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author:"Pellegrino J"

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Current Database

  • EMDB [28]
  • EMPIAR [28]

Current status

  • REL [56]

Sample type

  • Complex [28]
  • Ligand [27]
  • Protein [27]
  • RNA [27]

Organism

  • Escherichia coli [28]
  • Streptomyces virginiae [3]
  • Escherichia coli [1]

EM Method

  • Single-particle [28]

Resolution

  • < 2Å [2]
  • ≥ 2Å and < 3Å [26]

Model molecular weight

  • 1-2 MDa [27]

Release Date

  • 2023 [34]
  • 2022 [2]
  • 2020 [20]

Author by name

  • Lee DJ [56]
  • Pellegrino J [56]
  • Fraser JS [55]
  • Seiple IB [55]
  • Li Q [13]
  • Biel JT [10]
  • Borrelli K [10]
  • Brilot AF [10]
  • Chaires HA [10]
  • Chesneau O [10]
  • Chow D [10]
  • Jacobson MP [10]
  • Ji K [10]
  • Muhle E [10]
  • Murray B [10]
  • Park JE [10]
  • Shinabarger D [10]
  • Tran AA [10]
  • Wang R [10]
  • Wolfe C [10]
  • Zhang N [10]
  • Van Zundert G [10]
  • Yeon SK [6]
  • Boyce JH [3]
  • Ecker AK [3]
  • Takahashi Y [3]
  • Edmonson Q [2]
  • Fraser J [1]
  • Seiple I [1]

Author by ORCID

  • Fraser JS [28]
  • Lee DJ [28]
  • Pellegrino J [28]
  • Seiple IB [28]
  • Li Q [13]
  • Jacobson MP [10]
  • Chaires HA [10]
  • Muhle E [10]
  • Wang R [10]
  • Yeon SK [6]
  • Ecker AK [3]
  • Takahashi Y [3]
  • Boyce JH [3]

Journal

  • NATURE [20]
  • TO BE PUBLISHED [18]

Microscope

  • FEI TITAN KRIOS [27]
  • FEI TALOS ARCTICA [1]

Electron Source

  • FIELD EMISSION GUN [28]

Film or detector model

  • GATAN K3 BIOQUANTUM 6K X 4K [18]
  • GATAN K2 SUMMIT 4K X 4K [9]
  • GATAN K3 6K X 4K [1]

EMPIAR Experiment type

  • EMDB [28]

EMPIAR Image category

  • MICROGRAPHS - MULTIFRAME [28]
  • MICROGRAPHS - SINGLE FRAME [15]

External links

  • EMDB [28]
  • EMPIAR [28]
  • PDB [28]
  • AlphaFold DB [27]
  • Gene Ontology [27]
  • InterPro [27]
  • PDBe-Kb [27]
  • Pfam [27]
  • UniProt [27]
  • ChEMBL [7]
  • ChEBI [6]
  • DrugBank [6]
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Showing 1 - 10 of 56. Page 1 of 6
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EMPIAR-11157
Related EMDB
EMD-27878
E. coli 50S ribosome bound to compound streptogramin A analog 3336
Release date: June 30, 2023
Dataset size: 2.4 TB
Experiment type: EMDB

Seiple IB, Pellegrino J, Fraser JS, Lee DJ, Li Q

To Be Published

Image sets:
  • dose weighted micrographs
  • unaligned movies
EMPIAR-11158
Related EMDB
EMD-27879
E. coli 50S ribosome bound to SLC09
Release date: June 30, 2023
Dataset size: 1.8 TB
Experiment type: EMDB

Seiple IB, Pellegrino J, Fraser JS, Lee DJ, Yeon SK

To Be Published

Image sets:
  • dose weighted micrographs
  • unaligned movies
EMPIAR-11159
Related EMDB
EMD-27880
E. coli 50S ribosome bound to SLC17
Release date: June 30, 2023
Dataset size: 1.5 TB
Experiment type: EMDB

Seiple IB, Pellegrino J, Fraser JS, Lee DJ, Yeon SK

To Be Published

Image sets:
  • dose weighted micrographs
  • unaligned movies
EMPIAR-11160
Related EMDB
EMD-27881
E. coli 50S ribosome bound to SLC21
Release date: June 30, 2023
Dataset size: 1.6 TB
Experiment type: EMDB

Seiple IB, Pellegrino J, Fraser JS, Lee DJ, Yeon SK

To Be Published

Image sets:
  • dose weighted micrographs
  • unaligned movies
EMPIAR-11161
Related EMDB
EMD-27882
E. coli 50S ribosome bound to SLC26
Release date: June 30, 2023
Dataset size: 2.3 TB
Experiment type: EMDB

Seiple IB, Pellegrino J, Fraser JS, Lee DJ, Yeon SK

To Be Published

Image sets:
  • dose weighted micrographs
  • unaligned movies
EMPIAR-11162
Related EMDB
EMD-27883
E. coli 50S ribosome bound to SLC30
Release date: June 30, 2023
Dataset size: 2.6 TB
Experiment type: EMDB

Seiple IB, Pellegrino J, Fraser JS, Lee DJ, Yeon SK

To Be Published

Image sets:
  • dose weighted micrographs
  • unaligned movies
EMPIAR-11163
Related EMDB
EMD-27884
E. coli 50S ribosome bound to SLC31
Release date: June 30, 2023
Dataset size: 3.6 TB
Experiment type: EMDB

Seiple IB, Pellegrino J, Fraser JS, Lee DJ, Yeon SK

To Be Published

Image sets:
  • dose weighted micrographs
  • unaligned movies
EMPIAR-11164
Related EMDB
EMD-27876
E. coli 50S ribosome bound to tiamulin and VS1
Release date: June 30, 2023
Dataset size: 2.0 TB
Experiment type: EMDB

Seiple IB, Pellegrino J, Fraser JS, Lee DJ, Edmonson Q

To Be Published

Image sets:
  • dose weighted micrographs
  • unaligned movies
EMPIAR-11165
Related EMDB
EMD-27877
E. coli 50S ribosome bound to tiamulin and azithromycin
Release date: June 30, 2023
Dataset size: 734.4 GB
Experiment type: EMDB

Seiple IB, Pellegrino J, Fraser JS, Lee DJ, Edmonson Q

To Be Published

Image sets:
  • dose weighted micrographs
  • unaligned movies
EMPIAR-11146
Related EMDB
EMD-27854
E. coli 50S ribosome bound to compound streptogramin analogs SA1 and SB1
Release date: June 29, 2023
Dataset size: 1.3 TB
Experiment type: EMDB

Takahashi Y, Seiple IB, Pellegrino J, Fraser JS, Lee DJ

To Be Published

Image sets:
  • dose weighted micrographs of 50S E. coli ribosome bound to clickSA and clickSB
  • unaligned movies of 50S E. coli ribosome bound to clickSA and clickSB
Sort by: Download
Showing 1 - 10 of 56. Page 1 of 6
Display:
Statistics
×

Download












































Preview first 10
Download

Filter By

Current Database

  • EMDB [28]
  • EMPIAR [28]

Current status

  • REL [56]

Sample type

  • Complex [28]
  • Ligand [27]
  • Protein [27]
  • RNA [27]

Organism

  • Escherichia coli [28]
  • Streptomyces virginiae [3]
  • Escherichia coli [1]

EM Method

  • Single-particle [28]

Resolution

  • < 2Å [2]
  • ≥ 2Å and < 3Å [26]

Model molecular weight

  • 1-2 MDa [27]

Release Date

  • 2023 [34]
  • 2022 [2]
  • 2020 [20]

Author by name

  • Lee DJ [56]
  • Pellegrino J [56]
  • Fraser JS [55]
  • Seiple IB [55]
  • Li Q [13]
  • Biel JT [10]
  • Borrelli K [10]
  • Brilot AF [10]
  • Chaires HA [10]
  • Chesneau O [10]
  • Chow D [10]
  • Jacobson MP [10]
  • Ji K [10]
  • Muhle E [10]
  • Murray B [10]
  • Park JE [10]
  • Shinabarger D [10]
  • Tran AA [10]
  • Wang R [10]
  • Wolfe C [10]
  • Zhang N [10]
  • Van Zundert G [10]
  • Yeon SK [6]
  • Boyce JH [3]
  • Ecker AK [3]
  • Takahashi Y [3]
  • Edmonson Q [2]
  • Fraser J [1]
  • Seiple I [1]

Author by ORCID

  • Fraser JS [28]
  • Lee DJ [28]
  • Pellegrino J [28]
  • Seiple IB [28]
  • Li Q [13]
  • Jacobson MP [10]
  • Chaires HA [10]
  • Muhle E [10]
  • Wang R [10]
  • Yeon SK [6]
  • Ecker AK [3]
  • Takahashi Y [3]
  • Boyce JH [3]

Journal

  • NATURE [20]
  • TO BE PUBLISHED [18]

Microscope

  • FEI TITAN KRIOS [27]
  • FEI TALOS ARCTICA [1]

Electron Source

  • FIELD EMISSION GUN [28]

Film or detector model

  • GATAN K3 BIOQUANTUM 6K X 4K [18]
  • GATAN K2 SUMMIT 4K X 4K [9]
  • GATAN K3 6K X 4K [1]

EMPIAR Experiment type

  • EMDB [28]

EMPIAR Image category

  • MICROGRAPHS - MULTIFRAME [28]
  • MICROGRAPHS - SINGLE FRAME [15]

External links

  • EMDB [28]
  • EMPIAR [28]
  • PDB [28]
  • AlphaFold DB [27]
  • Gene Ontology [27]
  • InterPro [27]
  • PDBe-Kb [27]
  • Pfam [27]
  • UniProt [27]
  • ChEMBL [7]
  • ChEBI [6]
  • DrugBank [6]