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author:"Wang YX"

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Current Database

  • EMDB [126]

Current status

  • REL [126]

Sample type

  • Ligand [122]
  • RNA [109]
  • Complex [86]
  • Protein [45]
  • Cellular component [40]

Organism

  • Geobacillus stearothermophilus [100]
  • Saccharomyces cerevisiae [7]
  • Sus scrofa [6]
  • Caldanaerobacter subterraneus [5]
  • Synthetic construct [3]
  • Severe acute respiratory syndrome coronavirus [2]
  • Mus musculus [1]
  • Bacillus subtilis [1]
  • Geobacillus stearothermophilus [1]
  • Arachis hypogaea [1]
  • Homo sapiens [1]

EM Method

  • Single-particle [126]

Resolution

  • ≥ 2Å and < 3Å [51]
  • ≥ 3Å and < 4Å [72]
  • ≥ 4Å and < 5Å [2]
  • ≥ 5Å and < 6Å [1]

Model molecular weight

  • 0-50 kDa [3]
  • 50-100 kDa [1]
  • 100-250 kDa [99]
  • 250-500 kDa [10]
  • 500-1000 kDa [1]

Release Date

  • 2026 [101]
  • 2025 [8]
  • 2024 [7]
  • 2023 [5]
  • 2022 [1]
  • 2021 [3]
  • 2019 [1]

Author by name

  • Wang YX [95]
  • Degenhardt MFS [82]
  • Stagno J [76]
  • Wang Y-X [48]
  • Stagno JR [32]
  • Lee Y-T [27]
  • Zhang J [25]
  • Bhoge BA [24]
  • Skeparnias I [24]
  • Frazao De Souza Degenhardt M [21]
  • Chen SY [17]
  • Lee YT [17]
  • Dyba MA [14]
  • Tarasov SG [14]
  • Yang GF [12]
  • Cui GR [11]
  • Chen S-Y [10]
  • Li ZW [10]
  • Wu QY [10]
  • Ye Y [10]
  • Zhu XL [10]
  • Deme JC [8]
  • Lea SM [8]
  • Yu P [8]
  • Dong Y [6]
  • Guan ZW [6]
  • Jiang JJ [6]
  • Shi XX [6]
  • Sun JY [6]
  • Wang F [6]
  • Zhang N [6]
  • Ding J [5]
  • Fan ED [4]
  • Fan L [4]
  • Fu YX [4]
  • Huang YH [4]
  • Lu ZW [4]
  • Wang JY [4]
  • Wei G [4]
  • Yu XH [4]
  • Chari R [3]
  • Dwivedi V [3]
  • Lee HK [3]
  • Young HA [3]
  • Cong Y [2]
  • Hong Q [2]
  • Chen M [1]
  • Chiu W [1]
  • Dong JQ [1]
  • Giarimoglou N [1]
  • Han WY [1]
  • Henderson FE [1]
  • Huang Z [1]
  • Lehmann J [1]
  • Li JW [1]
  • Li S [1]
  • Ludtke SJ [1]
  • Pintilie GD [1]
  • Stamatopoulou V [1]
  • Stathopoulos C [1]
  • Su C [1]
  • Su Z [1]
  • Wang YF [1]
  • Xiao JY [1]
  • Xu C [1]
  • Zhang C [1]
  • Zhang K [1]

Author by ORCID

  • Wang YX [77]
  • Stagno J [76]
  • Degenhardt MFS [70]
  • Wang Y-X [22]
  • Frazao De Souza Degenhardt M [21]
  • Stagno JR [20]
  • Zhang J [16]
  • Lee YT [14]
  • Yang GF [10]
  • Zhu XL [6]
  • Wang F [6]
  • Wu QY [6]
  • Deme JC [5]
  • Lea SM [5]
  • Ding J [5]
  • Fu YX [4]
  • Wang YX [4]
  • Ye Y [4]
  • Chari R [3]
  • Bhoge BA [1]
  • Lee Y-T [1]
  • Pintilie GD [1]
  • Ludtke SJ [1]
  • Giarimoglou N [1]
  • Stathopoulos C [1]
  • Chiu W [1]
  • Su Z [1]
  • Lehmann J [1]
  • Zhang K [1]
  • Skeparnias I [1]
  • Chen M [1]

Journal

  • TO BE PUBLISHED [93]
  • NAT COMMUN [18]
  • NUCLEIC ACIDS RES [8]
  • J AM CHEM SOC [6]
  • NAT STRUCT MOL BIOL [1]

Software

  • CRYOSPARC [93]
  • UCSF CHIMERAX [12]
  • RELION [1]

Microscope

  • TFS KRIOS [89]
  • FEI TALOS ARCTICA [26]
  • FEI TITAN KRIOS [11]

Electron Source

  • FIELD EMISSION GUN [126]

Film or detector model

  • FEI FALCON IV 4K X 4K [91]
  • GATAN K3 BIOQUANTUM 6K X 4K [23]
  • TFS FALCON 4I 4K X 4K [4]
  • GATAN K2 QUANTUM 4K X 4K [3]
  • GATAN K3 6K X 4K [3]
  • FEI EAGLE 4K X 4K [1]
  • FEI FALCON III 4K X 4K [1]

External links

  • PDB [116]
  • ChEBI [108]
  • DrugBank [101]
  • ChEMBL [41]
  • AlphaFold DB [37]
  • UniProt [37]
  • PDBe-Kb [16]
  • Pfam [16]
  • Gene Ontology [15]
  • InterPro [15]
  • Complex Portal [6]
Sort by: Download
Showing 1 - 10 of 126. Page 1 of 13
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EMD-63783
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3D View
Cryo-EM structure of human FcRL4 bound to IgA-Fc/J
CryoEM
Release date: June 10, 2026
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 9mbz
Q-score: 0.479

Wang YX, Su C, Xiao JY

To Be Published

EMD-70938
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3D View
Structure of Geobacillus stearothermophilus RNase P ribozyme in complex with precursor tRNA with non-complementary 5 leader sub-conformation 1 of tRNA anticodon arm tilted
CryoEM
Release date: June 10, 2026
Resolution: 2.93 Å
EM Method: Single-particle
Fitted PDBs: 9owo
Q-score: 0.429

Lee Y-T, Degenhardt MFS, Skeparnias I, Chen S-Y, Bhoge BA, Zhang J, Stagno JR, Wang Y-X

To Be Published

EMD-70939
Download Map
3D View
Structure of Geobacillus stearothermophilus RNase P ribozyme in complex with precursor tRNA with non-complementary 5 leader sub-conformation 2 of tRNA anticodon arm tilted
CryoEM
Release date: June 10, 2026
Resolution: 2.94 Å
EM Method: Single-particle
Fitted PDBs: 9owp
Q-score: 0.427

Lee Y-T, Degenhardt MFS, Skeparnias I, Chen S-Y, Bhoge BA, Zhang J, Stagno JR, Wang Y-X

To Be Published

EMD-70942
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3D View
Structure of Geobacillus stearothermophilus RNase P holoenzyme in 5 mM Mg2
CryoEM
Release date: June 10, 2026
Resolution: 2.87 Å
EM Method: Single-particle
Fitted PDBs: 9ows
Q-score: 0.394

Lee Y-T, Degenhardt MFS, Skeparnias I, Chen S-Y, Bhoge BA, Zhang J, Stagno JR, Wang Y-X

To Be Published

EMD-70943
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3D View
Structure of Geobacillus stearothermophilus RNase P holoenzyme in complex with precursor tRNA in 5 mM Ca2
CryoEM
Release date: June 10, 2026
Resolution: 2.82 Å
EM Method: Single-particle
Fitted PDBs: 9owt
Q-score: 0.446

Lee Y-T, Degenhardt MFS, Skeparnias I, Chen S-Y, Bhoge BA, Zhang J, Stagno JR, Wang Y-X

To Be Published

EMD-70944
Download Map
3D View
Structure of Geobacillus stearothermophilus RNase P holoenzyme in complex with precursor tRNA in 1 mM Ca2
CryoEM
Release date: June 10, 2026
Resolution: 2.93 Å
EM Method: Single-particle
Fitted PDBs: 9owu
Q-score: 0.402

Lee Y-T, Degenhardt MFS, Skeparnias I, Chen S-Y, Bhoge BA, Zhang J, Stagno JR, Wang Y-X

To Be Published

EMD-70945
Download Map
3D View
Structure of Geobacillus stearothermophilus RNase P holoenzyme in complex with mature tRNA in 5 mM Ca2
CryoEM
Release date: June 10, 2026
Resolution: 3.02 Å
EM Method: Single-particle
Fitted PDBs: 9owv
Q-score: 0.389

Lee Y-T, Degenhardt MFS, Skeparnias I, Chen S-Y, Bhoge BA, Zhang J, Stagno JR, Wang Y-X

To Be Published

EMD-70946
Download Map
3D View
Structure of Geobacillus stearothermophilus RNase P holoenzyme in complex with the precursor tRNA with non-complementary 5 leader
CryoEM
Release date: June 10, 2026
Resolution: 2.83 Å
EM Method: Single-particle
Fitted PDBs: 9oww
Q-score: 0.437

Lee Y-T, Degenhardt MFS, Skeparnias I, Chen S-Y, Bhoge BA, Zhang J, Stagno JR, Wang Y-X

To Be Published

EMD-70947
Download Map
3D View
Structure of Geobacillus stearothermophilus RNase P holoenzyme in complex with the precursor tRNA with loop-back 5 leader sub-conformation 1 of tRNA anticodon arm tilted
CryoEM
Release date: June 10, 2026
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 9owx
Q-score: 0.466

Lee Y-T, Degenhardt MFS, Skeparnias I, Chen S-Y, Bhoge BA, Zhang J, Stagno JR, Wang Y-X

To Be Published

EMD-70948
Download Map
3D View
Structure of Geobacillus stearothermophilus RNase P holoenzyme in complex with the precursor tRNA with loop-back 5 leader sub-conformation 2 of tRNA anticodon arm tilted
CryoEM
Release date: June 10, 2026
Resolution: 2.69 Å
EM Method: Single-particle
Fitted PDBs: 9owy
Q-score: 0.474

Lee Y-T, Degenhardt MFS, Skeparnias I, Chen S-Y, Bhoge BA, Zhang J, Stagno JR, Wang Y-X

To Be Published

Sort by: Download
Showing 1 - 10 of 126. Page 1 of 13
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [126]

Current status

  • REL [126]

Sample type

  • Ligand [122]
  • RNA [109]
  • Complex [86]
  • Protein [45]
  • Cellular component [40]

Organism

  • Geobacillus stearothermophilus [100]
  • Saccharomyces cerevisiae [7]
  • Sus scrofa [6]
  • Caldanaerobacter subterraneus [5]
  • Synthetic construct [3]
  • Severe acute respiratory syndrome coronavirus [2]
  • Mus musculus [1]
  • Bacillus subtilis [1]
  • Geobacillus stearothermophilus [1]
  • Arachis hypogaea [1]
  • Homo sapiens [1]

EM Method

  • Single-particle [126]

Resolution

  • ≥ 2Å and < 3Å [51]
  • ≥ 3Å and < 4Å [72]
  • ≥ 4Å and < 5Å [2]
  • ≥ 5Å and < 6Å [1]

Model molecular weight

  • 0-50 kDa [3]
  • 50-100 kDa [1]
  • 100-250 kDa [99]
  • 250-500 kDa [10]
  • 500-1000 kDa [1]

Release Date

  • 2026 [101]
  • 2025 [8]
  • 2024 [7]
  • 2023 [5]
  • 2022 [1]
  • 2021 [3]
  • 2019 [1]

Author by name

  • Wang YX [95]
  • Degenhardt MFS [82]
  • Stagno J [76]
  • Wang Y-X [48]
  • Stagno JR [32]
  • Lee Y-T [27]
  • Zhang J [25]
  • Bhoge BA [24]
  • Skeparnias I [24]
  • Frazao De Souza Degenhardt M [21]
  • Chen SY [17]
  • Lee YT [17]
  • Dyba MA [14]
  • Tarasov SG [14]
  • Yang GF [12]
  • Cui GR [11]
  • Chen S-Y [10]
  • Li ZW [10]
  • Wu QY [10]
  • Ye Y [10]
  • Zhu XL [10]
  • Deme JC [8]
  • Lea SM [8]
  • Yu P [8]
  • Dong Y [6]
  • Guan ZW [6]
  • Jiang JJ [6]
  • Shi XX [6]
  • Sun JY [6]
  • Wang F [6]
  • Zhang N [6]
  • Ding J [5]
  • Fan ED [4]
  • Fan L [4]
  • Fu YX [4]
  • Huang YH [4]
  • Lu ZW [4]
  • Wang JY [4]
  • Wei G [4]
  • Yu XH [4]
  • Chari R [3]
  • Dwivedi V [3]
  • Lee HK [3]
  • Young HA [3]
  • Cong Y [2]
  • Hong Q [2]
  • Chen M [1]
  • Chiu W [1]
  • Dong JQ [1]
  • Giarimoglou N [1]
  • Han WY [1]
  • Henderson FE [1]
  • Huang Z [1]
  • Lehmann J [1]
  • Li JW [1]
  • Li S [1]
  • Ludtke SJ [1]
  • Pintilie GD [1]
  • Stamatopoulou V [1]
  • Stathopoulos C [1]
  • Su C [1]
  • Su Z [1]
  • Wang YF [1]
  • Xiao JY [1]
  • Xu C [1]
  • Zhang C [1]
  • Zhang K [1]

Author by ORCID

  • Wang YX [77]
  • Stagno J [76]
  • Degenhardt MFS [70]
  • Wang Y-X [22]
  • Frazao De Souza Degenhardt M [21]
  • Stagno JR [20]
  • Zhang J [16]
  • Lee YT [14]
  • Yang GF [10]
  • Zhu XL [6]
  • Wang F [6]
  • Wu QY [6]
  • Deme JC [5]
  • Lea SM [5]
  • Ding J [5]
  • Fu YX [4]
  • Wang YX [4]
  • Ye Y [4]
  • Chari R [3]
  • Bhoge BA [1]
  • Lee Y-T [1]
  • Pintilie GD [1]
  • Ludtke SJ [1]
  • Giarimoglou N [1]
  • Stathopoulos C [1]
  • Chiu W [1]
  • Su Z [1]
  • Lehmann J [1]
  • Zhang K [1]
  • Skeparnias I [1]
  • Chen M [1]

Journal

  • TO BE PUBLISHED [93]
  • NAT COMMUN [18]
  • NUCLEIC ACIDS RES [8]
  • J AM CHEM SOC [6]
  • NAT STRUCT MOL BIOL [1]

Software

  • CRYOSPARC [93]
  • UCSF CHIMERAX [12]
  • RELION [1]

Microscope

  • TFS KRIOS [89]
  • FEI TALOS ARCTICA [26]
  • FEI TITAN KRIOS [11]

Electron Source

  • FIELD EMISSION GUN [126]

Film or detector model

  • FEI FALCON IV 4K X 4K [91]
  • GATAN K3 BIOQUANTUM 6K X 4K [23]
  • TFS FALCON 4I 4K X 4K [4]
  • GATAN K2 QUANTUM 4K X 4K [3]
  • GATAN K3 6K X 4K [3]
  • FEI EAGLE 4K X 4K [1]
  • FEI FALCON III 4K X 4K [1]

External links

  • PDB [116]
  • ChEBI [108]
  • DrugBank [101]
  • ChEMBL [41]
  • AlphaFold DB [37]
  • UniProt [37]
  • PDBe-Kb [16]
  • Pfam [16]
  • Gene Ontology [15]
  • InterPro [15]
  • Complex Portal [6]