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author:"Truong VH"

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Current Database

  • EMDB [10]

Current status

  • REL [10]

Sample type

  • Complex [10]
  • DNA [6]
  • Protein [6]
  • RNA [4]
  • Ligand [3]

Organism

  • Synthetic construct [4]
  • Vibrio cholerae [4]
  • Escherichia coli [3]
  • [scytonema hofmanni] utex b 1581 [2]
  • Scytonema hofmannii [2]
  • Aeromonas salmonicida [2]
  • Vibrio cholerae [1]

EM Method

  • Single-particle [10]

Resolution

  • ≥ 3Å and < 4Å [8]
  • ≥ 4Å and < 5Å [2]

Model molecular weight

  • 250-500 kDa [1]
  • 500-1000 kDa [2]
  • 1-2 MDa [2]

Release Date

  • 2026 [5]
  • 2023 [2]
  • 2022 [3]

Author by name

  • Truong VH [10]
  • Kellogg EH [9]
  • Fatma S [5]
  • Miller DJ [5]
  • Ahsan M [4]
  • Palermo G [4]
  • Park JU [4]
  • Pindi C [4]
  • Sheng Y [4]
  • Rizo AN [3]
  • Schargel RD [3]
  • Wellner TX [3]
  • Budhathoki J [2]
  • Hsieh SC [2]
  • Ke A [2]
  • Mehrotra E [2]
  • Park J-U [2]
  • Petassi MT [2]
  • Peters JE [2]
  • Schuler G [2]
  • Thyme SB [2]
  • Tsai AW [2]
  • Kellogg EHK [1]
  • Kellogg EK [1]
  • Park J [1]
  • Rizo AR [1]
  • Tsai AWT [1]

Author by ORCID

  • Wellner TX [3]
  • Kellogg EH [3]
  • Peters JE [2]
  • Tsai AW [2]
  • Hsieh SC [2]
  • Tsai AWT [1]
  • Park J [1]
  • Miller DJ [1]
  • Truong VH [1]

Journal

  • SCI ADV [4]
  • NATURE [3]
  • MOL CELL [2]
  • TO BE PUBLISHED [1]

Software

  • CRYOSPARC [8]
  • RELION [3]

Microscope

  • FEI TALOS ARCTICA [6]
  • FEI TITAN KRIOS [3]
  • TFS KRIOS [1]

Electron Source

  • FIELD EMISSION GUN [10]

Film or detector model

  • GATAN K3 BIOQUANTUM 6K X 4K [8]
  • GATAN K3 6K X 4K [2]

External links

  • AlphaFold DB [5]
  • Gene Ontology [5]
  • InterPro [5]
  • PDB [5]
  • PDBe-Kb [5]
  • UniProt [5]
  • ChEBI [3]
  • ChEMBL [3]
  • DrugBank [3]
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Showing 1 - 10 of 10. Page 1 of 1
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EMD-72640
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3D View
Consensus map of the IF-3a transposase complex with synaptic ends
CryoEM
Consensus map
Release date: Sept. 2, 2026
Resolution: 3.9 Å
EM Method: Single-particle

Truong VH, Miller DJ, Fatma S, Sheng Y, Pindi C, Ahsan M, Palermo G, Kellogg EH

Sci Adv (2026) 12 pp. eaee1374-eaee1374 [ Pubmed: 42826193 DOI: doi:10.1126/sciadv.aee1374 ]

EMD-72641
Download Map
3D View
Focused refinement map of IHF region of IF3-a transposase complex with synapsed ends
CryoEM
Focused map
Release date: Sept. 2, 2026
Resolution: 4.18 Å
EM Method: Single-particle

Truong VH, Miller DJ, Fatma S, Sheng Y, Pindi C, Ahsan M, Palermo G, Kellogg EH

Sci Adv (2026) 12 pp. eaee1374-eaee1374 [ Pubmed: 42826193 DOI: doi:10.1126/sciadv.aee1374 ]

EMD-72647
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3D View
Focused refinement map of distal right end DNA region within IF3A transposase complex with synapsed ends
CryoEM
Focused map
Release date: Sept. 2, 2026
Resolution: 3.94 Å
EM Method: Single-particle

Truong VH, Miller DJ, Fatma S, Sheng Y, Pindi C, Ahsan M, Palermo G, Kellogg EH

Sci Adv (2026) 12 pp. eaee1374-eaee1374 [ Pubmed: 42826193 DOI: doi:10.1126/sciadv.aee1374 ]

EMD-72648
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3D View
Focused refinement of core region of 1F3A transposase complex with synapsed ends
Focused map
CryoEM
Release date: Sept. 2, 2026
Resolution: 3.48 Å
EM Method: Single-particle

Miller DJ, Truong VH

To Be Published

EMD-72650
Download Map
3D View
Composite map of IF-3a transposase complex with paired transposon ends
Composite map
CryoEM
Release date: Sept. 2, 2026
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 9y7b
Q-score: 0.293
Similar entry percentile: 18%

Truong VH, Miller DJ, Fatma S, Sheng Y, Pindi C, Ahsan M, Palermo G, Kellogg EH

Sci Adv (2026) 12 pp. eaee1374-eaee1374 [ Pubmed: 42826193 DOI: doi:10.1126/sciadv.aee1374 ]

EMD-26348
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3D View
I-F3b Cascade-TniQ full R-loop complex
CryoEM
Release date: June 21, 2023
Resolution: 3.52 Å
EM Method: Single-particle
Fitted PDBs: 7u5d

Park JU, Petassi MT, Hsieh SC, Mehrotra E, Schuler G, Budhathoki J, Truong VH, Thyme SB, Ke A, Kellogg EH, Peters JE

Mol Cell (2023) 83 pp. 1827-1838.e6 [ Pubmed: 37267904 DOI: doi:10.1016/j.molcel.2023.05.005 ]

EMD-26349
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3D View
I-F3b Cascade-TniQ full R-loop complex
CryoEM
Release date: June 14, 2023
Resolution: 4.03 Å
EM Method: Single-particle
Fitted PDBs: 7u5e

Park JU, Petassi MT, Hsieh SC, Mehrotra E, Schuler G, Budhathoki J, Truong VH, Thyme SB, Ke A, Kellogg EH, Peters JE

Mol Cell (2023) 83 pp. 1827-1838.e6 [ Pubmed: 37267904 DOI: doi:10.1016/j.molcel.2023.05.005 ]

EMD-27971
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3D View
V-K CAST Transpososome from Scytonema hofmanni, major configuration
CryoEM
Release date: Nov. 30, 2022
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 8ea3

Park JU, Tsai AW, Rizo AN, Truong VH, Wellner TX, Schargel RD, Kellogg EH

Nature (2023) 613 pp. 775-782 [ DOI: doi:10.1038/s41586-022-05573-5 Pubmed: 36442503 ]

EMD-27972
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3D View
V-K CAST Transpososome from Scytonema hofmanni, minor configuration
CryoEM
Release date: Nov. 30, 2022
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 8ea4

Park JU, Tsai AW, Rizo AN, Truong VH, Wellner TX, Schargel RD, Kellogg EH

Nature (2023) 613 pp. 775-782 [ DOI: doi:10.1038/s41586-022-05573-5 Pubmed: 36442503 ]

EMD-25453
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3D View
TnsBctd-TnsC-TniQ complex
CryoEM
Release date: Nov. 23, 2022
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7svu

Park J, Tsai AWT, Rizo AN, Truong VH, Wellner TX, Schargel RD, Kellogg EH

Nature (2023) 613 pp. 775-782 [ DOI: doi:10.1038/s41586-022-05573-5 Pubmed: 36442503 ]

Sort by: Download
Showing 1 - 10 of 10. Page 1 of 1
Display:
Statistics
×

Download


Preview 10 entries View All Download file

Filter By

Current Database

  • EMDB [10]

Current status

  • REL [10]

Sample type

  • Complex [10]
  • DNA [6]
  • Protein [6]
  • RNA [4]
  • Ligand [3]

Organism

  • Synthetic construct [4]
  • Vibrio cholerae [4]
  • Escherichia coli [3]
  • [scytonema hofmanni] utex b 1581 [2]
  • Scytonema hofmannii [2]
  • Aeromonas salmonicida [2]
  • Vibrio cholerae [1]

EM Method

  • Single-particle [10]

Resolution

  • ≥ 3Å and < 4Å [8]
  • ≥ 4Å and < 5Å [2]

Model molecular weight

  • 250-500 kDa [1]
  • 500-1000 kDa [2]
  • 1-2 MDa [2]

Release Date

  • 2026 [5]
  • 2023 [2]
  • 2022 [3]

Author by name

  • Truong VH [10]
  • Kellogg EH [9]
  • Fatma S [5]
  • Miller DJ [5]
  • Ahsan M [4]
  • Palermo G [4]
  • Park JU [4]
  • Pindi C [4]
  • Sheng Y [4]
  • Rizo AN [3]
  • Schargel RD [3]
  • Wellner TX [3]
  • Budhathoki J [2]
  • Hsieh SC [2]
  • Ke A [2]
  • Mehrotra E [2]
  • Park J-U [2]
  • Petassi MT [2]
  • Peters JE [2]
  • Schuler G [2]
  • Thyme SB [2]
  • Tsai AW [2]
  • Kellogg EHK [1]
  • Kellogg EK [1]
  • Park J [1]
  • Rizo AR [1]
  • Tsai AWT [1]

Author by ORCID

  • Wellner TX [3]
  • Kellogg EH [3]
  • Peters JE [2]
  • Tsai AW [2]
  • Hsieh SC [2]
  • Tsai AWT [1]
  • Park J [1]
  • Miller DJ [1]
  • Truong VH [1]

Journal

  • SCI ADV [4]
  • NATURE [3]
  • MOL CELL [2]
  • TO BE PUBLISHED [1]

Software

  • CRYOSPARC [8]
  • RELION [3]

Microscope

  • FEI TALOS ARCTICA [6]
  • FEI TITAN KRIOS [3]
  • TFS KRIOS [1]

Electron Source

  • FIELD EMISSION GUN [10]

Film or detector model

  • GATAN K3 BIOQUANTUM 6K X 4K [8]
  • GATAN K3 6K X 4K [2]

External links

  • AlphaFold DB [5]
  • Gene Ontology [5]
  • InterPro [5]
  • PDB [5]
  • PDBe-Kb [5]
  • UniProt [5]
  • ChEBI [3]
  • ChEMBL [3]
  • DrugBank [3]