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author:"Qin D"

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Current Database

  • EMDB [14]

Current status

  • REL [14]

Sample type

  • Complex [14]
  • Protein [13]
  • Ligand [5]
  • DNA [4]

Organism

  • Mus musculus [6]
  • Homo sapiens [6]
  • Xenopus laevis [4]
  • Synthetic construct [2]
  • Saccharomyces cerevisiae [2]
  • (no species) [2]
  • (no species) [1]

EM Method

  • Single-particle [14]

Resolution

  • ≥ 2Å and < 3Å [4]
  • ≥ 3Å and < 4Å [9]
  • ≥ 4Å and < 5Å [1]

Model molecular weight

  • 100-250 kDa [6]
  • 250-500 kDa [4]
  • 500-1000 kDa [3]

Release Date

  • 2026 [6]
  • 2025 [3]
  • 2024 [5]

Author by name

  • Qin D [14]
  • Xu C [12]
  • Chen J [9]
  • Deng D [8]
  • Gao Z [8]
  • Li L [8]
  • Li J [7]
  • Wang X [7]
  • Han Z [6]
  • He J [6]
  • Li H [6]
  • Liu Q [6]
  • Pei D [6]
  • Qi Q [6]
  • Wang C [6]
  • Zhang Y [6]
  • Zou B [6]
  • Chi P [5]
  • Lu Y [5]
  • Ou G [5]
  • Guo L [4]
  • Liu S [4]
  • Luo Q [4]
  • Shi H [4]
  • Sun F [4]
  • Xiao Q [4]
  • Xu P [4]
  • Li JH [3]
  • Lu X [3]
  • Wu Y [3]
  • Zhou D [3]
  • Bai Y [2]
  • Chao W [2]
  • Chao WCH [2]
  • Dong S [2]
  • Gu C [2]
  • Hu T [2]
  • Kang X [2]
  • Liu J [2]
  • Liu QT [2]
  • Xie Y [2]
  • Yang X [2]
  • Yi L [2]
  • Zhang N [2]
  • Zhao H [2]
  • Zhou F [2]
  • Zhou Y [2]
  • Hu H [1]
  • Jiang Y [1]
  • Jiao H [1]
  • Min L [1]
  • Nie X [1]
  • Qi QQ [1]
  • Wang Q [1]
  • Wang R [1]
  • Xie W [1]
  • Yu X [1]
  • Zhang Z [1]

Author by ORCID

  • Li L [8]
  • Deng D [8]
  • He J [6]
  • Chen J [5]
  • Li J [5]
  • Chi P [5]
  • Lu Y [5]
  • Chen J [4]
  • Shi H [4]
  • Gao Z [3]
  • Kang X [2]
  • Liu J [2]
  • Li L [2]
  • Li J [2]
  • Wang X [1]
  • Jiao H [1]
  • Xie W [1]
  • Hu H [1]
  • Ou G [1]

Journal

  • NUCLEIC ACIDS RES [6]
  • NAT STRUCT MOL BIOL [5]
  • NAT COMMUN [3]

Software

  • CRYOSPARC [6]

Microscope

  • TFS KRIOS [8]
  • FEI TITAN KRIOS [6]

Electron Source

  • FIELD EMISSION GUN [14]

Film or detector model

  • FEI FALCON IV 4K X 4K [6]
  • GATAN K2 SUMMIT 4K X 4K [4]
  • GATAN K3 6K X 4K [4]

External links

  • PDB [14]
  • AlphaFold DB [13]
  • PDBe-Kb [13]
  • Pfam [13]
  • UniProt [13]
  • Gene Ontology [8]
  • ChEBI [5]
  • ChEMBL [5]
  • DrugBank [5]
  • InterPro [5]
  • Complex Portal [2]
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Showing 1 - 10 of 14. Page 1 of 2
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EMD-64742
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3D View
Cryo-EM structure of the histone deacetylase complex Rpd3L in complex with di-nucleosome
CryoEM
Release date: May 27, 2026
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 9v2w
Q-score: 0.362

Zhao H, Li H, Wang C, Yang X, Zou B, Dong S, Zhang N, Zhou Y, Yi L, Zhang Y, Xie Y, Qin D, Chao WCH, Pei D, He J

Nucleic Acids Res (2026) 54 [ DOI: doi:10.1093/nar/gkag443 Pubmed: 42152683 ]

EMD-64578
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3D View
local ARP-NCP structure of the ncBAF-nucleosome complex in the apo state
CryoEM
Release date: May 6, 2026
Resolution: 3.28 Å
EM Method: Single-particle
Fitted PDBs: 9uxa
Q-score: 0.385

Sun F, Zou B, Li H, Xu C, Luo Q, Wang C, Xu P, Pei D, Chen J, Qin D, Zhang Y, He J

Nucleic Acids Res (2026) 54 [ DOI: doi:10.1093/nar/gkag092 Pubmed: 41657245 ]

EMD-64579
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3D View
The apo density map of BCL7B-containing ARP module of the human SWI/SNF complex
CryoEM
Release date: May 6, 2026
Resolution: 2.92 Å
EM Method: Single-particle
Fitted PDBs: 9uxb
Q-score: 0.528

Sun F, Zou B, Li H, Xu C, Luo Q, Wang C, Xu P, Pei D, Chen J, Qin D, Zhang Y, He J

Nucleic Acids Res (2026) 54 [ DOI: doi:10.1093/nar/gkag092 Pubmed: 41657245 ]

EMD-64580
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3D View
The ADP-bound density map of BCL7B-containing ARP module of the human SWI/SNF complex
CryoEM
Release date: May 6, 2026
Resolution: 2.74 Å
EM Method: Single-particle
Fitted PDBs: 9uxc
Q-score: 0.442

Sun F, Zou B, Li H, Xu C, Luo Q, Wang C, Xu P, Pei D, Chen J, Qin D, Zhang Y, He J

Nucleic Acids Res (2026) 54 [ DOI: doi:10.1093/nar/gkag092 Pubmed: 41657245 ]

EMD-64741
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3D View
Cryo-EM structure of the histone deacetylase complex Rpd3L in complex with mono-nucleosome
CryoEM
Release date: May 6, 2026
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 9v2v
Q-score: 0.384

Zhao H, Li H, Wang C, Yang X, Zou B, Dong S, Zhang N, Zhou Y, Yi L, Zhang Y, Xie Y, Qin D, Chao WCH, Pei D, He J

Nucleic Acids Res (2026) 54 [ DOI: doi:10.1093/nar/gkag443 Pubmed: 42152683 ]

EMD-64577
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local ATPase-NCP density map of the ncBAF-nucleosome complex in the ADP-BeFx-bound state
CryoEM
Release date: March 18, 2026
Resolution: 3.05 Å
EM Method: Single-particle
Fitted PDBs: 9ux9
Q-score: 0.299

Sun F, Zou B, Li H, Xu C, Luo Q, Wang C, Xu P, Pei D, Chen J, Qin D, Zhang Y, He J

Nucleic Acids Res (2026) 54 [ DOI: doi:10.1093/nar/gkag092 Pubmed: 41657245 ]

EMD-63291
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Structure of human dimeric NLRP7-TCL1A complex
CryoEM
Release date: Dec. 10, 2025
Resolution: 3.58 Å
EM Method: Single-particle
Fitted PDBs: 9lq2
Q-score: 0.399

Gao Z, Liu Q, Li L, Hu T, Lu X, Wu Y, Qin D, Wang X, Gu C, Li J, Xu C, Zhou D, Zhou F, Bai Y, Kang X, Liu J, Deng D, Li L

Nat Commun (2026) 17 [ Pubmed: 41786744 DOI: doi:10.1038/s41467-026-69744-y ]

EMD-63292
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Structure of the human monomeric NLRP7-TCL1A complex
CryoEM
Release date: Dec. 10, 2025
Resolution: 4.12 Å
EM Method: Single-particle
Fitted PDBs: 9lq4
Q-score: 0.188

Gao Z, Liu Q, Li L, Hu T, Lu X, Wu Y, Qin D, Wang X, Gu C, Li J, Xu C, Zhou D, Zhou F, Bai Y, Kang X, Liu J, Deng D, Li L

Nat Commun (2026) 17 [ Pubmed: 41786744 DOI: doi:10.1038/s41467-026-69744-y ]

EMD-39049
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3D View
Cryo-EM map of mouse subcortical maternal complex containing MATER, TLE6, FLOPED, FILIA, and SPIN1
CryoEM
Release date: Feb. 12, 2025
Resolution: 3.16 Å
EM Method: Single-particle

Xu C, Qin D, Lu X, Qi Q, Wu Y, Wang Q, Han Z, Nie X, Jiang Y, Deng D, Xie W, Gao Z, Li L

Nat Struct Mol Biol (2025) 32 pp. 1358-1372 [ Pubmed: 40247146 DOI: doi:10.1038/s41594-025-01538-0 ]

EMD-38369
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3D View
Structure of mouse SCMC-14-3-3gama complex
CryoEM
Release date: Oct. 2, 2024
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 8xi3
Q-score: 0.532

Han Z, Wang R, Chi P, Zhang Z, Min L, Jiao H, Ou G, Zhou D, Qin D, Xu C, Gao Z, Qi Q, Li J, Lu Y, Wang X, Chen J, Yu X, Hu H, Li L, Deng D

Nat Commun (2024) 15 pp. 8887-8887 [ DOI: doi:10.1038/s41467-024-53277-3 Pubmed: 39406751 ]

Sort by: Download
Showing 1 - 10 of 14. Page 1 of 2
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [14]

Current status

  • REL [14]

Sample type

  • Complex [14]
  • Protein [13]
  • Ligand [5]
  • DNA [4]

Organism

  • Mus musculus [6]
  • Homo sapiens [6]
  • Xenopus laevis [4]
  • Synthetic construct [2]
  • Saccharomyces cerevisiae [2]
  • (no species) [2]
  • (no species) [1]

EM Method

  • Single-particle [14]

Resolution

  • ≥ 2Å and < 3Å [4]
  • ≥ 3Å and < 4Å [9]
  • ≥ 4Å and < 5Å [1]

Model molecular weight

  • 100-250 kDa [6]
  • 250-500 kDa [4]
  • 500-1000 kDa [3]

Release Date

  • 2026 [6]
  • 2025 [3]
  • 2024 [5]

Author by name

  • Qin D [14]
  • Xu C [12]
  • Chen J [9]
  • Deng D [8]
  • Gao Z [8]
  • Li L [8]
  • Li J [7]
  • Wang X [7]
  • Han Z [6]
  • He J [6]
  • Li H [6]
  • Liu Q [6]
  • Pei D [6]
  • Qi Q [6]
  • Wang C [6]
  • Zhang Y [6]
  • Zou B [6]
  • Chi P [5]
  • Lu Y [5]
  • Ou G [5]
  • Guo L [4]
  • Liu S [4]
  • Luo Q [4]
  • Shi H [4]
  • Sun F [4]
  • Xiao Q [4]
  • Xu P [4]
  • Li JH [3]
  • Lu X [3]
  • Wu Y [3]
  • Zhou D [3]
  • Bai Y [2]
  • Chao W [2]
  • Chao WCH [2]
  • Dong S [2]
  • Gu C [2]
  • Hu T [2]
  • Kang X [2]
  • Liu J [2]
  • Liu QT [2]
  • Xie Y [2]
  • Yang X [2]
  • Yi L [2]
  • Zhang N [2]
  • Zhao H [2]
  • Zhou F [2]
  • Zhou Y [2]
  • Hu H [1]
  • Jiang Y [1]
  • Jiao H [1]
  • Min L [1]
  • Nie X [1]
  • Qi QQ [1]
  • Wang Q [1]
  • Wang R [1]
  • Xie W [1]
  • Yu X [1]
  • Zhang Z [1]

Author by ORCID

  • Li L [8]
  • Deng D [8]
  • He J [6]
  • Chen J [5]
  • Li J [5]
  • Chi P [5]
  • Lu Y [5]
  • Chen J [4]
  • Shi H [4]
  • Gao Z [3]
  • Kang X [2]
  • Liu J [2]
  • Li L [2]
  • Li J [2]
  • Wang X [1]
  • Jiao H [1]
  • Xie W [1]
  • Hu H [1]
  • Ou G [1]

Journal

  • NUCLEIC ACIDS RES [6]
  • NAT STRUCT MOL BIOL [5]
  • NAT COMMUN [3]

Software

  • CRYOSPARC [6]

Microscope

  • TFS KRIOS [8]
  • FEI TITAN KRIOS [6]

Electron Source

  • FIELD EMISSION GUN [14]

Film or detector model

  • FEI FALCON IV 4K X 4K [6]
  • GATAN K2 SUMMIT 4K X 4K [4]
  • GATAN K3 6K X 4K [4]

External links

  • PDB [14]
  • AlphaFold DB [13]
  • PDBe-Kb [13]
  • Pfam [13]
  • UniProt [13]
  • Gene Ontology [8]
  • ChEBI [5]
  • ChEMBL [5]
  • DrugBank [5]
  • InterPro [5]
  • Complex Portal [2]