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author:"Qiu B"

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Current Database

  • EMDB [77]

Current status

  • REL [77]

Sample type

  • Complex [48]
  • Protein [41]
  • Ligand [25]
  • Cell [17]
  • Cellular component [12]

Organism

  • Mus musculus [36]
  • Homo sapiens [28]
  • Pyrococcus horikoshii [13]

EM Method

  • Single-particle [52]
  • Subtomogram averaging [15]
  • Tomography [10]

Resolution

  • ≥ 2Å and < 3Å [25]
  • ≥ 3Å and < 4Å [27]
  • ≥ 6Å and < 8Å [1]
  • ≥ 8Å and < 12Å [4]
  • ≥ 12Å and < 16Å [2]
  • ≥ 16Å and < 20Å [1]
  • ≥ 20Å and < 30Å [7]

Model molecular weight

  • 0-50 kDa [7]
  • 50-100 kDa [11]
  • 100-250 kDa [9]
  • 250-500 kDa [1]
  • 500-1000 kDa [1]

Release Date

  • 2026 [2]
  • 2025 [27]
  • 2024 [19]
  • 2023 [22]
  • 2021 [7]

Author by name

  • Qiu B [77]
  • Boudker O [41]
  • Zhu X [36]
  • Cong Y [19]
  • Fang C [19]
  • Feng Y [19]
  • Hong Q [19]
  • Li J [19]
  • Lin C [19]
  • Luo J [19]
  • Ma R [19]
  • Meng X [19]
  • Pan C [19]
  • Shi X [19]
  • Tong Y [19]
  • Xu C [19]
  • Yan X [19]
  • Du W [17]
  • Gui M [17]
  • Guo Q [17]
  • Li L [17]
  • Li Z [17]
  • Liu Q [17]
  • Luo S [17]
  • Ma S [17]
  • Bracken C [13]
  • Eliezer D [13]
  • Huang Y [13]
  • Reddy KD [13]
  • Zhan W [13]
  • Cong X [8]
  • Yao C [8]
  • Fortea E [7]
  • Matthies D [7]
  • Yu Z [7]
  • Chakraborty AA [5]
  • Coker JA [5]
  • Earsley A [5]
  • Goins CM [5]
  • Koochaki P [5]
  • Romigh T [5]
  • Stauffer SR [5]
  • Wang NS [5]
  • Bauer JA [2]
  • Days E [2]
  • Mi D [2]
  • Salem C [2]
  • Du M [1]

Author by ORCID

  • Zhu X [36]
  • Qiu B [31]
  • Yan X [19]
  • Cong Y [19]
  • Hong Q [19]
  • Meng X [19]
  • Luo J [19]
  • Fang C [19]
  • Liu Q [17]
  • Gui M [17]
  • Ma S [17]
  • Guo Q [17]
  • Li L [17]
  • Boudker O [15]
  • Reddy KD [6]
  • Eliezer D [6]
  • Huang Y [6]
  • Zhan W [6]
  • Matthies D [4]
  • Yu Z [4]
  • Chakraborty AA [2]
  • Stauffer SR [2]
  • Coker JA [2]
  • Earsley A [2]

Journal

  • NAT COMMUN [44]
  • J AM CHEM SOC [13]
  • BIORXIV [10]
  • SCI ADV [4]
  • TO BE PUBLISHED [4]
  • EMBO J [2]

Software

  • CRYOSPARC [22]
  • RELION [14]

Microscope

  • FEI TITAN KRIOS [57]
  • TFS KRIOS [13]
  • FEI/PHILIPS CM300FEG/T [6]
  • TFS GLACIOS [1]

Electron Source

  • FIELD EMISSION GUN [77]

Film or detector model

  • GATAN K3 6K X 4K [50]
  • GATAN K3 BIOQUANTUM 6K X 4K [25]
  • FEI FALCON IV 4K X 4K [1]
  • GATAN K2 SUMMIT 4K X 4K [1]

External links

  • PDB [77]
  • AlphaFold DB [36]
  • UniProt [36]
  • PDBe-Kb [34]
  • Gene Ontology [29]
  • InterPro [29]
  • ChEBI [25]
  • DrugBank [25]
  • ChEMBL [23]
  • Pfam [22]
  • Complex Portal [5]
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Showing 1 - 10 of 77. Page 1 of 8
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EMD-75049
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3D View
Human Excitatory Amino Acid Transporter 3 in 300 mM potassium and 0.1 mM Cmpd 3e in the outward-facing OFS state
CryoEM
Release date: May 27, 2026
Resolution: 3.24 Å
EM Method: Single-particle

Koochaki P, Qiu B, Coker JA, Earsley A, Wang NS, Romigh T, Goins CM, Salem C, Mi D, Days E, Bauer JA, Stauffer SR, Boudker O, Chakraborty AA

EMBO J (2026) [ DOI: doi:10.1038/s44318-026-00776-2 Pubmed: 42020573 ]

EMD-75048
Download Map
3D View
Human Excitatory Amino Acid Transporter 3 in 300 mM potassium and 0.1 mM Cmpd 3e in the intermediate outward-facing iOFS state
CryoEM
Release date: May 6, 2026
Resolution: 3.11 Å
EM Method: Single-particle

Koochaki P, Qiu B, Coker JA, Earsley A, Wang NS, Romigh T, Goins CM, Salem C, Mi D, Days E, Bauer JA, Stauffer SR, Boudker O, Chakraborty AA

EMBO J (2026) [ DOI: doi:10.1038/s44318-026-00776-2 Pubmed: 42020573 ]

EMD-71288
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Human EAAT3 with compound 3e and cholesterol bound at inward facing state
CryoEM
Release date: July 30, 2025
Resolution: 2.76 Å
EM Method: Single-particle
Fitted PDBs: 9p4x
Q-score: 0.577

Koochaki P, Qiu B, Coker JA, Earsley A, Wang NS, Romigh T, Goins CM, Stauffer SR, Boudker O, Chakraborty AA

bioRxiv (2025) [ DOI: doi:10.1101/2025.07.03.663021 Pubmed: 40672197 ]

EMD-71289
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3D View
Human EAAT3 with compound 3e and digitonin.glyco-diosgenin bound at inward facing state
CryoEM
Release date: July 30, 2025
Resolution: 2.56 Å
EM Method: Single-particle
Fitted PDBs: 9p4y
Q-score: 0.616

Koochaki P, Qiu B, Coker JA, Earsley A, Wang NS, Romigh T, Goins CM, Stauffer SR, Boudker O, Chakraborty AA

bioRxiv (2025) [ DOI: doi:10.1101/2025.07.03.663021 Pubmed: 40672197 ]

EMD-71290
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Human EAAT3 with sodium bound at inward facing state
CryoEM
Release date: July 30, 2025
Resolution: 2.83 Å
EM Method: Single-particle
Fitted PDBs: 9p4z
Q-score: 0.531

Koochaki P, Qiu B, Coker JA, Earsley A, Wang NS, Romigh T, Goins CM, Stauffer SR, Boudker O, Chakraborty AA

bioRxiv (2025) [ DOI: doi:10.1101/2025.07.03.663021 Pubmed: 40672197 ]

EMD-39652
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Subtomogram averaging of 8-nm-repeat triplet microtubule with only A and B tubules within basal bodies from mouse ependymal cells
CryoEM
Release date: June 4, 2025
Resolution: 7.6 Å
EM Method: Subtomogram averaging

Ma S, Li L, Li Z, Luo S, Liu Q, Du W, Qiu B, Gui M, Zhu X, Guo Q

Nat Commun (2025) 16 pp. 5932-5932 [ DOI: doi:10.1038/s41467-025-61015-6 Pubmed: 40593728 ]

EMD-39653
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3D View
Subtomogram averaging of 8-nm-repeat triplet microtubule with inner scaffold and complete C tubule within basal bodies from mouse ependymal cells
CryoEM
Release date: June 4, 2025
Resolution: 8.8 Å
EM Method: Subtomogram averaging

Ma S, Li L, Li Z, Luo S, Liu Q, Du W, Qiu B, Gui M, Zhu X, Guo Q

Nat Commun (2025) 16 pp. 5932-5932 [ DOI: doi:10.1038/s41467-025-61015-6 Pubmed: 40593728 ]

EMD-39654
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3D View
Subtomogram averaging of 8-nm-repeat triplet microtubule with pinhead within basal bodies from mouse ependymal cells
CryoEM
Release date: June 4, 2025
Resolution: 9.1 Å
EM Method: Subtomogram averaging

Ma S, Li L, Li Z, Luo S, Liu Q, Du W, Qiu B, Gui M, Zhu X, Guo Q

Nat Commun (2025) 16 pp. 5932-5932 [ DOI: doi:10.1038/s41467-025-61015-6 Pubmed: 40593728 ]

EMD-39655
Download Map
3D View
Subtomogram averaging of 8-nm-repeat triplet microtubule with inner scaffold and incomplete C tubule within basal bodies from mouse ependymal cells
CryoEM
Release date: June 4, 2025
Resolution: 9.2 Å
EM Method: Subtomogram averaging

Ma S, Li L, Li Z, Luo S, Liu Q, Du W, Qiu B, Gui M, Zhu X, Guo Q

Nat Commun (2025) 16 pp. 5932-5932 [ DOI: doi:10.1038/s41467-025-61015-6 Pubmed: 40593728 ]

EMD-39656
Download Map
3D View
Subtomogram averaging of 8-nm-repeat doublet microtubule within the transition zone from mouse ependymal cells
CryoEM
Release date: June 4, 2025
Resolution: 12.6 Å
EM Method: Subtomogram averaging

Ma S, Li L, Li Z, Luo S, Liu Q, Du W, Qiu B, Gui M, Zhu X, Guo Q

Nat Commun (2025) 16 pp. 5932-5932 [ DOI: doi:10.1038/s41467-025-61015-6 Pubmed: 40593728 ]

Sort by: Download
Showing 1 - 10 of 77. Page 1 of 8
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [77]

Current status

  • REL [77]

Sample type

  • Complex [48]
  • Protein [41]
  • Ligand [25]
  • Cell [17]
  • Cellular component [12]

Organism

  • Mus musculus [36]
  • Homo sapiens [28]
  • Pyrococcus horikoshii [13]

EM Method

  • Single-particle [52]
  • Subtomogram averaging [15]
  • Tomography [10]

Resolution

  • ≥ 2Å and < 3Å [25]
  • ≥ 3Å and < 4Å [27]
  • ≥ 6Å and < 8Å [1]
  • ≥ 8Å and < 12Å [4]
  • ≥ 12Å and < 16Å [2]
  • ≥ 16Å and < 20Å [1]
  • ≥ 20Å and < 30Å [7]

Model molecular weight

  • 0-50 kDa [7]
  • 50-100 kDa [11]
  • 100-250 kDa [9]
  • 250-500 kDa [1]
  • 500-1000 kDa [1]

Release Date

  • 2026 [2]
  • 2025 [27]
  • 2024 [19]
  • 2023 [22]
  • 2021 [7]

Author by name

  • Qiu B [77]
  • Boudker O [41]
  • Zhu X [36]
  • Cong Y [19]
  • Fang C [19]
  • Feng Y [19]
  • Hong Q [19]
  • Li J [19]
  • Lin C [19]
  • Luo J [19]
  • Ma R [19]
  • Meng X [19]
  • Pan C [19]
  • Shi X [19]
  • Tong Y [19]
  • Xu C [19]
  • Yan X [19]
  • Du W [17]
  • Gui M [17]
  • Guo Q [17]
  • Li L [17]
  • Li Z [17]
  • Liu Q [17]
  • Luo S [17]
  • Ma S [17]
  • Bracken C [13]
  • Eliezer D [13]
  • Huang Y [13]
  • Reddy KD [13]
  • Zhan W [13]
  • Cong X [8]
  • Yao C [8]
  • Fortea E [7]
  • Matthies D [7]
  • Yu Z [7]
  • Chakraborty AA [5]
  • Coker JA [5]
  • Earsley A [5]
  • Goins CM [5]
  • Koochaki P [5]
  • Romigh T [5]
  • Stauffer SR [5]
  • Wang NS [5]
  • Bauer JA [2]
  • Days E [2]
  • Mi D [2]
  • Salem C [2]
  • Du M [1]

Author by ORCID

  • Zhu X [36]
  • Qiu B [31]
  • Yan X [19]
  • Cong Y [19]
  • Hong Q [19]
  • Meng X [19]
  • Luo J [19]
  • Fang C [19]
  • Liu Q [17]
  • Gui M [17]
  • Ma S [17]
  • Guo Q [17]
  • Li L [17]
  • Boudker O [15]
  • Reddy KD [6]
  • Eliezer D [6]
  • Huang Y [6]
  • Zhan W [6]
  • Matthies D [4]
  • Yu Z [4]
  • Chakraborty AA [2]
  • Stauffer SR [2]
  • Coker JA [2]
  • Earsley A [2]

Journal

  • NAT COMMUN [44]
  • J AM CHEM SOC [13]
  • BIORXIV [10]
  • SCI ADV [4]
  • TO BE PUBLISHED [4]
  • EMBO J [2]

Software

  • CRYOSPARC [22]
  • RELION [14]

Microscope

  • FEI TITAN KRIOS [57]
  • TFS KRIOS [13]
  • FEI/PHILIPS CM300FEG/T [6]
  • TFS GLACIOS [1]

Electron Source

  • FIELD EMISSION GUN [77]

Film or detector model

  • GATAN K3 6K X 4K [50]
  • GATAN K3 BIOQUANTUM 6K X 4K [25]
  • FEI FALCON IV 4K X 4K [1]
  • GATAN K2 SUMMIT 4K X 4K [1]

External links

  • PDB [77]
  • AlphaFold DB [36]
  • UniProt [36]
  • PDBe-Kb [34]
  • Gene Ontology [29]
  • InterPro [29]
  • ChEBI [25]
  • DrugBank [25]
  • ChEMBL [23]
  • Pfam [22]
  • Complex Portal [5]