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author:"Schilbach S"

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Current Database

  • EMDB [48]

Current status

  • REL [48]

Sample type

  • Complex [48]
  • Ligand [33]
  • Protein [33]
  • DNA [32]

Organism

  • Homo sapiens [23]
  • Saccharomyces cerevisiae [15]
  • Sus scrofa [15]
  • Synthetic construct [13]
  • Human mastadenovirus c [9]
  • Saccharomyces cerevisiae [6]
  • Xenopus laevis [4]
  • Unidentified adenovirus [1]
  • Saccharomyces cerevisiae [1]
  • Saccharomyces killer virus m2-4 [1]
  • Trichoplusia ni [1]
  • Sus scrofa [1]

EM Method

  • Single-particle [48]

Resolution

  • ≥ 2Å and < 3Å [15]
  • ≥ 3Å and < 4Å [17]
  • ≥ 4Å and < 5Å [8]
  • ≥ 5Å and < 6Å [2]
  • ≥ 6Å and < 8Å [5]
  • ≥ 8Å and < 12Å [1]

Model molecular weight

  • 250-500 kDa [3]
  • 500-1000 kDa [8]
  • 1-2 MDa [21]
  • 2-5 MDa [1]

Release Date

  • 2023 [2]
  • 2022 [8]
  • 2021 [33]
  • 2018 [5]

Author by name

  • Cramer P [48]
  • Schilbach S [48]
  • Aibara S [33]
  • Dienemann C [24]
  • Grabbe F [10]
  • Urlaub H [10]
  • Rengachari S [7]
  • Gouge J [5]
  • Kaliyappan T [5]
  • Schwarz J [5]
  • Vannini A [5]
  • Wang H [5]
  • Zumer K [5]
  • Ninov M [3]
  • Schwalb B [3]
  • Hantsche M [2]
  • Tegunov D [2]
  • Wigge C [2]
  • Fianu I [1]

Author by ORCID

  • Schilbach S [48]
  • Cramer P [31]
  • Aibara S [23]
  • Dienemann C [13]
  • Vannini A [5]
  • Urlaub H [5]
  • Wang H [5]
  • Zumer K [5]
  • Schwalb B [3]
  • Tegunov D [2]
  • Hantsche M [2]
  • Fianu I [1]
  • Rengachari S [1]

Journal

  • NATURE [24]
  • CELL [10]
  • NAT STRUCT MOL BIOL [8]
  • BIORXIV [4]
  • MOL CELL [3]
  • PNAS [2]
  • COMMUN BIOL [1]

Software

  • RELION [13]
  • WARP [4]

Microscope

  • FEI TITAN KRIOS [42]
  • TFS KRIOS [5]
  • FEI TITAN [1]

Electron Source

  • FIELD EMISSION GUN [48]

Film or detector model

  • GATAN K3 BIOQUANTUM 6K X 4K [32]
  • GATAN K2 SUMMIT 4K X 4K [12]
  • GATAN K2 QUANTUM 4K X 4K [3]
  • GATAN K3 6K X 4K [1]

External links

  • PDB [48]
  • AlphaFold DB [33]
  • ChEBI [33]
  • ChEMBL [33]
  • DrugBank [33]
  • Gene Ontology [33]
  • InterPro [33]
  • PDBe-Kb [33]
  • Pfam [33]
  • UniProt [33]
  • Complex Portal [14]
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Showing 1 - 10 of 48. Page 1 of 5
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EMD-16610
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3D View
Yeast RNA polymerase II transcription pre-initiation complex with core Mediator
CryoEM
Release date: March 22, 2023
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 8cen
Q-score: 0.269

Schilbach S, Wang H, Dienemann C, Cramer P

PNAS (2023) 120 pp. e2220542120-e2220542120 [ Pubmed: 37014863 DOI: doi:10.1073/pnas.2220542120 ]

EMD-16611
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3D View
Yeast RNA polymerase II transcription pre-initiation complex with core Mediator and the 1 nucleosome
CryoEM
Release date: March 8, 2023
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 8ceo
Q-score: 0.222

Schilbach S, Wang H, Dienemann C, Cramer P

PNAS (2023) 120 pp. e2220542120-e2220542120 [ Pubmed: 37014863 DOI: doi:10.1073/pnas.2220542120 ]

EMD-15007
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3D View
Structure of SNAPc containing Pol II pre-initiation complex bound to U1 snRNA promoter OC
CryoEM
Release date: Dec. 7, 2022
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 7zx8
Q-score: 0.356

Rengachari S, Schilbach S, Kaliyappan T, Gouge J, Zumer K, Schwarz J, Urlaub H, Dienemann C, Vannini A, Cramer P

Nat Struct Mol Biol (2022) 29 pp. 1159-1169 [ DOI: doi:10.1038/s41594-022-00857-w Pubmed: 36424526 ]

EMD-14996
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3D View
Structure of SNAPc:TBP-TFIIA-TFIIB sub-complex bound to U5 snRNA promoter
CryoEM
Release date: Nov. 30, 2022
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 7zwc
Q-score: 0.452

Rengachari S, Schilbach S, Kaliyappan T, Gouge J, Zumer K, Schwarz J, Urlaub H, Dienemann C, Vannini A, Cramer P

Nat Struct Mol Biol (2022) 29 pp. 1159-1169 [ DOI: doi:10.1038/s41594-022-00857-w Pubmed: 36424526 ]

EMD-14997
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3D View
Structure of SNAPc containing Pol II pre-initiation complex bound to U5 snRNA promoter CC
CryoEM
Release date: Nov. 30, 2022
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 7zwd
Q-score: 0.342

Rengachari S, Schilbach S, Kaliyappan T, Gouge J, Zumer K, Schwarz J, Urlaub H, Dienemann C, Vannini A, Cramer P

Nat Struct Mol Biol (2022) 29 pp. 1159-1169 [ DOI: doi:10.1038/s41594-022-00857-w Pubmed: 36424526 ]

EMD-15006
Download Map
3D View
Structure of SNAPc containing Pol II pre-initiation complex bound to U1 snRNA promoter CC
CryoEM
Release date: Nov. 30, 2022
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 7zx7
Q-score: 0.267

Rengachari S, Schilbach S, Kaliyappan T, Gouge J, Zumer K, Schwarz J, Urlaub H, Dienemann C, Vannini A, Cramer P

Nat Struct Mol Biol (2022) 29 pp. 1159-1169 [ DOI: doi:10.1038/s41594-022-00857-w Pubmed: 36424526 ]

EMD-15009
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3D View
Structure of SNAPc containing Pol II pre-initiation complex bound to U1 snRNA promoter OC
CryoEM
Release date: Nov. 30, 2022
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7zxe
Q-score: 0.333

Rengachari S, Schilbach S, Kaliyappan T, Gouge J, Zumer K, Schwarz J, Urlaub H, Dienemann C, Vannini A, Cramer P

Nat Struct Mol Biol (2022) 29 pp. 1159-1169 [ DOI: doi:10.1038/s41594-022-00857-w Pubmed: 36424526 ]

EMD-14927
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3D View
Yeast RNA polymerase II transcription pre-initiation complex with the 1 nucleosome complex A
CryoEM
Release date: Nov. 16, 2022
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7zs9
Q-score: 0.34

Wang H, Schilbach S, Ninov M, Urlaub H, Cramer P

Nat Struct Mol Biol (2023) 30 pp. 226-232 [ Pubmed: 36411341 DOI: doi:10.1038/s41594-022-00865-w ]

EMD-14928
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Yeast RNA polymerase II transcription pre-initiation complex with the 1 nucleosome and NTP complex B
CryoEM
Release date: Nov. 16, 2022
Resolution: 4.0 Å
EM Method: Single-particle
Fitted PDBs: 7zsa
Q-score: 0.342

Wang H, Schilbach S, Ninov M, Urlaub H, Cramer P

Nat Struct Mol Biol (2023) 30 pp. 226-232 [ Pubmed: 36411341 DOI: doi:10.1038/s41594-022-00865-w ]

EMD-14929
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3D View
Yeast RNA polymerase II transcription pre-initiation complex with the 1 nucleosome and NTP, complex C
CryoEM
Release date: Nov. 16, 2022
Resolution: 6.6 Å
EM Method: Single-particle
Fitted PDBs: 7zsb
Q-score: 0.277

Wang H, Schilbach S, Ninov M, Urlaub H, Cramer P

Nat Struct Mol Biol (2023) 30 pp. 226-232 [ Pubmed: 36411341 DOI: doi:10.1038/s41594-022-00865-w ]

Sort by: Download
Showing 1 - 10 of 48. Page 1 of 5
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [48]

Current status

  • REL [48]

Sample type

  • Complex [48]
  • Ligand [33]
  • Protein [33]
  • DNA [32]

Organism

  • Homo sapiens [23]
  • Saccharomyces cerevisiae [15]
  • Sus scrofa [15]
  • Synthetic construct [13]
  • Human mastadenovirus c [9]
  • Saccharomyces cerevisiae [6]
  • Xenopus laevis [4]
  • Unidentified adenovirus [1]
  • Saccharomyces cerevisiae [1]
  • Saccharomyces killer virus m2-4 [1]
  • Trichoplusia ni [1]
  • Sus scrofa [1]

EM Method

  • Single-particle [48]

Resolution

  • ≥ 2Å and < 3Å [15]
  • ≥ 3Å and < 4Å [17]
  • ≥ 4Å and < 5Å [8]
  • ≥ 5Å and < 6Å [2]
  • ≥ 6Å and < 8Å [5]
  • ≥ 8Å and < 12Å [1]

Model molecular weight

  • 250-500 kDa [3]
  • 500-1000 kDa [8]
  • 1-2 MDa [21]
  • 2-5 MDa [1]

Release Date

  • 2023 [2]
  • 2022 [8]
  • 2021 [33]
  • 2018 [5]

Author by name

  • Cramer P [48]
  • Schilbach S [48]
  • Aibara S [33]
  • Dienemann C [24]
  • Grabbe F [10]
  • Urlaub H [10]
  • Rengachari S [7]
  • Gouge J [5]
  • Kaliyappan T [5]
  • Schwarz J [5]
  • Vannini A [5]
  • Wang H [5]
  • Zumer K [5]
  • Ninov M [3]
  • Schwalb B [3]
  • Hantsche M [2]
  • Tegunov D [2]
  • Wigge C [2]
  • Fianu I [1]

Author by ORCID

  • Schilbach S [48]
  • Cramer P [31]
  • Aibara S [23]
  • Dienemann C [13]
  • Vannini A [5]
  • Urlaub H [5]
  • Wang H [5]
  • Zumer K [5]
  • Schwalb B [3]
  • Tegunov D [2]
  • Hantsche M [2]
  • Fianu I [1]
  • Rengachari S [1]

Journal

  • NATURE [24]
  • CELL [10]
  • NAT STRUCT MOL BIOL [8]
  • BIORXIV [4]
  • MOL CELL [3]
  • PNAS [2]
  • COMMUN BIOL [1]

Software

  • RELION [13]
  • WARP [4]

Microscope

  • FEI TITAN KRIOS [42]
  • TFS KRIOS [5]
  • FEI TITAN [1]

Electron Source

  • FIELD EMISSION GUN [48]

Film or detector model

  • GATAN K3 BIOQUANTUM 6K X 4K [32]
  • GATAN K2 SUMMIT 4K X 4K [12]
  • GATAN K2 QUANTUM 4K X 4K [3]
  • GATAN K3 6K X 4K [1]

External links

  • PDB [48]
  • AlphaFold DB [33]
  • ChEBI [33]
  • ChEMBL [33]
  • DrugBank [33]
  • Gene Ontology [33]
  • InterPro [33]
  • PDBe-Kb [33]
  • Pfam [33]
  • UniProt [33]
  • Complex Portal [14]