Electron Microscopy Data Bank

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author:"Wu X"

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Current Database

Current status

Sample type

Organism

Homo sapiens [86]
Synthetic construct [21]
Saccharomyces cerevisiae [17]
Arabidopsis thaliana [15]
Saccharomyces cerevisiae [13]
Escherichia coli [11]
Mus musculus [10]
Monkeypox virus [10]
Bacillus subtilis [9]
Geobacillus thermodenitrificans [9]
Vicugna pacos [7]
Lama glama [7]
Spodoptera frugiperda [6]
Human immunodeficiency virus 1 [5]
Human respiratory syncytial virus [4]
Pseudomonas aeruginosa [4]
Enterovirus d [4]
Escherichia coli [4]
Rattus norvegicus [3]
(no species) [3]
Bacterium [3]
Dna molecule [3]
(no species) [3]
Aequorea victoria [3]
Bos taurus [3]
Japanese encephalitis virus [2]
Synechocystis sp. pcc 6803 [2]
Streptococcus sp. [2]
Alphainfluenzavirus influenzae [2]
Human mastadenovirus c [2]
[eubacterium] siraeum [2]
Escherichia coli [2]
Chaetomium thermophilum [2]
Chlamydia pneumoniae [2]
(no species) [1]
Enterobacteria phage t4 [1]
Bacillus subtilis [1]
Severe acute respiratory syndrome coronavirus [1]
Haloarcula marismortui [1]
Enterovirus a [1]
Panax japonicus [1]
Aureobasidium pullulans [1]
Thermothelomyces thermophilus [1]
Gallus gallus [1]

EM Method

Resolution

Model molecular weight

Release Date

Author by name

Wu X [187]
Zhang Y [44]
Zhang Z [21]
Li L [19]
Baena V [18]
Canagarajah B [18]
Hammer JA [18]
Hinshaw JE [18]
Liu L [18]
Nyenhuis SB [18]
Shi J [18]
Stanton AE [18]
Strub MP [18]
Syed ZA [18]
Yim YI [18]
Deng Z [17]
Wang J [17]
Xu J [17]
Ai H [15]
Pan M [15]
Tong Z [15]
Wu Y [15]
Ai HS [14]
Feng Y [12]
Gong X [12]
Liang J [12]
Xie T [12]
You LL [12]
Dong F [11]
Fang C [11]
Li D [11]
Liu P [11]
Liu W [11]
Rapoport TA [11]
Wu XD [11]
Dong C [10]
Gao K [10]
Li W [10]
Song A [10]
Sun D [10]
Xu Y [10]
Yang B [10]
Yang Y [10]
You L [10]
Zhao X [10]
Zheng Q [10]
Cai H [9]
He Y [9]
Ma C [9]
Tong ZB [9]
Zhang T [9]
Song C [8]
Tao S [8]
Wang Y [8]
Xu Z [8]
Yang F [8]
Yang S [8]
Yue J [8]
Zhang C [8]
Zhang J [8]
Zhang K [8]
Dunn TM [7]
Fang CL [7]
Gable K [7]
Gao N [7]
Gupta SD [7]
Han G [7]
He D [7]
Lee S [7]
Li T [7]
Niranjanakumari S [7]
Ou X [7]
Shen L [7]
Sun M [7]
Wang R [7]
Wen A [7]
Chen J [6]
Gao S [6]
Gu Z [6]
Huang G [6]
Huang J [6]
Li JB [6]
Liang JM [6]
Liang L [6]
Lu M [6]
Lu P [6]
Ma D [6]
Shi JH [6]
Shi Q [6]
Tan H [6]
Tian C [6]
Wang D [6]
Xu M [6]
Chen Y [5]
Deng ZH [5]
Du X [5]
Fan M [5]
Fan MR [5]
Hummer G [5]
Lee J [5]

Author by ORCID

Zhang Y [23]
Wu X [23]
Wu X [22]
Nyenhuis SB [18]
Hinshaw JE [18]
Syed ZA [18]
Baena V [18]
Xu J [14]
Fang C [11]
Feng Y [11]
Rapoport TA [10]
Liu L [9]
Pan M [9]
Wu X [9]
Tong Z [9]
Ai H [9]
Xie T [9]
Gong X [9]
Wu X [9]
Deng Z [9]
He Y [8]
Liu P [8]
Zhang Z [7]
Dong C [7]
Xu Y [7]
Lu P [6]
Ma D [6]
Li L [6]
Zhang Y [6]
Hummer G [5]
Qian H [5]
Svetlov V [5]
Mi W [5]
Liao M [5]
Du X [5]
Su N [5]
Nudler E [5]
Yao X [5]
Ovchinnikov S [5]
Siggel M [5]
Wang J [5]
Fan M [5]
Zhang J [5]
Pronker MF [4]
Zhao M [4]
Lee S [4]
Wu X [4]
Cunningham KP [4]
Zhang H [4]
Dong F [4]
Dunn TM [4]
Han G [4]
Yao R [4]
Yue J [4]
Wan L [4]
Larsson HP [4]
De Haan Cam [4]
Niranjanakumari S [4]
Goldstein PA [4]
Kim ED [4]
Nimigean CM [4]
Accardi A [4]
Siborova M [4]
Cahoon EB [4]
Mahawar U [4]
Wattenberg BW [4]
Tang WJ [4]
Gable K [4]
Snijder J [4]
Zhang Z [4]
Xiao P [4]
Li W [4]
Huang K [4]
Schulte D [4]
Tibbs GR [4]
Wu X [4]
Gupta SD [4]
Mancl JM [4]
Wang J [4]
Di Zanni E [4]
Zhang T [4]
Perez ME [4]
Mao C [3]
Jiang YL [3]
Greulich H [3]
Han SJ [3]
Yu C [3]
Kong WW [3]
O'halloran TV [3]
Omollo EO [3]
Griffin PR [3]
Horner SW [3]
Landick R [3]
Mullahoo JP [3]
Zhou CZ [3]
Carr SA [3]
Chen Y [3]
Mcgaunn J [3]
Lyumkis D [3]
Fuller J [3]

Journal

Software

Microscope

Electron Source

Film or detector model

EMPIAR Experiment type

EMPIAR Image category

External links

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EMD-63884

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The 1:1 cryo-EM structure of BAP1/ASXL1-K351Ub in complex with H2AK119Ub nucleosome

Release date: Jan. 14, 2026
Resolution: 3.12 Å
EM Method: Single-particle
Fitted PDBs: 9u5u
Q-score: 0.462

Zhang T, Zheng J, Tong Z, Deng Z, He Z, Wu X, Wang M, Du Y, Xu Z, Tao S, Tian X, Deng H, Pan M, Ai H, Liu L

bioRxiv (2025) [ DOI: doi:10.1101/2025.04.25.650627 ]

EMD-61420

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The complex structure of Y510-9709 and NET determined with Cryo-EM

Release date: Dec. 24, 2025
Resolution: 2.98 Å
EM Method: Single-particle
Fitted PDBs: 9jel
Q-score: 0.53

Jia Y, Gao B, Tan J, Zheng J, Hong X, Zhu W, Tan H, Xiao Y, Tan L, Cai H, Huang Y, Deng Z, Wu X, Jin Y, Yuan Y, Tian J, He W, Ma W, Zhang Y, Liu L, Yan C, Zhang W, Lan Y

Science (2026) 391 pp. eads9530-eads9530 [ DOI: doi:10.1126/science.ads9530 Pubmed: 41505557 ]

EMD-61426

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The complex structure of 0086-0043 and NET determined with Cryo-EM.

Release date: Dec. 24, 2025
Resolution: 2.87 Å
EM Method: Single-particle
Fitted PDBs: 9jf3
Q-score: 0.588

Jia Y, Gao B, Tan J, Zheng J, Hong X, Zhu W, Tan H, Xiao Y, Tan L, Cai H, Huang Y, Deng Z, Wu X, Jin Y, Yuan Y, Tian J, He W, Ma W, Zhang Y, Liu L, Yan C, Zhang W, Lan Y

Science (2026) 391 pp. eads9530-eads9530 [ DOI: doi:10.1126/science.ads9530 Pubmed: 41505557 ]

EMD-63885

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The 2:1 map of BAP1/ASXL1-K351Ub in complex with H2AK119Ub nucleosome

Release date: Nov. 5, 2025
Resolution: 3.27 Å
EM Method: Single-particle

Zhang T, Zheng J, Tong Z, Deng Z, He Z, Wu X, Wang M, Du Y, Xu Z, Tao S, Tian X, Deng H, Pan M, Ai H, Liu L

bioRxiv (2025) [ DOI: doi:10.1101/2025.04.25.650627 ]

EMD-52446

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RSV-F postfusion trimer with no 131-2a bound

Release date: Aug. 6, 2025
Resolution: 3.1 Å
EM Method: Single-particle

Peng W, Siborova M, Wu X, Du W, Schulte D, Pronker MF, de Haan CAM, Snijder J

Acs Infect Dis. (2025) 11 pp. 2357-2366 [ DOI: doi:10.1021/acsinfecdis.5c00368 Pubmed: 40693554 ]

EMD-52447

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RSV-F postfusion trimer with one 131-2a Fab bound

Release date: Aug. 6, 2025
Resolution: 3.2 Å
EM Method: Single-particle

Peng W, Siborova M, Wu X, Du W, Schulte D, Pronker MF, de Haan CAM, Snijder J

Acs Infect Dis. (2025) 11 pp. 2357-2366 [ DOI: doi:10.1021/acsinfecdis.5c00368 Pubmed: 40693554 ]

EMD-52448

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RSV-F postfusion trimer with two 131-2a Fabs bound

Release date: Aug. 6, 2025
Resolution: 3.3 Å
EM Method: Single-particle

Peng W, Siborova M, Wu X, Du W, Schulte D, Pronker MF, de Haan CAM, Snijder J

Acs Infect Dis. (2025) 11 pp. 2357-2366 [ DOI: doi:10.1021/acsinfecdis.5c00368 Pubmed: 40693554 ]

EMD-62292

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cryo-EM structure of TRIP12 in complex with K29/48 branched-triUb

Release date: Aug. 6, 2025
Resolution: 3.63 Å
EM Method: Single-particle
Fitted PDBs: 9ken

Wu X, Ai H, Mao J, Cai H, Liang LJ, Tong Z, Deng Z, Zheng Q, Liu L, Pan M

Nat Commun (2025) 16 pp. 4313-4313 [ Pubmed: 40341121 DOI: doi:10.1038/s41467-025-59569-6 ]

EMD-62353

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Cryo-EM structure of Ufd2/Ubc4-Ub in complex with K29-linked diUb monomeric conformation

Release date: July 30, 2025
Resolution: 4.31 Å
EM Method: Single-particle
Fitted PDBs: 9khs
Q-score: 0.195

Tong Z, Wu X, Cai H, Wu S, Zhang T, Deng Z, Xu Z, Yuan R, Ai H, Liu L, Pan M

Nat Chem Biol (2025) [ DOI: doi:10.1038/s41589-025-01985-2 Pubmed: 40817136 ]

EMD-62354

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cryo-EM structure of Ufd2/Ubc4-Ub in complex with K29-linked triUb dimeric conformation

Release date: July 30, 2025
Resolution: 4.85 Å
EM Method: Single-particle
Fitted PDBs: 9kht
Q-score: 0.264

Tong Z, Wu X, Cai H, Wu S, Zhang T, Deng Z, Xu Z, Yuan R, Ai H, Liu L, Pan M

Nat Chem Biol (2025) [ DOI: doi:10.1038/s41589-025-01985-2 Pubmed: 40817136 ]

Sort by: Download

Showing 1 - 10 of 188. Page 1 of 19

Display:

Statistics

Download

Select database:

EMDB [186]
EMPIAR [2]

Format:

Select the script type:

Shell (Unix-based) Batch (Windows-based)

Preview first 10

Download

Filter By

Current Database

Current status

Sample type

Organism

Homo sapiens [86]
Synthetic construct [21]
Saccharomyces cerevisiae [17]
Arabidopsis thaliana [15]
Saccharomyces cerevisiae [13]
Escherichia coli [11]
Mus musculus [10]
Monkeypox virus [10]
Bacillus subtilis [9]
Geobacillus thermodenitrificans [9]
Vicugna pacos [7]
Lama glama [7]
Spodoptera frugiperda [6]
Human immunodeficiency virus 1 [5]
Human respiratory syncytial virus [4]
Pseudomonas aeruginosa [4]
Enterovirus d [4]
Escherichia coli [4]
Rattus norvegicus [3]
(no species) [3]
Bacterium [3]
Dna molecule [3]
(no species) [3]
Aequorea victoria [3]
Bos taurus [3]
Japanese encephalitis virus [2]
Synechocystis sp. pcc 6803 [2]
Streptococcus sp. [2]
Alphainfluenzavirus influenzae [2]
Human mastadenovirus c [2]
[eubacterium] siraeum [2]
Escherichia coli [2]
Chaetomium thermophilum [2]
Chlamydia pneumoniae [2]
(no species) [1]
Enterobacteria phage t4 [1]
Bacillus subtilis [1]
Severe acute respiratory syndrome coronavirus [1]
Haloarcula marismortui [1]
Enterovirus a [1]
Panax japonicus [1]
Aureobasidium pullulans [1]
Thermothelomyces thermophilus [1]
Gallus gallus [1]

EM Method

Resolution

Model molecular weight

Release Date

Author by name

Wu X [187]
Zhang Y [44]
Zhang Z [21]
Li L [19]
Baena V [18]
Canagarajah B [18]
Hammer JA [18]
Hinshaw JE [18]
Liu L [18]
Nyenhuis SB [18]
Shi J [18]
Stanton AE [18]
Strub MP [18]
Syed ZA [18]
Yim YI [18]
Deng Z [17]
Wang J [17]
Xu J [17]
Ai H [15]
Pan M [15]
Tong Z [15]
Wu Y [15]
Ai HS [14]
Feng Y [12]
Gong X [12]
Liang J [12]
Xie T [12]
You LL [12]
Dong F [11]
Fang C [11]
Li D [11]
Liu P [11]
Liu W [11]
Rapoport TA [11]
Wu XD [11]
Dong C [10]
Gao K [10]
Li W [10]
Song A [10]
Sun D [10]
Xu Y [10]
Yang B [10]
Yang Y [10]
You L [10]
Zhao X [10]
Zheng Q [10]
Cai H [9]
He Y [9]
Ma C [9]
Tong ZB [9]
Zhang T [9]
Song C [8]
Tao S [8]
Wang Y [8]
Xu Z [8]
Yang F [8]
Yang S [8]
Yue J [8]
Zhang C [8]
Zhang J [8]
Zhang K [8]
Dunn TM [7]
Fang CL [7]
Gable K [7]
Gao N [7]
Gupta SD [7]
Han G [7]
He D [7]
Lee S [7]
Li T [7]
Niranjanakumari S [7]
Ou X [7]
Shen L [7]
Sun M [7]
Wang R [7]
Wen A [7]
Chen J [6]
Gao S [6]
Gu Z [6]
Huang G [6]
Huang J [6]
Li JB [6]
Liang JM [6]
Liang L [6]
Lu M [6]
Lu P [6]
Ma D [6]
Shi JH [6]
Shi Q [6]
Tan H [6]
Tian C [6]
Wang D [6]
Xu M [6]
Chen Y [5]
Deng ZH [5]
Du X [5]
Fan M [5]
Fan MR [5]
Hummer G [5]
Lee J [5]

Author by ORCID

Zhang Y [23]
Wu X [23]
Wu X [22]
Nyenhuis SB [18]
Hinshaw JE [18]
Syed ZA [18]
Baena V [18]
Xu J [14]
Fang C [11]
Feng Y [11]
Rapoport TA [10]
Liu L [9]
Pan M [9]
Wu X [9]
Tong Z [9]
Ai H [9]
Xie T [9]
Gong X [9]
Wu X [9]
Deng Z [9]
He Y [8]
Liu P [8]
Zhang Z [7]
Dong C [7]
Xu Y [7]
Lu P [6]
Ma D [6]
Li L [6]
Zhang Y [6]
Hummer G [5]
Qian H [5]
Svetlov V [5]
Mi W [5]
Liao M [5]
Du X [5]
Su N [5]
Nudler E [5]
Yao X [5]
Ovchinnikov S [5]
Siggel M [5]
Wang J [5]
Fan M [5]
Zhang J [5]
Pronker MF [4]
Zhao M [4]
Lee S [4]
Wu X [4]
Cunningham KP [4]
Zhang H [4]
Dong F [4]
Dunn TM [4]
Han G [4]
Yao R [4]
Yue J [4]
Wan L [4]
Larsson HP [4]
De Haan Cam [4]
Niranjanakumari S [4]
Goldstein PA [4]
Kim ED [4]
Nimigean CM [4]
Accardi A [4]
Siborova M [4]
Cahoon EB [4]
Mahawar U [4]
Wattenberg BW [4]
Tang WJ [4]
Gable K [4]
Snijder J [4]
Zhang Z [4]
Xiao P [4]
Li W [4]
Huang K [4]
Schulte D [4]
Tibbs GR [4]
Wu X [4]
Gupta SD [4]
Mancl JM [4]
Wang J [4]
Di Zanni E [4]
Zhang T [4]
Perez ME [4]
Mao C [3]
Jiang YL [3]
Greulich H [3]
Han SJ [3]
Yu C [3]
Kong WW [3]
O'halloran TV [3]
Omollo EO [3]
Griffin PR [3]
Horner SW [3]
Landick R [3]
Mullahoo JP [3]
Zhou CZ [3]
Carr SA [3]
Chen Y [3]
Mcgaunn J [3]
Lyumkis D [3]
Fuller J [3]

Journal

Software

Microscope

Electron Source

Film or detector model

EMPIAR Experiment type

EMPIAR Image category

External links