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Current Database

  • EMDB [162]

Current status

  • REL [162]

Sample type

  • Complex [155]
  • Protein [146]
  • Ligand [92]
  • Virus [5]
  • DNA [3]
  • Other [2]
  • Sample [2]

Organism

  • Homo sapiens [115]
  • Synthetic construct [36]
  • Mus musculus [33]
  • Severe acute respiratory syndrome coronavirus [30]
  • Bos taurus [18]
  • Rattus norvegicus [13]
  • Lama glama [11]
  • Sus scrofa [6]
  • Escherichia phage lambda [5]
  • Severe acute respiratory syndrome coronavirus [2]
  • Geobacter sulfurreducens [2]
  • Acinetobacter baumannii [2]
  • Anaplasma marginale [2]
  • (no species) [2]
  • (no species) [1]
  • Saccharomyces cerevisiae [1]
  • Streptomyces avidinii [1]
  • Saccharomyces cerevisiae [1]
  • Bacteroides fragilis [1]

EM Method

  • Single-particle [152]
  • Helical reconstruction [8]
  • Subtomogram averaging [2]

Resolution

  • ≥ 2Å and < 3Å [65]
  • ≥ 3Å and < 4Å [75]
  • ≥ 4Å and < 5Å [13]
  • ≥ 5Å and < 6Å [2]
  • ≥ 6Å and < 8Å [2]
  • ≥ 16Å and < 20Å [1]
  • ≥ 20Å and < 30Å [3]
  • ≥ 30Å [1]

Model molecular weight

  • 0-50 kDa [3]
  • 50-100 kDa [20]
  • 100-250 kDa [71]
  • 250-500 kDa [13]
  • 500-1000 kDa [19]
  • 1-2 MDa [4]

Release Date

  • 2026 [27]
  • 2025 [41]
  • 2024 [26]
  • 2023 [26]
  • 2022 [26]
  • 2021 [5]
  • 2020 [3]
  • 2019 [4]
  • 2018 [2]
  • 2016 [2]

Author by name

  • Wu K [147]
  • Xu HE [82]
  • He X [58]
  • Yuan Q [56]
  • Hu W [53]
  • Xu Y [42]
  • Wu C [40]
  • Li X [35]
  • Jiang Y [31]
  • Cheng X [28]
  • Liu H [26]
  • Yin W [26]
  • Wang X [25]
  • Wang Y [21]
  • Li Y [20]
  • Zhang H [20]
  • Yang D [19]
  • Zhang Y [19]
  • Cao X [18]
  • Deng SJ [18]
  • Gu C [18]
  • Liu J [18]
  • Xu J [18]
  • Li S [17]
  • Wang Z [15]
  • Wu K-P [15]
  • Fan W [13]
  • Huang S [13]
  • Liu Z [13]
  • Shan H [13]
  • Wang J [13]
  • Wu Y [13]
  • Xu P [13]
  • Zhao L [13]
  • Zhao LH [13]
  • Zhuang Y [13]
  • Li J [12]
  • Chen P-T [11]
  • Jiang H [11]
  • Jiang M [11]
  • Dai A [10]
  • Wang D [10]
  • Zhang J [10]
  • Gao X [9]
  • He Q [9]
  • Shen Y [9]
  • Wang MW [9]
  • Wu J [9]
  • Zhang X [9]
  • Zhao C [9]
  • Baker D [8]
  • Duan J [8]
  • Gao T [8]
  • Guo S [8]
  • Huang Z [8]
  • Ji Y [8]
  • Jia F [8]
  • Jin S [8]
  • Liu P [8]
  • Luo P [8]
  • Song B [8]
  • Xia K [8]
  • Xie X [8]
  • Zheng J [8]
  • Zhu S [8]
  • Cao M [7]
  • Chen B [7]
  • Cheng H [7]
  • Ding F [7]
  • Gu Y [7]
  • Guo W [7]
  • Huang J [7]
  • Jia X [7]
  • Lan P [7]
  • Lei M [7]
  • Liu N [7]
  • Ma S [7]
  • Meng F [7]
  • Pan B [7]
  • Peng H [7]
  • Sun L [7]
  • Sun S [7]
  • Sun W [7]
  • Wang HW [7]
  • Wang W [7]
  • Wu CR [7]
  • Xing S [7]
  • Yang G [7]
  • Yao D [7]
  • Yuan QN [7]
  • Zhao Y [7]
  • Zheng L [7]
  • Zhou X [7]
  • Addetia A [6]
  • Bailey AL [6]
  • Bloom JD [6]
  • Bowen JE [6]
  • Boyken SE [6]
  • Cai X [6]
  • Cao L [6]

Author by ORCID

  • Xu HE [60]
  • Xu Y [39]
  • He X [37]
  • Yin W [26]
  • Deng SJ [18]
  • Wu C [18]
  • Yang D [15]
  • Cheng X [15]
  • Jiang Y [14]
  • Cheng X [12]
  • Jiang H [11]
  • Xu J [11]
  • Liu H [10]
  • Zhuang Y [10]
  • Wang Y [10]
  • Zhang H [10]
  • Wu K-P [9]
  • Chen P-T [9]
  • Huang S [8]
  • Zheng J [8]
  • Gu C [8]
  • Huang Z [8]
  • Xia K [8]
  • Wang Z [8]
  • Wang X [8]
  • Wang X [8]
  • Song B [8]
  • Cao X [8]
  • Xie X [8]
  • Xu P [8]
  • Liu Z [7]
  • Pan B [7]
  • Ding F [7]
  • Wang HW [7]
  • Lei M [7]
  • Wu J [7]
  • Wang X [7]
  • Wu K [7]
  • Zhao LH [7]
  • Lan P [7]
  • Zhou X [7]
  • Sun L [7]
  • Peng H [7]
  • Liu N [7]
  • Zhao C [7]
  • Wu Y [7]
  • Cheng H [7]
  • Zheng L [7]
  • Chow CM [6]
  • Navarro MJ [6]
  • Wang MW [6]
  • Addetia A [6]
  • Starr TN [6]
  • Case JB [6]
  • Matochko WL [6]
  • Vogeli B [6]
  • Baker D [6]
  • Liu Z [6]
  • Helms L [6]
  • Zhao YT [6]
  • Hunt AC [6]
  • Saini S [6]
  • Shen H [6]
  • Ljubetic A [6]
  • Ravichandran R [6]
  • Panpradist N [6]
  • Kafai NM [6]
  • Hsiang TY [6]
  • Wu K [6]
  • Chen RE [6]
  • Boyken SE [6]
  • Ruohola-baker H [6]
  • Veesler D [6]
  • Gale Jr M [6]
  • Bailey AL [6]
  • Duan D [6]
  • Edman N [6]
  • Johnson M [6]
  • Kruger A [6]
  • Ma S [6]
  • Diamond MS [6]
  • Wang JJ [6]
  • Vanblargan LA [6]
  • Yeh HW [6]
  • Goreshnik I [6]
  • Ying B [6]
  • Walls AC [6]
  • Ueda G [6]
  • Carter L [6]
  • Bloom JD [6]
  • Whelan SPJ [6]
  • Park YJ [6]
  • Jewett MC [6]
  • Bowen JE [6]
  • Cao L [6]
  • Stewart L [6]
  • Fan W [6]
  • Wang J [5]
  • Duan J [5]
  • Zhou H [5]

Journal

  • NAT COMMUN [20]
  • CELL RES [16]
  • PNAS [16]
  • TO BE PUBLISHED [16]
  • NATURE [11]
  • SCIENCE [11]
  • ACTA PHARMACOL.SIN. [9]
  • CELL DISCOV [9]
  • CELL REP [8]
  • EMBO J [8]
  • CURR BIOL [6]
  • SCI TRANSL MED [6]
  • CELL [5]
  • J VIROL [5]
  • NEURON [4]
  • SCI ADV [4]
  • MOL CELL [3]
  • ISCIENCE [2]
  • ANGEW CHEM INT ED ENGL [1]
  • BIORXIV [1]
  • ELIFE [1]

Software

  • CRYOSPARC [31]
  • RELION [14]
  • EMAN2 [2]

Microscope

  • FEI TITAN KRIOS [80]
  • TFS KRIOS [49]
  • TFS GLACIOS [9]
  • FEI TALOS ARCTICA [8]
  • FEI/PHILIPS CM300FEG/T [7]
  • FEI TITAN [5]
  • FEI TECNAI ARCTICA [2]
  • FEI TECNAI F20 [2]

Electron Source

  • FIELD EMISSION GUN [160]
  • OTHER [2]

Film or detector model

  • GATAN K3 6K X 4K [64]
  • GATAN K3 BIOQUANTUM 6K X 4K [46]
  • FEI FALCON IV 4K X 4K [19]
  • GATAN K2 SUMMIT 4K X 4K [19]
  • GATAN K3 BIOCONTINUUM 6K X 4K [7]
  • GATAN K2 QUANTUM 4K X 4K [3]
  • FEI CETA 4K X 4K [2]
  • FEI FALCON II 4K X 4K [2]

External links

  • PDB [155]
  • PDBe-Kb [132]
  • UniProt [132]
  • AlphaFold DB [127]
  • Pfam [125]
  • Gene Ontology [117]
  • InterPro [109]
  • ChEBI [75]
  • ChEMBL [73]
  • DrugBank [65]
  • Complex Portal [40]
  • EMPIAR [11]
  • CATH [2]
Sort by: Download
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EMD-58124
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3D View
In situ subtomogram average of a ribosome bound to ribosome associated vesicle in primary neurons expressing KDEL tagged with mNeonGreen mNeon-KDEL
CryoEM
Release date: June 3, 2026
Resolution: 22.0 Å
EM Method: Subtomogram averaging

Martin-Solana E, Carter SD, Donahue EKF, Ning J, Glausier JR, Preisegger MA, Eisenman L, Joseph PN, Bouchet-Marquis C, Wu K, Mobini CL, Frantz AN, Puig S, Hampton CM, Kabbani N, Jensen GJ, Watkins SC, Deisseroth K, Fenno LE, Gold MS, Wills ZP, Burkewitz K, Das S, Freyberg Z

bioRxiv (2024) [ Pubmed: 38895376 DOI: doi:10.1101/2024.06.07.598007 ]

EMD-66516
Download Map
3D View
AR234958 bound Mas1 Receptor Complex
CryoEM
Release date: May 20, 2026
Resolution: 3.07 Å
EM Method: Single-particle
Fitted PDBs: 9x40
Q-score: 0.478

Zhang Y, Wang Q, Liu H, Shan H, Gu Y, Yang J, Gao Y, Wu K, Yang D, Xu HE

EMBO J (2026) 45 pp. 3500-3513 [ DOI: doi:10.1038/s44318-026-00764-6 Pubmed: 41912627 ]

EMD-66517
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3D View
AR234958 bound Mas1 Receptor
CryoEM
Release date: May 20, 2026
Resolution: 3.31 Å
EM Method: Single-particle
Fitted PDBs: 9x41
Q-score: 0.462

Zhang Y, Wang Q, Liu H, Shan H, Gu Y, Yang J, Gao Y, Wu K, Yang D, Xu HE

EMBO J (2026) 45 pp. 3500-3513 [ DOI: doi:10.1038/s44318-026-00764-6 Pubmed: 41912627 ]

EMD-70605
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3D View
Two Component Protein Nano-Particle T 3 . De Novo Design, Computationally Relaxed into Low Resolution Single Particle CryoEM Map with Icosahedral Symmetry Applied
CryoEM
Release date: May 20, 2026
Resolution: 17.45 Å
EM Method: Single-particle
Fitted PDBs: 9om3
Q-score: 0.053

Wang S, Xie Y, Chemielewski D, Weidle C, Shu T, Ahn G, Kibler RD, Hernandez C, Chen W, Duran DC, Carr A, Bera AK, Lee S, Decarreau J, Kang A, Brackenbrough E, Joyce E, Wu K, Borst AJ, Favor A, Huang B, DiMaio F, Holt LJ, Baker D

Nature (2026) [ DOI: doi:10.1038/s41586-026-10464-0 Pubmed: 42162421 ]

EMD-70685
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3D View
Two Component Protein Nano-Particle T 3 . De Novo Design, Computationally Relaxed into Low Resolution Subtomogram Averaged CryoEM Map with Icosahedral Symmetry Applied
CryoEM
Release date: May 20, 2026
Resolution: 31.6 Å
EM Method: Subtomogram averaging
Fitted PDBs: 9op9
Q-score: 0.058

Wang S, Xie Y, Chemielewski D, Weidle C, Shu T, Ahn G, Kibler RD, Hernandez C, Chen W, Duran DC, Carr A, Bera AK, Lee S, Decarreau J, Kang A, Brackenbrough E, Joyce E, Wu K, Borst AJ, Favor A, Huang B, DiMaio F, Holt LJ, Baker D

Nature (2026) [ DOI: doi:10.1038/s41586-026-10464-0 Pubmed: 42162421 ]

EMD-68208
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3D View
Gi bound kappa-opioid receptor in complex with beta01
CryoEM
Release date: May 6, 2026
Resolution: 2.86 Å
EM Method: Single-particle
Fitted PDBs: 22em
Q-score: 0.398

Zhang H, Wang R, Shi P, He X, Zhu Q, Xu Y, Yuan Q, Hu W, Wu K, Zheng Y, Zhou L, Liang J, Lv P, Xu Z, Zhuang Y, Xu H, Wang Y, Tian C

To Be Published

EMD-68217
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Gi bound kappa-opioid receptor in complex with difelikefalin
CryoEM
Release date: May 6, 2026
Resolution: 2.43 Å
EM Method: Single-particle
Fitted PDBs: 22es
Q-score: 0.548

Zhang H, Wang R, Shi P, He X, Zhu Q, Xu Y, Yuan Q, Hu W, Wu K, Zheng Y, Zhou L, Liang J, Lv P, Xu Z, Zhuang Y, Xu H, Wang Y, Tian C

To Be Published

EMD-66514
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3D View
NPFF bound Mas1 Receptor
CryoEM
Release date: April 15, 2026
Resolution: 2.77 Å
EM Method: Single-particle
Fitted PDBs: 9x3y
Q-score: 0.592

Zhang Y, Wang Q, Liu H, Shan H, Gu Y, Yang J, Gao Y, Wu K, Yang D, Xu HE

EMBO J (2026) 45 pp. 3500-3513 [ DOI: doi:10.1038/s44318-026-00764-6 Pubmed: 41912627 ]

EMD-66515
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3D View
NPFF bound Mas1 Receptor Complex
CryoEM
Release date: April 15, 2026
Resolution: 2.54 Å
EM Method: Single-particle
Fitted PDBs: 9x3z
Q-score: 0.595

Zhang Y, Wang Q, Liu H, Shan H, Gu Y, Yang J, Gao Y, Wu K, Yang D, Xu HE

EMBO J (2026) 45 pp. 3500-3513 [ DOI: doi:10.1038/s44318-026-00764-6 Pubmed: 41912627 ]

EMD-63788
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3D View
Cryo-EM structure of Human UBA1-UBE2O-Ub -Transthiolation state 4
CryoEM
Release date: March 25, 2026
Resolution: 3.32 Å
EM Method: Single-particle
Fitted PDBs: 9mc4
Q-score: 0.395

Chen P-T, Wu K-P

To Be Published

Sort by: Download
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Filter By

Current Database

  • EMDB [162]

Current status

  • REL [162]

Sample type

  • Complex [155]
  • Protein [146]
  • Ligand [92]
  • Virus [5]
  • DNA [3]
  • Other [2]
  • Sample [2]

Organism

  • Homo sapiens [115]
  • Synthetic construct [36]
  • Mus musculus [33]
  • Severe acute respiratory syndrome coronavirus [30]
  • Bos taurus [18]
  • Rattus norvegicus [13]
  • Lama glama [11]
  • Sus scrofa [6]
  • Escherichia phage lambda [5]
  • Severe acute respiratory syndrome coronavirus [2]
  • Geobacter sulfurreducens [2]
  • Acinetobacter baumannii [2]
  • Anaplasma marginale [2]
  • (no species) [2]
  • (no species) [1]
  • Saccharomyces cerevisiae [1]
  • Streptomyces avidinii [1]
  • Saccharomyces cerevisiae [1]
  • Bacteroides fragilis [1]

EM Method

  • Single-particle [152]
  • Helical reconstruction [8]
  • Subtomogram averaging [2]

Resolution

  • ≥ 2Å and < 3Å [65]
  • ≥ 3Å and < 4Å [75]
  • ≥ 4Å and < 5Å [13]
  • ≥ 5Å and < 6Å [2]
  • ≥ 6Å and < 8Å [2]
  • ≥ 16Å and < 20Å [1]
  • ≥ 20Å and < 30Å [3]
  • ≥ 30Å [1]

Model molecular weight

  • 0-50 kDa [3]
  • 50-100 kDa [20]
  • 100-250 kDa [71]
  • 250-500 kDa [13]
  • 500-1000 kDa [19]
  • 1-2 MDa [4]

Release Date

  • 2026 [27]
  • 2025 [41]
  • 2024 [26]
  • 2023 [26]
  • 2022 [26]
  • 2021 [5]
  • 2020 [3]
  • 2019 [4]
  • 2018 [2]
  • 2016 [2]

Author by name

  • Wu K [147]
  • Xu HE [82]
  • He X [58]
  • Yuan Q [56]
  • Hu W [53]
  • Xu Y [42]
  • Wu C [40]
  • Li X [35]
  • Jiang Y [31]
  • Cheng X [28]
  • Liu H [26]
  • Yin W [26]
  • Wang X [25]
  • Wang Y [21]
  • Li Y [20]
  • Zhang H [20]
  • Yang D [19]
  • Zhang Y [19]
  • Cao X [18]
  • Deng SJ [18]
  • Gu C [18]
  • Liu J [18]
  • Xu J [18]
  • Li S [17]
  • Wang Z [15]
  • Wu K-P [15]
  • Fan W [13]
  • Huang S [13]
  • Liu Z [13]
  • Shan H [13]
  • Wang J [13]
  • Wu Y [13]
  • Xu P [13]
  • Zhao L [13]
  • Zhao LH [13]
  • Zhuang Y [13]
  • Li J [12]
  • Chen P-T [11]
  • Jiang H [11]
  • Jiang M [11]
  • Dai A [10]
  • Wang D [10]
  • Zhang J [10]
  • Gao X [9]
  • He Q [9]
  • Shen Y [9]
  • Wang MW [9]
  • Wu J [9]
  • Zhang X [9]
  • Zhao C [9]
  • Baker D [8]
  • Duan J [8]
  • Gao T [8]
  • Guo S [8]
  • Huang Z [8]
  • Ji Y [8]
  • Jia F [8]
  • Jin S [8]
  • Liu P [8]
  • Luo P [8]
  • Song B [8]
  • Xia K [8]
  • Xie X [8]
  • Zheng J [8]
  • Zhu S [8]
  • Cao M [7]
  • Chen B [7]
  • Cheng H [7]
  • Ding F [7]
  • Gu Y [7]
  • Guo W [7]
  • Huang J [7]
  • Jia X [7]
  • Lan P [7]
  • Lei M [7]
  • Liu N [7]
  • Ma S [7]
  • Meng F [7]
  • Pan B [7]
  • Peng H [7]
  • Sun L [7]
  • Sun S [7]
  • Sun W [7]
  • Wang HW [7]
  • Wang W [7]
  • Wu CR [7]
  • Xing S [7]
  • Yang G [7]
  • Yao D [7]
  • Yuan QN [7]
  • Zhao Y [7]
  • Zheng L [7]
  • Zhou X [7]
  • Addetia A [6]
  • Bailey AL [6]
  • Bloom JD [6]
  • Bowen JE [6]
  • Boyken SE [6]
  • Cai X [6]
  • Cao L [6]

Author by ORCID

  • Xu HE [60]
  • Xu Y [39]
  • He X [37]
  • Yin W [26]
  • Deng SJ [18]
  • Wu C [18]
  • Yang D [15]
  • Cheng X [15]
  • Jiang Y [14]
  • Cheng X [12]
  • Jiang H [11]
  • Xu J [11]
  • Liu H [10]
  • Zhuang Y [10]
  • Wang Y [10]
  • Zhang H [10]
  • Wu K-P [9]
  • Chen P-T [9]
  • Huang S [8]
  • Zheng J [8]
  • Gu C [8]
  • Huang Z [8]
  • Xia K [8]
  • Wang Z [8]
  • Wang X [8]
  • Wang X [8]
  • Song B [8]
  • Cao X [8]
  • Xie X [8]
  • Xu P [8]
  • Liu Z [7]
  • Pan B [7]
  • Ding F [7]
  • Wang HW [7]
  • Lei M [7]
  • Wu J [7]
  • Wang X [7]
  • Wu K [7]
  • Zhao LH [7]
  • Lan P [7]
  • Zhou X [7]
  • Sun L [7]
  • Peng H [7]
  • Liu N [7]
  • Zhao C [7]
  • Wu Y [7]
  • Cheng H [7]
  • Zheng L [7]
  • Chow CM [6]
  • Navarro MJ [6]
  • Wang MW [6]
  • Addetia A [6]
  • Starr TN [6]
  • Case JB [6]
  • Matochko WL [6]
  • Vogeli B [6]
  • Baker D [6]
  • Liu Z [6]
  • Helms L [6]
  • Zhao YT [6]
  • Hunt AC [6]
  • Saini S [6]
  • Shen H [6]
  • Ljubetic A [6]
  • Ravichandran R [6]
  • Panpradist N [6]
  • Kafai NM [6]
  • Hsiang TY [6]
  • Wu K [6]
  • Chen RE [6]
  • Boyken SE [6]
  • Ruohola-baker H [6]
  • Veesler D [6]
  • Gale Jr M [6]
  • Bailey AL [6]
  • Duan D [6]
  • Edman N [6]
  • Johnson M [6]
  • Kruger A [6]
  • Ma S [6]
  • Diamond MS [6]
  • Wang JJ [6]
  • Vanblargan LA [6]
  • Yeh HW [6]
  • Goreshnik I [6]
  • Ying B [6]
  • Walls AC [6]
  • Ueda G [6]
  • Carter L [6]
  • Bloom JD [6]
  • Whelan SPJ [6]
  • Park YJ [6]
  • Jewett MC [6]
  • Bowen JE [6]
  • Cao L [6]
  • Stewart L [6]
  • Fan W [6]
  • Wang J [5]
  • Duan J [5]
  • Zhou H [5]

Journal

  • NAT COMMUN [20]
  • CELL RES [16]
  • PNAS [16]
  • TO BE PUBLISHED [16]
  • NATURE [11]
  • SCIENCE [11]
  • ACTA PHARMACOL.SIN. [9]
  • CELL DISCOV [9]
  • CELL REP [8]
  • EMBO J [8]
  • CURR BIOL [6]
  • SCI TRANSL MED [6]
  • CELL [5]
  • J VIROL [5]
  • NEURON [4]
  • SCI ADV [4]
  • MOL CELL [3]
  • ISCIENCE [2]
  • ANGEW CHEM INT ED ENGL [1]
  • BIORXIV [1]
  • ELIFE [1]

Software

  • CRYOSPARC [31]
  • RELION [14]
  • EMAN2 [2]

Microscope

  • FEI TITAN KRIOS [80]
  • TFS KRIOS [49]
  • TFS GLACIOS [9]
  • FEI TALOS ARCTICA [8]
  • FEI/PHILIPS CM300FEG/T [7]
  • FEI TITAN [5]
  • FEI TECNAI ARCTICA [2]
  • FEI TECNAI F20 [2]

Electron Source

  • FIELD EMISSION GUN [160]
  • OTHER [2]

Film or detector model

  • GATAN K3 6K X 4K [64]
  • GATAN K3 BIOQUANTUM 6K X 4K [46]
  • FEI FALCON IV 4K X 4K [19]
  • GATAN K2 SUMMIT 4K X 4K [19]
  • GATAN K3 BIOCONTINUUM 6K X 4K [7]
  • GATAN K2 QUANTUM 4K X 4K [3]
  • FEI CETA 4K X 4K [2]
  • FEI FALCON II 4K X 4K [2]

External links

  • PDB [155]
  • PDBe-Kb [132]
  • UniProt [132]
  • AlphaFold DB [127]
  • Pfam [125]
  • Gene Ontology [117]
  • InterPro [109]
  • ChEBI [75]
  • ChEMBL [73]
  • DrugBank [65]
  • Complex Portal [40]
  • EMPIAR [11]
  • CATH [2]