Happy Holidays and New year from the EMDB! Please be advised that the EMDB team will be operating at reduced capacity between December 15th - January 12th. With this in mind we would ask that you be prepared for longer reply times through both our helpdesk system and the OneDep deposition system. well done on a productive 2025, wishing you all the best and we will see you in 2026!

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author:"Wang J"

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Current Database

  • EMDB [1074]
  • EMPIAR [9]

Current status

  • REL [1083]

Sample type

  • Complex [888]
  • Protein [857]
  • Ligand [547]
  • RNA [128]
  • Virus [70]
  • Cellular component [57]
  • Cell [43]
  • DNA [35]
  • Sample [28]
  • Tissue [3]
  • Other [1]

Organism

  • Homo sapiens [450]
  • Severe acute respiratory syndrome coronavirus [136]
  • Sus scrofa [75]
  • Mus musculus [52]
  • Arabidopsis thaliana [52]
  • Saccharomyces cerevisiae [40]
  • Synthetic construct [36]
  • Rattus norvegicus [20]
  • Chloroflexus aurantiacus [18]
  • Bos taurus [18]
  • Escherichia coli [17]
  • Escherichia phage lambda [15]
  • Drosophila melanogaster [14]
  • Lama glama [14]
  • Mycobacterium tuberculosis [12]
  • Escherichia coli [12]
  • African swine fever virus [11]
  • Severe acute respiratory syndrome coronavirus [11]
  • Sulfolobus acidocaldarius [10]
  • (no species) [10]
  • Bacillus subtilis [9]
  • Vicugna pacos [9]
  • Toxoplasma gondii [9]
  • Semliki forest virus [8]
  • Streptococcus thermophilus [8]
  • Human herpesvirus 2 [7]
  • Enterobacteria phage t4 [7]
  • Vibrio cholerae [7]
  • Listeria monocytogenes [6]
  • Pseudomonas aeruginosa [6]
  • Vibrio cholerae [6]
  • (no species) [6]
  • Camelus bactrianus [6]
  • Lactococcus lactis subsp. cremoris [5]
  • Dabie bandavirus [5]
  • Pseudomonas aeruginosa [5]
  • Mammalian orthoreovirus [5]
  • Saccharomyces cerevisiae [5]
  • Escherichia phage lambda [4]
  • Streptomyces chartreusis [4]
  • Synechocystis sp. pcc 6803 [4]
  • Planctomycetes bacterium [4]
  • Cryptococcus neoformans [4]
  • Alphainfluenzavirus influenzae [4]
  • Geobacter sulfurreducens [4]
  • Haliotis diversicolor [4]
  • Enterovirus d [4]
  • Cryptococcus neoformans [4]
  • Bombyx mori [4]
  • Mycobacterium tuberculosis [4]
  • Salmonella enterica [4]
  • Oryctolagus cuniculus [4]
  • Synechocystis sp. pcc 6803 [3]
  • Influenza a virus [3]
  • Human immunodeficiency virus 1 [3]
  • Hepatovirus a [3]
  • Lactococcus lactis [3]
  • Bat coronavirus [3]
  • (no species) [3]
  • Zika virus [3]
  • Severe acute respiratory syndrome coronavirus [3]
  • Chikungunya virus [3]
  • Enterovirus a [3]
  • Oryza sativa [3]
  • Hyaloperonospora arabidopsidis [3]
  • Trypanosoma brucei [3]
  • Mus musculoides [3]
  • Zika virus [3]
  • Bacteroides fragilis [3]
  • Escherichia coli [3]
  • Kenya bat coronavirus btky72 [3]
  • Dabie bandavirus [2]
  • Sindbis virus [2]
  • Cypovirus 1 [2]
  • Enterovirus c [2]
  • Pseudomonas phage jbd30 [2]
  • Saccharomyces cerevisiae [2]
  • Pediococcus acidilactici [2]
  • Staphylococcus aureus [2]
  • Aquareovirus c [2]
  • Streptococcus thermophilus [2]
  • Middle east respiratory syndrome-related coronavirus [2]
  • Mycolicibacterium smegmatis [2]
  • Streptomyces avidinii [2]
  • Rhinolophus cornutus [2]
  • (no species) [2]
  • Pseudomonas aeruginosa [2]
  • Erinaceus hedgehog coronavirus hku31 [2]
  • Pangolin coronavirus [2]
  • Amycolatopsis orientalis [2]
  • Physcomitrium patens [2]
  • Aspergillus terreus [2]
  • Marburg marburgvirus [2]
  • Bacteriophage sp. [2]
  • Oryza sativa [2]
  • Triticum aestivum [2]
  • Chloracidobacterium thermophilum [2]
  • Staphylococcus delphini [2]
  • Rhinolophus affinis [2]
  • Oplophorus gracilirostris [2]

EM Method

  • Single-particle [983]
  • Helical reconstruction [47]
  • Subtomogram averaging [39]
  • Tomography [3]
  • Electron Crystallography [2]

Resolution

  • < 2Å [8]
  • ≥ 2Å and < 3Å [292]
  • ≥ 3Å and < 4Å [528]
  • ≥ 4Å and < 5Å [92]
  • ≥ 5Å and < 6Å [25]
  • ≥ 6Å and < 8Å [32]
  • ≥ 8Å and < 12Å [31]
  • ≥ 12Å and < 16Å [7]
  • ≥ 16Å and < 20Å [5]
  • ≥ 20Å and < 30Å [19]
  • ≥ 30Å [32]

Model molecular weight

  • 0-50 kDa [18]
  • 50-100 kDa [31]
  • 100-250 kDa [193]
  • 250-500 kDa [141]
  • 500-1000 kDa [82]
  • 1-2 MDa [26]
  • 2-5 MDa [30]
  • 5-10 MDa [15]
  • > 10 MDa [12]

Release Date

  • 2026 [10]
  • 2025 [318]
  • 2024 [199]
  • 2023 [118]
  • 2022 [160]
  • 2021 [102]
  • 2020 [58]
  • 2019 [30]
  • 2018 [36]
  • 2017 [22]
  • 2016 [9]
  • 2015 [10]
  • 2014 [4]
  • 2013 [4]
  • 2010 [1]
  • 2007 [2]

Author by name

  • Wang J [1081]
  • Zhang Y [188]
  • Zhang L [126]
  • Zhang S [122]
  • Wang Y [120]
  • Li Z [118]
  • Wang X [118]
  • Zhang X [111]
  • Zhou J [93]
  • Hu Y [88]
  • Wang HW [88]
  • Yang F [87]
  • Li Y [84]
  • Jiang Y [81]
  • Rao Z [81]
  • Shi Y [80]
  • Wang P [79]
  • Wang L [78]
  • Xu C [76]
  • Yang Y [76]
  • Chen X [72]
  • Wu M [72]
  • Wu S [72]
  • Zhou R [72]
  • Zhang Z [69]
  • Li X [67]
  • He J [66]
  • He Z [66]
  • Liu Y [66]
  • Yu Y [66]
  • Guo R [65]
  • Han F [65]
  • Hu YQ [65]
  • Letts JA [65]
  • Teng F [65]
  • Tian H [65]
  • Zhou L [65]
  • Liu B [62]
  • Liu J [61]
  • Cao Y [60]
  • Wang S [60]
  • Yang S [59]
  • Xiong X [58]
  • Zhao J [57]
  • Guo RY [56]
  • He ZX [56]
  • Xu CY [56]
  • Shao F [55]
  • Wang C [55]
  • Jian F [54]
  • Yu L [54]
  • Xiao T [53]
  • Zhu L [52]
  • Gao Y [51]
  • Chait BT [50]
  • Liu L [50]
  • Sun Y [50]
  • Chen Q [49]
  • Fernandez-martinez J [49]
  • Gu Q [49]
  • Rout MP [49]
  • Echeverria I [48]
  • Sali A [48]
  • Wang R [47]
  • Liu S [46]
  • Niu X [46]
  • Song W [46]
  • Guo W [45]
  • Liu P [44]
  • Zhang K [44]
  • Zhong X [44]
  • Ma Y [43]
  • Lin J [42]
  • Zhang W [42]
  • Liu Z [40]
  • Wu J [39]
  • Xie XS [39]
  • Xiong Y [39]
  • Ye S [39]
  • Bailey EJ [37]
  • Chai P [37]
  • Chen L [37]
  • Devarkar SC [37]
  • Gao X [37]
  • Ge X [37]
  • Huang X [37]
  • Huang Y [37]
  • Lomakin IB [37]
  • Wei Z [37]
  • Zhang Q [37]
  • Zheng W [37]
  • Zhu C [37]
  • Guddat LW [36]
  • Li D [36]
  • Singh D [36]
  • Suslov S [36]
  • Villa E [36]
  • Zhang J [36]
  • An R [35]
  • Liu F [35]

Author by ORCID

  • Yang F [43]
  • Teng F [41]
  • Zhou R [41]
  • Zhou L [41]
  • Hu Y [41]
  • Wu M [41]
  • Letts JA [41]
  • Zhou J [41]
  • Tian H [41]
  • Yang Y [41]
  • Zhang S [41]
  • He Z [41]
  • Han F [41]
  • Wang J [38]
  • Xiong X [36]
  • Wang HW [30]
  • Echeverria I [28]
  • Guo W [25]
  • Liu J [25]
  • Cao Y [24]
  • Rao Z [24]
  • Wang J [24]
  • Zhang K [23]
  • Jian F [23]
  • Xiong Y [23]
  • Liu N [22]
  • Lin J [21]
  • Bailey EJ [21]
  • Lomakin IB [21]
  • Chai P [21]
  • Wang S [21]
  • Zhang Y [21]
  • Wang X [21]
  • Yang S [21]
  • Guo Q [19]
  • Perneel J [18]
  • Demarco ML [18]
  • Xiang X [18]
  • Chang A [18]
  • Heeman B [18]
  • Yang T [16]
  • Zhang Y [16]
  • Kittredge A [16]
  • Wang J [16]
  • Xu X [15]
  • Wu S [15]
  • Zhang X [15]
  • Shen Y [15]
  • Gao N [15]
  • Liu Y [15]
  • Wang J [14]
  • Zeng J [14]
  • Liu F [14]
  • Miao Y [14]
  • Wang J [13]
  • Guddat LW [13]
  • He J [13]
  • Guo Y [12]
  • Wang J [12]
  • Zhou P [12]
  • Gao Y [12]
  • Ran T [12]
  • Gong H [12]
  • Zhang Z [12]
  • Chen X [12]
  • Habib G [12]
  • Zhou Q [12]
  • Yan R [12]
  • Ju B [12]
  • Wang J [12]
  • Wang X [12]
  • Lok SM [12]
  • Zhang L [12]
  • Yuan H [12]
  • Ma Y [12]
  • Zhao D [11]
  • Carter AP [11]
  • Qu K [11]
  • Ciazynska KA [11]
  • Wang J [11]
  • Briggs JAG [11]
  • Zhang X [10]
  • Gao X [10]
  • Moresco EMY [10]
  • Beutler B [10]
  • Bai XC [10]
  • Lyon S [10]
  • Guo J [10]
  • Fibriansah G [10]
  • Choi JH [10]
  • Ge X [10]
  • Lim XN [9]
  • Wang Y [9]
  • Wang Z [9]
  • Fernandez-martinez J [9]
  • Deng Z [9]
  • Wang J [9]
  • Huang XY [9]
  • Wang J [9]
  • Sun Y [8]

Journal

  • NAT COMMUN [217]
  • CELL [126]
  • NAT STRUCT MOL BIOL [91]
  • PNAS [80]
  • NATURE [78]
  • CELL RES [70]
  • STRUCTURE [32]
  • SCI ADV [30]
  • CELL DISCOV [29]
  • MOL CELL [27]
  • TO BE PUBLISHED [26]
  • SCIENCE [25]
  • NUCLEIC ACIDS RES [21]
  • PLOS PATHOG [20]
  • NATL SCI REV [18]
  • J VIROL [15]
  • NAT MICROBIOL [12]
  • PROTEIN CELL [12]
  • CELL HOST MICROBE [11]
  • COMMUN BIOL [11]
  • LIFE SCI ALLIANCE [10]
  • J MOL BIOL [9]
  • PLOS BIOL [8]
  • BIORXIV [6]
  • CELL REP [6]
  • EMBO J [6]
  • J BIOL CHEM [6]
  • MBIO [6]
  • ANGEW CHEM INT ED ENGL [5]
  • APPL ENVIRON MICROBIOL [5]
  • J MED CHEM [5]
  • ADV SCI [4]
  • BLOOD ADV [4]
  • ELIFE [4]
  • J AM CHEM SOC [4]
  • MOL PLANT [4]
  • NAT PLANTS [4]
  • J PHARMACOL EXP THER [3]
  • JACS AU [3]
  • MICROBIOL SPECTR [3]
  • ACTA PHARMACOL.SIN. [2]
  • CIRCULATION [2]
  • EMERG MICROBES INFECT [2]
  • EXP.MOL.MED. [2]
  • FRONT IMMUNOL [2]
  • ISCIENCE [2]
  • NAT CHEM BIOL [2]
  • VACCINE [2]
  • ACTA CRYSTALLOGR D STRUCT BIOL [1]
  • ADV MATER [1]
  • ADV SCI (WEINH) [1]
  • ADVANCED SCIENCE (WEINHEIM, BADEN-WURTTEMBERG, GERMANY) [1]
  • BBA ADV [1]
  • BIOCHEMISTRY [1]
  • BIOMOLECULES [1]
  • BIOPHYS REP [1]
  • CLIN.CANCER RES. [1]
  • EXP HEMATOL ONCOL [1]
  • J EXP MED [1]
  • J INTEGR PLANT BIOL [1]
  • J.CHEM.INF.MODEL. [1]
  • LIFE METAB [1]
  • NAT METHODS [1]
  • NEURON [1]
  • PLANT CELL PHYSIOL [1]
  • PLOS ONE [1]
  • RNA [1]
  • VIRUSES [1]

Software

  • CRYOSPARC [225]
  • RELION [155]
  • CTFFIND [85]
  • EMAN, EMAN2, MPSA [8]
  • GCTF [6]
  • CHIMERA [5]
  • DYNAMO [5]
  • IMOD [5]
  • CTFFIND3 [4]
  • SPIDER, EMAN2, RELION [3]
  • CHIMERA, NAMD/MDFF [2]
  • CISTEM [2]
  • EMAN [2]
  • EMAN1 [2]
  • EMAN2 [2]
  • EMAN2, RELION [2]
  • SCIPION [2]
  • SITUS [2]
  • SPIDER [2]
  • UCSF CHIMERAX [2]
  • CCP4 PACKAGE [1]
  • CRYO [1]
  • E2BOXER [1]
  • EMAN2, RELION-1.1, XMIPP-2.4 [1]
  • EMCLARITY [1]
  • EMIP, CHIMERA [1]
  • IMAGIC, SPIDER [1]
  • LEGINON [1]
  • MDFF [1]
  • MRC, EMIP, CHIMERA [1]
  • PHENIX [1]
  • PROGRAM O [1]

Microscope

  • FEI TITAN KRIOS [762]
  • TFS KRIOS [130]
  • FEI TALOS ARCTICA [56]
  • FEI TECNAI F30 [47]
  • FEI TITAN [27]
  • FEI TECNAI ARCTICA [12]
  • FEI POLARA 300 [10]
  • FEI TECNAI F20 [7]
  • FEI TECNAI 20 [5]
  • OTHER [4]
  • TFS GLACIOS [4]
  • FEI TECNAI 12 [3]
  • JEOL 3200FSC [3]
  • FEI TECNAI SPIRIT [2]
  • FEI/PHILIPS CM300FEG/HE [1]
  • TFS TALOS [1]

Electron Source

  • FIELD EMISSION GUN [1056]
  • OTHER [10]
  • LAB6 [7]
  • TUNGSTEN HAIRPIN [1]

Film or detector model

  • GATAN K3 6K X 4K [367]
  • GATAN K2 SUMMIT 4K X 4K [233]
  • GATAN K3 BIOQUANTUM 6K X 4K [171]
  • FEI FALCON IV 4K X 4K [150]
  • GATAN K2 QUANTUM 4K X 4K [59]
  • FEI FALCON II 4K X 4K [32]
  • GATAN K3 BIOCONTINUUM 6K X 4K [19]
  • TFS FALCON 4I 4K X 4K [7]
  • DIRECT ELECTRON DE-10 5K X 4K [5]
  • KODAK SO-163 FILM [5]
  • GATAN K2 BASE 4K X 4K [4]
  • GATAN K2 IS 4K X 4K [4]
  • GATAN K2 4K X 4K [3]
  • GATAN ULTRASCAN 4000 4K X 4K [3]
  • FEI CETA 4K X 4K [2]
  • FEI FALCON I 4K X 4K [2]
  • OTHER [2]
  • FEI EAGLE 4K X 4K [1]
  • FEI FALCON III 4K X 4K [1]
  • GENERIC GATAN [1]
  • GENERIC IMAGE PLATES [1]
  • TVIPS TEMCAM-F415 4K X 4K [1]

EMPIAR Experiment type

  • EMDB [9]

EMPIAR Image category

  • MICROGRAPHS - MULTIFRAME [7]
  • MICROGRAPHS - SINGLE FRAME [2]
  • CLASS AVERAGES [1]

External links

  • AlphaFold DB [634]
  • PDB [551]
  • UniProt [548]
  • PDBe-Kb [503]
  • Pfam [470]
  • InterPro [420]
  • Gene Ontology [415]
  • ChEBI [324]
  • ChEMBL [317]
  • DrugBank [238]
  • Complex Portal [163]
  • EMPIAR [11]
  • EMDB [9]
  • SCOP2 [7]
  • CATH [5]
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EMD-53901
Download Map
3D View
Icosahedral reconstruction of Semliki Forest virus in complex with ApoER2 LA5
Release date: Jan. 14, 2026
Resolution: 3.6 Å
EM Method: Single-particle

Du B, Song X, Zhao B, Shi Z, Liu Z, Wang S, Wei L, He X, Huiskonen JT, Yang D, Wang J

Nat Commun (2025) [ Pubmed: 41419770 DOI: doi:10.1038/s41467-025-67550-6 ]

EMD-53902
Download Map
3D View
Semliki Forest virus trimer 1 in complex with ApoER2 LA5
Release date: Jan. 14, 2026
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 9rbq
Q-score: 0.602

Du B, Song X, Zhao B, Shi Z, Liu Z, Wang S, Wei L, He X, Huiskonen JT, Yang D, Wang J

Nat Commun (2025) [ Pubmed: 41419770 DOI: doi:10.1038/s41467-025-67550-6 ]

EMD-53903
Download Map
3D View
Semliki Forest virus trimer 2 in complex with ApoER2 LA5
Release date: Jan. 14, 2026
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 9rbr
Q-score: 0.607

Du B, Song X, Zhao B, Shi Z, Liu Z, Wang S, Wei L, He X, Huiskonen JT, Yang D, Wang J

Nat Commun (2025) [ Pubmed: 41419770 DOI: doi:10.1038/s41467-025-67550-6 ]

EMD-53904
Composite map
Download Map
3D View
Composite density map of Semliki Forest virus in complex with ApoER2 LA5
Release date: Jan. 14, 2026
Resolution: 2.7 Å
EM Method: Single-particle

Du B, Song X, Zhao B, Shi Z, Liu Z, Wang S, Wei L, He X, Huiskonen JT, Yang D, Wang J

Nat Commun (2025) [ Pubmed: 41419770 DOI: doi:10.1038/s41467-025-67550-6 ]

EMD-53905
Download Map
3D View
Icosahedral reconstruction of Semliki Forest virus in complex with ApoER2 ligand-binding domain
Release date: Jan. 14, 2026
Resolution: 4.2 Å
EM Method: Single-particle

Du B, Song X, Zhao B, Shi Z, Liu Z, Wang S, Wei L, He X, Huiskonen JT, Yang D, Wang J

Nat Commun (2025) [ Pubmed: 41419770 DOI: doi:10.1038/s41467-025-67550-6 ]

EMD-53906
Download Map
3D View
Semliki Forest virus trimer 1 in complex with ApoER2 ligand-binding domain
Release date: Jan. 14, 2026
Resolution: 2.8 Å
EM Method: Single-particle

Du B, Song X, Zhao B, Shi Z, Liu Z, Wang S, Wei L, He X, Huiskonen JT, Yang D, Wang J

Nat Commun (2025) [ Pubmed: 41419770 DOI: doi:10.1038/s41467-025-67550-6 ]

EMD-53907
Download Map
3D View
Semliki Forest virus trimer 2 in complex with ApoER2 ligand-binding domain
Release date: Jan. 14, 2026
Resolution: 2.8 Å
EM Method: Single-particle

Du B, Song X, Zhao B, Shi Z, Liu Z, Wang S, Wei L, He X, Huiskonen JT, Yang D, Wang J

Nat Commun (2025) [ Pubmed: 41419770 DOI: doi:10.1038/s41467-025-67550-6 ]

EMD-53908
Composite map
Download Map
3D View
Composite density map of Semliki Forest virus in complex with ApoER2 ligand-binding domain
Release date: Jan. 14, 2026
Resolution: 2.8 Å
EM Method: Single-particle

Du B, Song X, Zhao B, Shi Z, Liu Z, Wang S, Wei L, He X, Huiskonen JT, Yang D, Wang J

Nat Commun (2025) [ Pubmed: 41419770 DOI: doi:10.1038/s41467-025-67550-6 ]

EMD-63979
Download Map
3D View
RABV G binding with CTB011 Fab and CTB012 Fab
Release date: Jan. 7, 2026
Resolution: 3.94 Å
EM Method: Single-particle
Fitted PDBs: 9ua5
Q-score: 0.323

Cao L, Qu J, Zhang C, Chen R, Wang J, Fehlner-Gardiner C, Niezgoda M, Satheshkumar PS, Wang X, Tsao E

Emerg Microbes Infect (2025) 14 pp. 2547724-2547724 [ DOI: doi:10.1080/22221751.2025.2547724 Pubmed: 40827441 ]

EMD-65160
Download Map
3D View
Structure of human alpha-2/delta-1 with crisugabalin
Release date: Jan. 7, 2026
Resolution: 3.01 Å
EM Method: Single-particle
Fitted PDBs: 9vlg
Q-score: 0.396

Chen Z, Gou X, Meng Q, Li H, Li Y, Shi Z, Li X, Wang J

J.Chem.Inf.Model. (2025) [ DOI: doi:10.1021/acs.jcim.5c02583 Pubmed: 41439594 ]

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Filter By

Current Database

  • EMDB [1074]
  • EMPIAR [9]

Current status

  • REL [1083]

Sample type

  • Complex [888]
  • Protein [857]
  • Ligand [547]
  • RNA [128]
  • Virus [70]
  • Cellular component [57]
  • Cell [43]
  • DNA [35]
  • Sample [28]
  • Tissue [3]
  • Other [1]

Organism

  • Homo sapiens [450]
  • Severe acute respiratory syndrome coronavirus [136]
  • Sus scrofa [75]
  • Mus musculus [52]
  • Arabidopsis thaliana [52]
  • Saccharomyces cerevisiae [40]
  • Synthetic construct [36]
  • Rattus norvegicus [20]
  • Chloroflexus aurantiacus [18]
  • Bos taurus [18]
  • Escherichia coli [17]
  • Escherichia phage lambda [15]
  • Drosophila melanogaster [14]
  • Lama glama [14]
  • Mycobacterium tuberculosis [12]
  • Escherichia coli [12]
  • African swine fever virus [11]
  • Severe acute respiratory syndrome coronavirus [11]
  • Sulfolobus acidocaldarius [10]
  • (no species) [10]
  • Bacillus subtilis [9]
  • Vicugna pacos [9]
  • Toxoplasma gondii [9]
  • Semliki forest virus [8]
  • Streptococcus thermophilus [8]
  • Human herpesvirus 2 [7]
  • Enterobacteria phage t4 [7]
  • Vibrio cholerae [7]
  • Listeria monocytogenes [6]
  • Pseudomonas aeruginosa [6]
  • Vibrio cholerae [6]
  • (no species) [6]
  • Camelus bactrianus [6]
  • Lactococcus lactis subsp. cremoris [5]
  • Dabie bandavirus [5]
  • Pseudomonas aeruginosa [5]
  • Mammalian orthoreovirus [5]
  • Saccharomyces cerevisiae [5]
  • Escherichia phage lambda [4]
  • Streptomyces chartreusis [4]
  • Synechocystis sp. pcc 6803 [4]
  • Planctomycetes bacterium [4]
  • Cryptococcus neoformans [4]
  • Alphainfluenzavirus influenzae [4]
  • Geobacter sulfurreducens [4]
  • Haliotis diversicolor [4]
  • Enterovirus d [4]
  • Cryptococcus neoformans [4]
  • Bombyx mori [4]
  • Mycobacterium tuberculosis [4]
  • Salmonella enterica [4]
  • Oryctolagus cuniculus [4]
  • Synechocystis sp. pcc 6803 [3]
  • Influenza a virus [3]
  • Human immunodeficiency virus 1 [3]
  • Hepatovirus a [3]
  • Lactococcus lactis [3]
  • Bat coronavirus [3]
  • (no species) [3]
  • Zika virus [3]
  • Severe acute respiratory syndrome coronavirus [3]
  • Chikungunya virus [3]
  • Enterovirus a [3]
  • Oryza sativa [3]
  • Hyaloperonospora arabidopsidis [3]
  • Trypanosoma brucei [3]
  • Mus musculoides [3]
  • Zika virus [3]
  • Bacteroides fragilis [3]
  • Escherichia coli [3]
  • Kenya bat coronavirus btky72 [3]
  • Dabie bandavirus [2]
  • Sindbis virus [2]
  • Cypovirus 1 [2]
  • Enterovirus c [2]
  • Pseudomonas phage jbd30 [2]
  • Saccharomyces cerevisiae [2]
  • Pediococcus acidilactici [2]
  • Staphylococcus aureus [2]
  • Aquareovirus c [2]
  • Streptococcus thermophilus [2]
  • Middle east respiratory syndrome-related coronavirus [2]
  • Mycolicibacterium smegmatis [2]
  • Streptomyces avidinii [2]
  • Rhinolophus cornutus [2]
  • (no species) [2]
  • Pseudomonas aeruginosa [2]
  • Erinaceus hedgehog coronavirus hku31 [2]
  • Pangolin coronavirus [2]
  • Amycolatopsis orientalis [2]
  • Physcomitrium patens [2]
  • Aspergillus terreus [2]
  • Marburg marburgvirus [2]
  • Bacteriophage sp. [2]
  • Oryza sativa [2]
  • Triticum aestivum [2]
  • Chloracidobacterium thermophilum [2]
  • Staphylococcus delphini [2]
  • Rhinolophus affinis [2]
  • Oplophorus gracilirostris [2]

EM Method

  • Single-particle [983]
  • Helical reconstruction [47]
  • Subtomogram averaging [39]
  • Tomography [3]
  • Electron Crystallography [2]

Resolution

  • < 2Å [8]
  • ≥ 2Å and < 3Å [292]
  • ≥ 3Å and < 4Å [528]
  • ≥ 4Å and < 5Å [92]
  • ≥ 5Å and < 6Å [25]
  • ≥ 6Å and < 8Å [32]
  • ≥ 8Å and < 12Å [31]
  • ≥ 12Å and < 16Å [7]
  • ≥ 16Å and < 20Å [5]
  • ≥ 20Å and < 30Å [19]
  • ≥ 30Å [32]

Model molecular weight

  • 0-50 kDa [18]
  • 50-100 kDa [31]
  • 100-250 kDa [193]
  • 250-500 kDa [141]
  • 500-1000 kDa [82]
  • 1-2 MDa [26]
  • 2-5 MDa [30]
  • 5-10 MDa [15]
  • > 10 MDa [12]

Release Date

  • 2026 [10]
  • 2025 [318]
  • 2024 [199]
  • 2023 [118]
  • 2022 [160]
  • 2021 [102]
  • 2020 [58]
  • 2019 [30]
  • 2018 [36]
  • 2017 [22]
  • 2016 [9]
  • 2015 [10]
  • 2014 [4]
  • 2013 [4]
  • 2010 [1]
  • 2007 [2]

Author by name

  • Wang J [1081]
  • Zhang Y [188]
  • Zhang L [126]
  • Zhang S [122]
  • Wang Y [120]
  • Li Z [118]
  • Wang X [118]
  • Zhang X [111]
  • Zhou J [93]
  • Hu Y [88]
  • Wang HW [88]
  • Yang F [87]
  • Li Y [84]
  • Jiang Y [81]
  • Rao Z [81]
  • Shi Y [80]
  • Wang P [79]
  • Wang L [78]
  • Xu C [76]
  • Yang Y [76]
  • Chen X [72]
  • Wu M [72]
  • Wu S [72]
  • Zhou R [72]
  • Zhang Z [69]
  • Li X [67]
  • He J [66]
  • He Z [66]
  • Liu Y [66]
  • Yu Y [66]
  • Guo R [65]
  • Han F [65]
  • Hu YQ [65]
  • Letts JA [65]
  • Teng F [65]
  • Tian H [65]
  • Zhou L [65]
  • Liu B [62]
  • Liu J [61]
  • Cao Y [60]
  • Wang S [60]
  • Yang S [59]
  • Xiong X [58]
  • Zhao J [57]
  • Guo RY [56]
  • He ZX [56]
  • Xu CY [56]
  • Shao F [55]
  • Wang C [55]
  • Jian F [54]
  • Yu L [54]
  • Xiao T [53]
  • Zhu L [52]
  • Gao Y [51]
  • Chait BT [50]
  • Liu L [50]
  • Sun Y [50]
  • Chen Q [49]
  • Fernandez-martinez J [49]
  • Gu Q [49]
  • Rout MP [49]
  • Echeverria I [48]
  • Sali A [48]
  • Wang R [47]
  • Liu S [46]
  • Niu X [46]
  • Song W [46]
  • Guo W [45]
  • Liu P [44]
  • Zhang K [44]
  • Zhong X [44]
  • Ma Y [43]
  • Lin J [42]
  • Zhang W [42]
  • Liu Z [40]
  • Wu J [39]
  • Xie XS [39]
  • Xiong Y [39]
  • Ye S [39]
  • Bailey EJ [37]
  • Chai P [37]
  • Chen L [37]
  • Devarkar SC [37]
  • Gao X [37]
  • Ge X [37]
  • Huang X [37]
  • Huang Y [37]
  • Lomakin IB [37]
  • Wei Z [37]
  • Zhang Q [37]
  • Zheng W [37]
  • Zhu C [37]
  • Guddat LW [36]
  • Li D [36]
  • Singh D [36]
  • Suslov S [36]
  • Villa E [36]
  • Zhang J [36]
  • An R [35]
  • Liu F [35]

Author by ORCID

  • Yang F [43]
  • Teng F [41]
  • Zhou R [41]
  • Zhou L [41]
  • Hu Y [41]
  • Wu M [41]
  • Letts JA [41]
  • Zhou J [41]
  • Tian H [41]
  • Yang Y [41]
  • Zhang S [41]
  • He Z [41]
  • Han F [41]
  • Wang J [38]
  • Xiong X [36]
  • Wang HW [30]
  • Echeverria I [28]
  • Guo W [25]
  • Liu J [25]
  • Cao Y [24]
  • Rao Z [24]
  • Wang J [24]
  • Zhang K [23]
  • Jian F [23]
  • Xiong Y [23]
  • Liu N [22]
  • Lin J [21]
  • Bailey EJ [21]
  • Lomakin IB [21]
  • Chai P [21]
  • Wang S [21]
  • Zhang Y [21]
  • Wang X [21]
  • Yang S [21]
  • Guo Q [19]
  • Perneel J [18]
  • Demarco ML [18]
  • Xiang X [18]
  • Chang A [18]
  • Heeman B [18]
  • Yang T [16]
  • Zhang Y [16]
  • Kittredge A [16]
  • Wang J [16]
  • Xu X [15]
  • Wu S [15]
  • Zhang X [15]
  • Shen Y [15]
  • Gao N [15]
  • Liu Y [15]
  • Wang J [14]
  • Zeng J [14]
  • Liu F [14]
  • Miao Y [14]
  • Wang J [13]
  • Guddat LW [13]
  • He J [13]
  • Guo Y [12]
  • Wang J [12]
  • Zhou P [12]
  • Gao Y [12]
  • Ran T [12]
  • Gong H [12]
  • Zhang Z [12]
  • Chen X [12]
  • Habib G [12]
  • Zhou Q [12]
  • Yan R [12]
  • Ju B [12]
  • Wang J [12]
  • Wang X [12]
  • Lok SM [12]
  • Zhang L [12]
  • Yuan H [12]
  • Ma Y [12]
  • Zhao D [11]
  • Carter AP [11]
  • Qu K [11]
  • Ciazynska KA [11]
  • Wang J [11]
  • Briggs JAG [11]
  • Zhang X [10]
  • Gao X [10]
  • Moresco EMY [10]
  • Beutler B [10]
  • Bai XC [10]
  • Lyon S [10]
  • Guo J [10]
  • Fibriansah G [10]
  • Choi JH [10]
  • Ge X [10]
  • Lim XN [9]
  • Wang Y [9]
  • Wang Z [9]
  • Fernandez-martinez J [9]
  • Deng Z [9]
  • Wang J [9]
  • Huang XY [9]
  • Wang J [9]
  • Sun Y [8]

Journal

  • NAT COMMUN [217]
  • CELL [126]
  • NAT STRUCT MOL BIOL [91]
  • PNAS [80]
  • NATURE [78]
  • CELL RES [70]
  • STRUCTURE [32]
  • SCI ADV [30]
  • CELL DISCOV [29]
  • MOL CELL [27]
  • TO BE PUBLISHED [26]
  • SCIENCE [25]
  • NUCLEIC ACIDS RES [21]
  • PLOS PATHOG [20]
  • NATL SCI REV [18]
  • J VIROL [15]
  • NAT MICROBIOL [12]
  • PROTEIN CELL [12]
  • CELL HOST MICROBE [11]
  • COMMUN BIOL [11]
  • LIFE SCI ALLIANCE [10]
  • J MOL BIOL [9]
  • PLOS BIOL [8]
  • BIORXIV [6]
  • CELL REP [6]
  • EMBO J [6]
  • J BIOL CHEM [6]
  • MBIO [6]
  • ANGEW CHEM INT ED ENGL [5]
  • APPL ENVIRON MICROBIOL [5]
  • J MED CHEM [5]
  • ADV SCI [4]
  • BLOOD ADV [4]
  • ELIFE [4]
  • J AM CHEM SOC [4]
  • MOL PLANT [4]
  • NAT PLANTS [4]
  • J PHARMACOL EXP THER [3]
  • JACS AU [3]
  • MICROBIOL SPECTR [3]
  • ACTA PHARMACOL.SIN. [2]
  • CIRCULATION [2]
  • EMERG MICROBES INFECT [2]
  • EXP.MOL.MED. [2]
  • FRONT IMMUNOL [2]
  • ISCIENCE [2]
  • NAT CHEM BIOL [2]
  • VACCINE [2]
  • ACTA CRYSTALLOGR D STRUCT BIOL [1]
  • ADV MATER [1]
  • ADV SCI (WEINH) [1]
  • ADVANCED SCIENCE (WEINHEIM, BADEN-WURTTEMBERG, GERMANY) [1]
  • BBA ADV [1]
  • BIOCHEMISTRY [1]
  • BIOMOLECULES [1]
  • BIOPHYS REP [1]
  • CLIN.CANCER RES. [1]
  • EXP HEMATOL ONCOL [1]
  • J EXP MED [1]
  • J INTEGR PLANT BIOL [1]
  • J.CHEM.INF.MODEL. [1]
  • LIFE METAB [1]
  • NAT METHODS [1]
  • NEURON [1]
  • PLANT CELL PHYSIOL [1]
  • PLOS ONE [1]
  • RNA [1]
  • VIRUSES [1]

Software

  • CRYOSPARC [225]
  • RELION [155]
  • CTFFIND [85]
  • EMAN, EMAN2, MPSA [8]
  • GCTF [6]
  • CHIMERA [5]
  • DYNAMO [5]
  • IMOD [5]
  • CTFFIND3 [4]
  • SPIDER, EMAN2, RELION [3]
  • CHIMERA, NAMD/MDFF [2]
  • CISTEM [2]
  • EMAN [2]
  • EMAN1 [2]
  • EMAN2 [2]
  • EMAN2, RELION [2]
  • SCIPION [2]
  • SITUS [2]
  • SPIDER [2]
  • UCSF CHIMERAX [2]
  • CCP4 PACKAGE [1]
  • CRYO [1]
  • E2BOXER [1]
  • EMAN2, RELION-1.1, XMIPP-2.4 [1]
  • EMCLARITY [1]
  • EMIP, CHIMERA [1]
  • IMAGIC, SPIDER [1]
  • LEGINON [1]
  • MDFF [1]
  • MRC, EMIP, CHIMERA [1]
  • PHENIX [1]
  • PROGRAM O [1]

Microscope

  • FEI TITAN KRIOS [762]
  • TFS KRIOS [130]
  • FEI TALOS ARCTICA [56]
  • FEI TECNAI F30 [47]
  • FEI TITAN [27]
  • FEI TECNAI ARCTICA [12]
  • FEI POLARA 300 [10]
  • FEI TECNAI F20 [7]
  • FEI TECNAI 20 [5]
  • OTHER [4]
  • TFS GLACIOS [4]
  • FEI TECNAI 12 [3]
  • JEOL 3200FSC [3]
  • FEI TECNAI SPIRIT [2]
  • FEI/PHILIPS CM300FEG/HE [1]
  • TFS TALOS [1]

Electron Source

  • FIELD EMISSION GUN [1056]
  • OTHER [10]
  • LAB6 [7]
  • TUNGSTEN HAIRPIN [1]

Film or detector model

  • GATAN K3 6K X 4K [367]
  • GATAN K2 SUMMIT 4K X 4K [233]
  • GATAN K3 BIOQUANTUM 6K X 4K [171]
  • FEI FALCON IV 4K X 4K [150]
  • GATAN K2 QUANTUM 4K X 4K [59]
  • FEI FALCON II 4K X 4K [32]
  • GATAN K3 BIOCONTINUUM 6K X 4K [19]
  • TFS FALCON 4I 4K X 4K [7]
  • DIRECT ELECTRON DE-10 5K X 4K [5]
  • KODAK SO-163 FILM [5]
  • GATAN K2 BASE 4K X 4K [4]
  • GATAN K2 IS 4K X 4K [4]
  • GATAN K2 4K X 4K [3]
  • GATAN ULTRASCAN 4000 4K X 4K [3]
  • FEI CETA 4K X 4K [2]
  • FEI FALCON I 4K X 4K [2]
  • OTHER [2]
  • FEI EAGLE 4K X 4K [1]
  • FEI FALCON III 4K X 4K [1]
  • GENERIC GATAN [1]
  • GENERIC IMAGE PLATES [1]
  • TVIPS TEMCAM-F415 4K X 4K [1]

EMPIAR Experiment type

  • EMDB [9]

EMPIAR Image category

  • MICROGRAPHS - MULTIFRAME [7]
  • MICROGRAPHS - SINGLE FRAME [2]
  • CLASS AVERAGES [1]

External links

  • AlphaFold DB [634]
  • PDB [551]
  • UniProt [548]
  • PDBe-Kb [503]
  • Pfam [470]
  • InterPro [420]
  • Gene Ontology [415]
  • ChEBI [324]
  • ChEMBL [317]
  • DrugBank [238]
  • Complex Portal [163]
  • EMPIAR [11]
  • EMDB [9]
  • SCOP2 [7]
  • CATH [5]