang N [17]
Wang R [17]
Wang WW [17]

Journal

NAT COMMUN [78]
NATURE [66]
CELL DISCOV [41]
CELL RES [41]
BIORXIV [39]
CELL [28]
SCIENCE [26]
MOL CELL [19]
SCI ADV [18]
CELL REP [13]
ELIFE [13]
PNAS [12]
TO BE PUBLISHED [12]
COMMUN BIOL [11]
NUCLEIC ACIDS RES [8]
STRUCTURE [8]
J VIROL [7]
ACTA NEUROPATHOL [6]
PLOS PATHOG [6]
HLIFE [5]
MOL PLANT [5]
NAT STRUCT MOL BIOL [5]
CELL REP MED [4]
NAT PLANTS [4]
FRONT PLANT SCI [3]
J MOL BIOL [3]
DEV CELL [2]
PLOS BIOL [2]
VIRUSES [2]
BIOCHEMISTRY [1]
EMBO J [1]
EMBO REP [1]
EMERG MICROBES INFECT [1]
J BIOL CHEM [1]
J STRUCT BIOL [1]
MOL.CANCER THER. [1]
NAT CHEM BIOL [1]
SOIL BIOL.BIOCHEM. [1]
SOIL BIOLOGY AND BIOCHEMISTRY [1]

Software

Microscope

Electron Source

Film or detector model

EMPIAR Experiment type

EMPIAR Image category

External links