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author:"Qin Y"

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Current Database

  • EMDB [84]

Current status

  • REL [84]

Sample type

  • Complex [79]
  • Protein [40]
  • Ligand [19]
  • Sample [16]
  • RNA [10]
  • DNA [4]
  • Cell [2]
  • Cellular component [2]
  • Virus [1]

Organism

  • Homo sapiens [25]
  • Escherichia coli [23]
  • Severe acute respiratory syndrome coronavirus [12]
  • Saccharomyces cerevisiae [11]
  • Mus musculus [9]
  • Mumps orthorubulavirus [9]
  • Xenopus laevis [4]
  • Xenopus tropicalis [4]
  • Mumps orthorubulavirus [2]
  • Bos taurus [2]
  • Influenza a virus [1]
  • Adeno-associated dependoparvovirus a [1]
  • Nipah virus [1]
  • Synthetic construct [1]
  • (no species) [1]
  • Escherichia coli [1]

EM Method

  • Single-particle [79]
  • Helical reconstruction [5]

Resolution

  • ≥ 2Å and < 3Å [27]
  • ≥ 3Å and < 4Å [39]
  • ≥ 4Å and < 5Å [7]
  • ≥ 5Å and < 6Å [4]
  • ≥ 6Å and < 8Å [4]
  • ≥ 8Å and < 12Å [3]

Model molecular weight

  • 50-100 kDa [2]
  • 100-250 kDa [12]
  • 250-500 kDa [6]
  • 500-1000 kDa [2]
  • 1-2 MDa [2]
  • 2-5 MDa [9]

Release Date

  • 2026 [15]
  • 2025 [4]
  • 2024 [7]
  • 2023 [2]
  • 2022 [23]
  • 2021 [13]
  • 2020 [4]
  • 2016 [1]
  • 2015 [14]
  • 2009 [1]

Author by name

  • Qin Y [84]
  • Shen Q [25]
  • Liu Y [21]
  • Li X [20]
  • Su X [19]
  • Li T [18]
  • Qi L [18]
  • Shen QT [18]
  • Chu X [16]
  • Li L [16]
  • Lin J [16]
  • Liu M [16]
  • Lu G [16]
  • Zhang Z [16]
  • Zhang H [15]
  • Chen L [13]
  • Cheng Y [13]
  • Chiu S [13]
  • Gong R [13]
  • Li M [13]
  • Cao S [12]
  • Mu J [12]
  • Rao G [12]
  • Wu B [12]
  • Yi Y [12]
  • Zhao S [12]
  • Brandman O [11]
  • Cox J [11]
  • Frost A [11]
  • Lambowitz AM [11]
  • Larson M [11]
  • Park J [11]
  • Parsawar K [11]
  • Shen PS [11]
  • Weissman JS [11]
  • Larson MH [9]
  • Shan H [9]
  • Cao Y [8]
  • Zhang N [8]
  • Zhang Y [8]
  • Wang L [7]
  • Wang Y [7]
  • Zhang D [7]
  • Dang S [5]
  • Lu Y [5]
  • Xu Y [5]
  • Cheng Z [4]
  • Deng P [4]
  • Gao N [4]
  • Gozani O [4]
  • Jia Y [4]
  • Jiang T [4]
  • Li W [4]
  • Patel DJ [4]
  • Ren J [4]
  • Sengupta D [4]
  • Tian W [4]
  • Wang R [4]
  • Wang X [4]
  • Wang Z [4]
  • Yuan G [4]
  • Zhou Y [4]
  • Cao X [3]
  • Chen C [3]
  • Debose-boyd RA [3]
  • Duan Z [3]
  • Guo Y [3]
  • Jiang Y [3]
  • Lee CH [3]
  • Li Y [3]
  • Lin X [3]
  • Liu G [3]
  • Long T [3]
  • Song G [3]
  • Wang J [3]
  • Yan K [3]
  • Yang J [3]
  • Zhao B [3]
  • Zhen Q [3]
  • Bai Y [2]
  • Cheng E [2]
  • Cui Y [2]
  • Guo X [2]
  • He X [2]
  • Huo Y [2]
  • Huo YG [2]
  • Li H [2]
  • Low J [2]
  • Luo J [2]
  • Ma L [2]
  • Sha J [2]
  • Shi Y [2]
  • Tu H [2]
  • Wu S [2]
  • Xiao H [2]
  • Xie W [2]
  • Xie XS [2]
  • Xu G [2]
  • Yang L [2]
  • Yao L [2]

Author by ORCID

  • Shen QT [18]
  • Chu X [16]
  • Su X [16]
  • Qi L [16]
  • Liu Y [16]
  • Qin Y [6]
  • Dang S [5]
  • Li X [5]
  • Zhang Y [5]
  • Qin Y [5]
  • Wang L [4]
  • Wang Y [4]
  • Lu Y [4]
  • Xu Y [4]
  • Cao Y [4]
  • Wang X [4]
  • Liu Y [3]
  • Yang J [3]
  • Zhao B [3]
  • Wang J [3]
  • Zhang Z [3]
  • Long T [3]
  • Lee CH [3]
  • Xie XS [2]
  • Zhang H [2]
  • Wang R [2]
  • Guo X [2]
  • Huo Y [2]
  • Zhang H [1]
  • Chiu S [1]
  • Gong R [1]
  • Sun X [1]
  • Yu C [1]
  • Yao Y [1]
  • Li S [1]
  • Fan P [1]
  • Ke X [1]
  • Shi YS [1]
  • Liu F [1]
  • Zhang K [1]
  • Wang Y [1]
  • Jiang H [1]
  • Luo S [1]
  • Zheng Q [1]
  • Chen L [1]

Journal

  • TO BE PUBLISHED [25]
  • PNAS [16]
  • SCIENCE [11]
  • NAT COMMUN [8]
  • COMMUN BIOL [6]
  • NATURE [6]
  • NAT STRUCT MOL BIOL [4]
  • SCI ADV [3]
  • CELL RES [2]
  • ELIFE [1]
  • NAT CHEM BIOL [1]
  • NUCLEIC ACIDS RES [1]

Software

  • RELION, CTFFIND3 [11]
  • RELION [4]
  • CRYOSPARC [3]
  • CHIMERA [2]
  • SPIDER, RELION [2]
  • COOT [1]
  • MDFF [1]
  • MOD-EM AND FLEX-EM [1]
  • SITUS [1]
  • SPIDER [1]

Microscope

  • FEI TITAN KRIOS [54]
  • JEOL CRYO ARM 300 [12]
  • FEI POLARA 300 [11]
  • FEI TALOS ARCTICA [4]
  • TFS KRIOS [2]
  • FEI TECNAI F30 [1]

Electron Source

  • FIELD EMISSION GUN [84]

Film or detector model

  • GATAN K3 6K X 4K [26]
  • GATAN K3 BIOQUANTUM 6K X 4K [24]
  • GATAN K2 SUMMIT 4K X 4K [18]
  • GATAN K2 4K X 4K [11]
  • FEI EAGLE 4K X 4K [1]
  • FEI FALCON I 4K X 4K [1]
  • FEI FALCON IV 4K X 4K [1]
  • GATAN K3 BIOCONTINUUM 6K X 4K [1]
  • KODAK SO-163 FILM [1]

External links

  • UniProt [34]
  • PDB [33]
  • PDBe-Kb [33]
  • AlphaFold DB [31]
  • Pfam [25]
  • Gene Ontology [23]
  • InterPro [22]
  • ChEBI [19]
  • ChEMBL [18]
  • DrugBank [17]
  • Complex Portal [16]
  • SCOP2 [1]
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Showing 1 - 10 of 84. Page 1 of 9
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EMD-66028
Download Map
3D View
Tti1-Telo2 complex
CryoEM
Release date: Sept. 2, 2026
Resolution: 3.83 Å
EM Method: Single-particle
Fitted PDBs: 9wjs
Q-score: 0.136
Similar entry percentile: 2%

Qin Y, Xu G

To Be Published

EMD-66034
Download Map
3D View
Tti2-Tti1-C
CryoEM
Release date: Sept. 2, 2026
Resolution: 4.1 Å
EM Method: Single-particle
Fitted PDBs: 9wjy
Q-score: 0.199
Similar entry percentile: 7%

Qin Y, Xu G

To Be Published

EMD-64592
Download Map
3D View
The binding of a C-based single-domain antibody stabilizes spikes of SARS-CoV2 JN.1 in all-RBD-up conformation
CryoEM
Release date: May 27, 2026
Resolution: 3.14 Å
EM Method: Single-particle

Wu B, Rao G, Zhang H, Yi Y, Zhao S, Qin Y, Li M, Chen L, Zhang Z, Zhang Z, Mu J, Chiu S, Cao S, Gong R

To Be Published

EMD-64593
Download Map
3D View
The binding of a C-based single-domain antibody stabilizes spikes of SARS-CoV2 Delta in all-RBD-up conformation
CryoEM
Release date: May 27, 2026
Resolution: 3.12 Å
EM Method: Single-particle

Wu B, Rao G, Zhang H, Yi Y, Zhao S, Qin Y, Li M, Chen L, Zhang Z, Zhang Z, Mu J, Chiu S, Cao S, Gong R

To Be Published

EMD-64594
Download Map
3D View
The binding of a C-based single-domain antibody stabilizes spikes of SARS-CoV2 BA.5 in all-RBD-up conformation
CryoEM
Release date: May 27, 2026
Resolution: 4.22 Å
EM Method: Single-particle

Wu B, Rao G, Zhang H, Yi Y, Zhao S, Qin Y, Li M, Chen L, Zhang Z, Zhang Z, Mu J, Chiu S, Cao S, Gong R

To Be Published

EMD-64595
Download Map
3D View
The binding of a C-based single-domain antibody stabilizes spikes of SARS-CoV2 BA.2 in all-RBD-up conformation
CryoEM
Release date: May 27, 2026
Resolution: 3.65 Å
EM Method: Single-particle

Wu B, Rao G, Zhang H, Yi Y, Zhao S, Qin Y, Li M, Chen L, Zhang Z, Zhang Z, Mu J, Chiu S, Cao S, Gong R

To Be Published

EMD-64596
Download Map
3D View
The binding of a C-based single-domain antibody stabilizes spikes of SARS-CoV2 BA.1 in all-RBD-up conformation
CryoEM
Release date: May 27, 2026
Resolution: 3.4 Å
EM Method: Single-particle

Wu B, Rao G, Zhang H, Yi Y, Zhao S, Qin Y, Li M, Chen L, Zhang Z, Zhang Z, Mu J, Chiu S, Cao S, Gong R

To Be Published

EMD-64597
Download Map
3D View
The local refine of 3D reconstruction of the complex formed by SARS-CoV2 BA.1 spike glycoprotein and a single-domain antibody
CryoEM
Release date: May 27, 2026
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 9uxs
Q-score: 0.441
Similar entry percentile: 45%

Wu B, Rao G, Zhang H, Yi Y, Zhao S, Qin Y, Li M, Chen L, Zhang Z, Zhang Z, Mu J, Chiu S, Cao S, Gong R

To Be Published

EMD-64598
Download Map
3D View
Three RBD domains of the spike protein of SARS-CoV-2 JN.1 present all down conformation.
CryoEM
Release date: May 27, 2026
Resolution: 3.03 Å
EM Method: Single-particle

Wu B, Rao G, Zhang H, Yi Y, Zhao S, Qin Y, Li M, Chen L, Zhang Z, Zhang Z, Mu J, Chiu S, Cao S, Gong R

To Be Published

EMD-64599
Download Map
3D View
Three RBD domains of the spike protein of SARS-CoV-2 JN.1 present two up and one down conformation
CryoEM
Release date: May 27, 2026
Resolution: 3.05 Å
EM Method: Single-particle

Wu B, Rao G, Zhang H, Yi Y, Zhao S, Qin Y, Li M, Chen L, Zhang Z, Zhang Z, Mu J, Chiu S, Cao S, Gong R

To Be Published

Sort by: Download
Showing 1 - 10 of 84. Page 1 of 9
Display:
Statistics
×

Download


Preview 10 entries View All Download file

Filter By

Current Database

  • EMDB [84]

Current status

  • REL [84]

Sample type

  • Complex [79]
  • Protein [40]
  • Ligand [19]
  • Sample [16]
  • RNA [10]
  • DNA [4]
  • Cell [2]
  • Cellular component [2]
  • Virus [1]

Organism

  • Homo sapiens [25]
  • Escherichia coli [23]
  • Severe acute respiratory syndrome coronavirus [12]
  • Saccharomyces cerevisiae [11]
  • Mus musculus [9]
  • Mumps orthorubulavirus [9]
  • Xenopus laevis [4]
  • Xenopus tropicalis [4]
  • Mumps orthorubulavirus [2]
  • Bos taurus [2]
  • Influenza a virus [1]
  • Adeno-associated dependoparvovirus a [1]
  • Nipah virus [1]
  • Synthetic construct [1]
  • (no species) [1]
  • Escherichia coli [1]

EM Method

  • Single-particle [79]
  • Helical reconstruction [5]

Resolution

  • ≥ 2Å and < 3Å [27]
  • ≥ 3Å and < 4Å [39]
  • ≥ 4Å and < 5Å [7]
  • ≥ 5Å and < 6Å [4]
  • ≥ 6Å and < 8Å [4]
  • ≥ 8Å and < 12Å [3]

Model molecular weight

  • 50-100 kDa [2]
  • 100-250 kDa [12]
  • 250-500 kDa [6]
  • 500-1000 kDa [2]
  • 1-2 MDa [2]
  • 2-5 MDa [9]

Release Date

  • 2026 [15]
  • 2025 [4]
  • 2024 [7]
  • 2023 [2]
  • 2022 [23]
  • 2021 [13]
  • 2020 [4]
  • 2016 [1]
  • 2015 [14]
  • 2009 [1]

Author by name

  • Qin Y [84]
  • Shen Q [25]
  • Liu Y [21]
  • Li X [20]
  • Su X [19]
  • Li T [18]
  • Qi L [18]
  • Shen QT [18]
  • Chu X [16]
  • Li L [16]
  • Lin J [16]
  • Liu M [16]
  • Lu G [16]
  • Zhang Z [16]
  • Zhang H [15]
  • Chen L [13]
  • Cheng Y [13]
  • Chiu S [13]
  • Gong R [13]
  • Li M [13]
  • Cao S [12]
  • Mu J [12]
  • Rao G [12]
  • Wu B [12]
  • Yi Y [12]
  • Zhao S [12]
  • Brandman O [11]
  • Cox J [11]
  • Frost A [11]
  • Lambowitz AM [11]
  • Larson M [11]
  • Park J [11]
  • Parsawar K [11]
  • Shen PS [11]
  • Weissman JS [11]
  • Larson MH [9]
  • Shan H [9]
  • Cao Y [8]
  • Zhang N [8]
  • Zhang Y [8]
  • Wang L [7]
  • Wang Y [7]
  • Zhang D [7]
  • Dang S [5]
  • Lu Y [5]
  • Xu Y [5]
  • Cheng Z [4]
  • Deng P [4]
  • Gao N [4]
  • Gozani O [4]
  • Jia Y [4]
  • Jiang T [4]
  • Li W [4]
  • Patel DJ [4]
  • Ren J [4]
  • Sengupta D [4]
  • Tian W [4]
  • Wang R [4]
  • Wang X [4]
  • Wang Z [4]
  • Yuan G [4]
  • Zhou Y [4]
  • Cao X [3]
  • Chen C [3]
  • Debose-boyd RA [3]
  • Duan Z [3]
  • Guo Y [3]
  • Jiang Y [3]
  • Lee CH [3]
  • Li Y [3]
  • Lin X [3]
  • Liu G [3]
  • Long T [3]
  • Song G [3]
  • Wang J [3]
  • Yan K [3]
  • Yang J [3]
  • Zhao B [3]
  • Zhen Q [3]
  • Bai Y [2]
  • Cheng E [2]
  • Cui Y [2]
  • Guo X [2]
  • He X [2]
  • Huo Y [2]
  • Huo YG [2]
  • Li H [2]
  • Low J [2]
  • Luo J [2]
  • Ma L [2]
  • Sha J [2]
  • Shi Y [2]
  • Tu H [2]
  • Wu S [2]
  • Xiao H [2]
  • Xie W [2]
  • Xie XS [2]
  • Xu G [2]
  • Yang L [2]
  • Yao L [2]

Author by ORCID

  • Shen QT [18]
  • Chu X [16]
  • Su X [16]
  • Qi L [16]
  • Liu Y [16]
  • Qin Y [6]
  • Dang S [5]
  • Li X [5]
  • Zhang Y [5]
  • Qin Y [5]
  • Wang L [4]
  • Wang Y [4]
  • Lu Y [4]
  • Xu Y [4]
  • Cao Y [4]
  • Wang X [4]
  • Liu Y [3]
  • Yang J [3]
  • Zhao B [3]
  • Wang J [3]
  • Zhang Z [3]
  • Long T [3]
  • Lee CH [3]
  • Xie XS [2]
  • Zhang H [2]
  • Wang R [2]
  • Guo X [2]
  • Huo Y [2]
  • Zhang H [1]
  • Chiu S [1]
  • Gong R [1]
  • Sun X [1]
  • Yu C [1]
  • Yao Y [1]
  • Li S [1]
  • Fan P [1]
  • Ke X [1]
  • Shi YS [1]
  • Liu F [1]
  • Zhang K [1]
  • Wang Y [1]
  • Jiang H [1]
  • Luo S [1]
  • Zheng Q [1]
  • Chen L [1]

Journal

  • TO BE PUBLISHED [25]
  • PNAS [16]
  • SCIENCE [11]
  • NAT COMMUN [8]
  • COMMUN BIOL [6]
  • NATURE [6]
  • NAT STRUCT MOL BIOL [4]
  • SCI ADV [3]
  • CELL RES [2]
  • ELIFE [1]
  • NAT CHEM BIOL [1]
  • NUCLEIC ACIDS RES [1]

Software

  • RELION, CTFFIND3 [11]
  • RELION [4]
  • CRYOSPARC [3]
  • CHIMERA [2]
  • SPIDER, RELION [2]
  • COOT [1]
  • MDFF [1]
  • MOD-EM AND FLEX-EM [1]
  • SITUS [1]
  • SPIDER [1]

Microscope

  • FEI TITAN KRIOS [54]
  • JEOL CRYO ARM 300 [12]
  • FEI POLARA 300 [11]
  • FEI TALOS ARCTICA [4]
  • TFS KRIOS [2]
  • FEI TECNAI F30 [1]

Electron Source

  • FIELD EMISSION GUN [84]

Film or detector model

  • GATAN K3 6K X 4K [26]
  • GATAN K3 BIOQUANTUM 6K X 4K [24]
  • GATAN K2 SUMMIT 4K X 4K [18]
  • GATAN K2 4K X 4K [11]
  • FEI EAGLE 4K X 4K [1]
  • FEI FALCON I 4K X 4K [1]
  • FEI FALCON IV 4K X 4K [1]
  • GATAN K3 BIOCONTINUUM 6K X 4K [1]
  • KODAK SO-163 FILM [1]

External links

  • UniProt [34]
  • PDB [33]
  • PDBe-Kb [33]
  • AlphaFold DB [31]
  • Pfam [25]
  • Gene Ontology [23]
  • InterPro [22]
  • ChEBI [19]
  • ChEMBL [18]
  • DrugBank [17]
  • Complex Portal [16]
  • SCOP2 [1]