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author:"Wieferig JP"

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Current Database

  • EMDB [20]

Current status

  • REL [20]

Sample type

  • Ligand [20]
  • Protein [20]
  • Cellular component [18]
  • Complex [2]

Organism

  • Yarrowia lipolytica [18]
  • Bacillus subtilis [2]

EM Method

  • Single-particle [20]

Resolution

  • ≥ 2Å and < 3Å [10]
  • ≥ 3Å and < 4Å [10]

Model molecular weight

  • 100-250 kDa [2]
  • 500-1000 kDa [18]

Release Date

  • 2023 [20]

Author by name

  • Wieferig JP [20]
  • Kuhlbrandt W [18]
  • Corey RA [2]
  • Fuss MF [2]
  • Hanelt I [2]
  • Hellmich Y [2]
  • Sousa JS [2]
  • Stansfeld PJ [2]
  • Tascon I [2]
  • Vonck J [2]

Author by ORCID

  • Wieferig JP [18]
  • Vonck J [2]
  • Stansfeld PJ [2]
  • Hellmich Y [2]
  • Fuss MF [2]
  • Hanelt I [2]
  • Corey RA [2]
  • Tascon I [2]

Journal

  • IUCRJ [18]
  • BIORXIV [2]
  • NAT COMMUN [2]

Software

  • RELION [20]

Microscope

  • TFS KRIOS [18]
  • FEI TITAN KRIOS [2]

Electron Source

  • FIELD EMISSION GUN [20]

Film or detector model

  • GATAN K3 BIOQUANTUM 6K X 4K [20]

External links

  • AlphaFold DB [20]
  • ChEBI [20]
  • ChEMBL [20]
  • Gene Ontology [20]
  • InterPro [20]
  • PDB [20]
  • PDBe-Kb [20]
  • Pfam [20]
  • UniProt [20]
  • DrugBank [5]
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Showing 1 - 10 of 20. Page 1 of 2
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EMD-15894
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KimA from B. subtilis with nucleotide second-messenger c-di-AMP bound
CryoEM
Release date: Jan. 18, 2023
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 8b70
Q-score: 0.536
Similar entry percentile: 85%

Fuss MF, Wieferig JP, Corey RA, Hellmich Y, Tascon I, Sousa JS, Stansfeld PJ, Vonck J, Hanelt I

Nat Commun (2023) 14 pp. 3683-3683 [ DOI: doi:10.1038/s41467-023-38944-1 Pubmed: 37344476 ]

EMD-15895
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Upright KimA dimer with bound c-di-AMP from B. subtilis
CryoEM
Release date: Jan. 18, 2023
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 8b71
Q-score: 0.457
Similar entry percentile: 76%

Fuss MF, Wieferig JP, Corey RA, Hellmich Y, Tascon I, Sousa JS, Stansfeld PJ, Vonck J, Hanelt I

Nat Commun (2023) 14 pp. 3683-3683 [ DOI: doi:10.1038/s41467-023-38944-1 Pubmed: 37344476 ]

EMD-15312
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Complex III2 from Yarrowia lipolytica, combined datasets, consensus refinement
CryoEM
Release date: Jan. 11, 2023
Resolution: 2.0 Å
EM Method: Single-particle
Fitted PDBs: 8ab6
Q-score: 0.757
Similar entry percentile: 94%

Wieferig JP, Kuhlbrandt W

IUCrJ (2023) 10 pp. 27-37 [ DOI: doi:10.1107/S2052252522010570 Pubmed: 36598500 ]

EMD-15313
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Complex III2 from Yarrowia lipolytica, atovaquone and antimycin A bound
CryoEM
Release date: Jan. 11, 2023
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 8ab7
Q-score: 0.525
Similar entry percentile: 80%

Wieferig JP, Kuhlbrandt W

IUCrJ (2023) 10 pp. 27-37 [ DOI: doi:10.1107/S2052252522010570 Pubmed: 36598500 ]

EMD-15314
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Complex III2, b-position, with decylubiquinone and ascorbate-reduced
CryoEM
Release date: Jan. 11, 2023
Resolution: 2.6 Å
EM Method: Single-particle
Fitted PDBs: 8ab8
Q-score: 0.625
Similar entry percentile: 90%

Wieferig JP, Kuhlbrandt W

IUCrJ (2023) 10 pp. 27-37 [ DOI: doi:10.1107/S2052252522010570 Pubmed: 36598500 ]

EMD-15315
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Complex III2 from Yarrowia lipolytica, ascorbate-reduced, b-position
CryoEM
Release date: Jan. 11, 2023
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 8ab9
Q-score: 0.524
Similar entry percentile: 80%

Wieferig JP, Kuhlbrandt W

IUCrJ (2023) 10 pp. 27-37 [ DOI: doi:10.1107/S2052252522010570 Pubmed: 36598500 ]

EMD-15316
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Complex III2 from Yarrowia lipolytica, ascorbate-reduced, int-position
CryoEM
Release date: Jan. 11, 2023
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8aba
Q-score: 0.537
Similar entry percentile: 81%

Wieferig JP, Kuhlbrandt W

IUCrJ (2023) 10 pp. 27-37 [ DOI: doi:10.1107/S2052252522010570 Pubmed: 36598500 ]

EMD-15317
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Complex III2 from Yarrowia lipolytica, ascorbate-reduced, c-position
CryoEM
Release date: Jan. 11, 2023
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8abb
Q-score: 0.54
Similar entry percentile: 82%

Wieferig JP, Kuhlbrandt W

IUCrJ (2023) 10 pp. 27-37 [ DOI: doi:10.1107/S2052252522010570 Pubmed: 36598500 ]

EMD-15318
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Complex III2 from Yarrowia lipolytica, oxidised with ferricyanide, b-position
CryoEM
Release date: Jan. 11, 2023
Resolution: 2.3 Å
EM Method: Single-particle
Fitted PDBs: 8abe
Q-score: 0.656
Similar entry percentile: 85%

Wieferig JP, Kuhlbrandt W

IUCrJ (2023) 10 pp. 27-37 [ DOI: doi:10.1107/S2052252522010570 Pubmed: 36598500 ]

EMD-15319
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Complex III2 from Yarrowia lipolytica, oxidised with ferricyanide, int-position
CryoEM
Release date: Jan. 11, 2023
Resolution: 2.3 Å
EM Method: Single-particle
Fitted PDBs: 8abf
Q-score: 0.652
Similar entry percentile: 84%

Wieferig JP, Kuhlbrandt W

IUCrJ (2023) 10 pp. 27-37 [ DOI: doi:10.1107/S2052252522010570 Pubmed: 36598500 ]

Sort by: Download
Showing 1 - 10 of 20. Page 1 of 2
Display:
Statistics
×

Download


Preview 10 entries View All Download file

Filter By

Current Database

  • EMDB [20]

Current status

  • REL [20]

Sample type

  • Ligand [20]
  • Protein [20]
  • Cellular component [18]
  • Complex [2]

Organism

  • Yarrowia lipolytica [18]
  • Bacillus subtilis [2]

EM Method

  • Single-particle [20]

Resolution

  • ≥ 2Å and < 3Å [10]
  • ≥ 3Å and < 4Å [10]

Model molecular weight

  • 100-250 kDa [2]
  • 500-1000 kDa [18]

Release Date

  • 2023 [20]

Author by name

  • Wieferig JP [20]
  • Kuhlbrandt W [18]
  • Corey RA [2]
  • Fuss MF [2]
  • Hanelt I [2]
  • Hellmich Y [2]
  • Sousa JS [2]
  • Stansfeld PJ [2]
  • Tascon I [2]
  • Vonck J [2]

Author by ORCID

  • Wieferig JP [18]
  • Vonck J [2]
  • Stansfeld PJ [2]
  • Hellmich Y [2]
  • Fuss MF [2]
  • Hanelt I [2]
  • Corey RA [2]
  • Tascon I [2]

Journal

  • IUCRJ [18]
  • BIORXIV [2]
  • NAT COMMUN [2]

Software

  • RELION [20]

Microscope

  • TFS KRIOS [18]
  • FEI TITAN KRIOS [2]

Electron Source

  • FIELD EMISSION GUN [20]

Film or detector model

  • GATAN K3 BIOQUANTUM 6K X 4K [20]

External links

  • AlphaFold DB [20]
  • ChEBI [20]
  • ChEMBL [20]
  • Gene Ontology [20]
  • InterPro [20]
  • PDB [20]
  • PDBe-Kb [20]
  • Pfam [20]
  • UniProt [20]
  • DrugBank [5]