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author:"Pei D"

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Current Database

  • EMDB [39]

Current status

  • REL [39]

Sample type

  • Protein [39]
  • Complex [38]
  • Ligand [30]
  • DNA [4]
  • RNA [2]
  • Cellular component [1]

Organism

  • Homo sapiens [22]
  • Arabidopsis thaliana [8]
  • Synthetic construct [4]
  • Xenopus laevis [4]
  • (no species) [3]
  • Hyphochytrium catenoides [3]
  • Lachnospiraceae bacterium nd2006 [2]
  • Chlamydomonas reinhardtii [2]
  • Saccharomyces cerevisiae [2]
  • (no species) [2]
  • (no species) [1]

EM Method

  • Single-particle [39]

Resolution

  • ≥ 2Å and < 3Å [16]
  • ≥ 3Å and < 4Å [22]
  • ≥ 4Å and < 5Å [1]

Model molecular weight

  • 50-100 kDa [10]
  • 100-250 kDa [14]
  • 250-500 kDa [7]
  • 500-1000 kDa [8]

Release Date

  • 2026 [7]
  • 2025 [11]
  • 2024 [10]
  • 2023 [10]
  • 2022 [1]

Author by name

  • Pei D [39]
  • Shan Y [33]
  • Zhang M [33]
  • Zhang MF [28]
  • Chen M [16]
  • Guo X [13]
  • Li Y [11]
  • Zhang Y [7]
  • He J [6]
  • Li H [6]
  • Li X [6]
  • Qin D [6]
  • Wang C [6]
  • Wang Y [6]
  • Zhou X [6]
  • Zou B [6]
  • Xu B [5]
  • Ye S [5]
  • Zhao L [5]
  • Chen J [4]
  • Cox CD [4]
  • Liang Q [4]
  • Luo Q [4]
  • Shi S [4]
  • Sun F [4]
  • Wang Z [4]
  • Xu C [4]
  • Xu P [4]
  • Zhang B [3]
  • Cao F [2]
  • Chao W [2]
  • Chao WCH [2]
  • Dong S [2]
  • Hu M [2]
  • Li J [2]
  • Liang F [2]
  • Liang S [2]
  • Lou Z [2]
  • Qi W [2]
  • Shen Y [2]
  • Tian T [2]
  • Wang X [2]
  • Xie W [2]
  • Xie Y [2]
  • Xu Z [2]
  • Yang X [2]
  • Yi L [2]
  • Zhang N [2]
  • Zhao H [2]
  • Zhou Y [2]
  • Chang W [1]
  • Chen H [1]
  • Chen L [1]
  • Chi W [1]
  • Dong M [1]
  • Jiao W [1]
  • Ke M [1]
  • Kuang J [1]
  • Ma X [1]
  • Sheng L [1]
  • Shu X [1]
  • Tortorella MD [1]
  • Wang B [1]
  • Wang P [1]
  • Wen S [1]
  • Wu Z [1]
  • Yan H [1]
  • Yao G [1]
  • Zhai Z [1]
  • Zhang W [1]
  • Zhang X [1]
  • Zhao C [1]

Author by ORCID

  • Zhang M [29]
  • Pei D [29]
  • Shan Y [14]
  • He J [6]
  • Xu B [5]
  • Chen J [4]
  • Ye S [4]
  • Wang Y [4]
  • Cox CD [4]
  • Zhou X [2]
  • Liang F [2]
  • Shan Y [2]
  • Shi S [2]
  • Xie W [2]
  • Lou Z [2]
  • Liang S [2]
  • Liang Q [2]
  • Ma X [1]

Journal

  • NAT COMMUN [23]
  • NUCLEIC ACIDS RES [6]
  • ELIFE [5]
  • EMBO REP [2]
  • PROTEIN CELL [2]
  • CELL REP [1]

Software

  • CRYOSPARC [7]

Microscope

  • FEI TITAN KRIOS [21]
  • TFS KRIOS [6]
  • FEI MORGAGNI [4]
  • FEI TALOS ARCTICA [4]
  • FEI TECNAI 10 [3]
  • FEI TECNAI F30 [1]

Electron Source

  • FIELD EMISSION GUN [39]

Film or detector model

  • FEI FALCON IV 4K X 4K [25]
  • GATAN K3 6K X 4K [12]
  • FEI FALCON III 4K X 4K [2]

External links

  • AlphaFold DB [39]
  • PDB [39]
  • UniProt [39]
  • PDBe-Kb [38]
  • Pfam [34]
  • Gene Ontology [30]
  • InterPro [28]
  • ChEBI [23]
  • ChEMBL [17]
  • DrugBank [15]
  • Complex Portal [3]
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Showing 1 - 10 of 39. Page 1 of 4
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EMD-64742
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3D View
Cryo-EM structure of the histone deacetylase complex Rpd3L in complex with di-nucleosome
CryoEM
Release date: May 27, 2026
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 9v2w
Q-score: 0.362

Zhao H, Li H, Wang C, Yang X, Zou B, Dong S, Zhang N, Zhou Y, Yi L, Zhang Y, Xie Y, Qin D, Chao WCH, Pei D, He J

Nucleic Acids Res (2026) 54 [ DOI: doi:10.1093/nar/gkag443 Pubmed: 42152683 ]

EMD-64578
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3D View
local ARP-NCP structure of the ncBAF-nucleosome complex in the apo state
CryoEM
Release date: May 6, 2026
Resolution: 3.28 Å
EM Method: Single-particle
Fitted PDBs: 9uxa
Q-score: 0.385

Sun F, Zou B, Li H, Xu C, Luo Q, Wang C, Xu P, Pei D, Chen J, Qin D, Zhang Y, He J

Nucleic Acids Res (2026) 54 [ DOI: doi:10.1093/nar/gkag092 Pubmed: 41657245 ]

EMD-64579
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The apo density map of BCL7B-containing ARP module of the human SWI/SNF complex
CryoEM
Release date: May 6, 2026
Resolution: 2.92 Å
EM Method: Single-particle
Fitted PDBs: 9uxb
Q-score: 0.528

Sun F, Zou B, Li H, Xu C, Luo Q, Wang C, Xu P, Pei D, Chen J, Qin D, Zhang Y, He J

Nucleic Acids Res (2026) 54 [ DOI: doi:10.1093/nar/gkag092 Pubmed: 41657245 ]

EMD-64580
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The ADP-bound density map of BCL7B-containing ARP module of the human SWI/SNF complex
CryoEM
Release date: May 6, 2026
Resolution: 2.74 Å
EM Method: Single-particle
Fitted PDBs: 9uxc
Q-score: 0.442

Sun F, Zou B, Li H, Xu C, Luo Q, Wang C, Xu P, Pei D, Chen J, Qin D, Zhang Y, He J

Nucleic Acids Res (2026) 54 [ DOI: doi:10.1093/nar/gkag092 Pubmed: 41657245 ]

EMD-64741
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3D View
Cryo-EM structure of the histone deacetylase complex Rpd3L in complex with mono-nucleosome
CryoEM
Release date: May 6, 2026
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 9v2v
Q-score: 0.384

Zhao H, Li H, Wang C, Yang X, Zou B, Dong S, Zhang N, Zhou Y, Yi L, Zhang Y, Xie Y, Qin D, Chao WCH, Pei D, He J

Nucleic Acids Res (2026) 54 [ DOI: doi:10.1093/nar/gkag443 Pubmed: 42152683 ]

EMD-64577
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local ATPase-NCP density map of the ncBAF-nucleosome complex in the ADP-BeFx-bound state
CryoEM
Release date: March 18, 2026
Resolution: 3.05 Å
EM Method: Single-particle
Fitted PDBs: 9ux9
Q-score: 0.299

Sun F, Zou B, Li H, Xu C, Luo Q, Wang C, Xu P, Pei D, Chen J, Qin D, Zhang Y, He J

Nucleic Acids Res (2026) 54 [ DOI: doi:10.1093/nar/gkag092 Pubmed: 41657245 ]

EMD-63426
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TMEM164-substrate
CryoEM
Release date: Jan. 7, 2026
Resolution: 2.5 Å
EM Method: Single-particle
Fitted PDBs: 9lw1
Q-score: 0.56

Ke M, Shan Y, Zhai Z, Yao G, Guo X, Li X, Wu Z, Chen H, Zhang M, Chen M, Li Y, Zhao C, Wang B, Tortorella MD, Shu X, Zhang M, Kuang J, Pei D

Nat Commun (2025) 17 pp. 924-924 [ Pubmed: 41422090 DOI: doi:10.1038/s41467-025-67651-2 ]

EMD-62694
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3D View
structure of MCT2-embigin complex
CryoEM
Release date: Dec. 24, 2025
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 9l0b
Q-score: 0.355

Xu B, Zhou X, Shan Y, Shi S, Li J, Liang Q, Wang Z, Zhang M, Wang Y, Pei D, Ye S

EMBO Rep (2026) 27 pp. 677-703 [ Pubmed: 41381736 DOI: doi:10.1038/s44319-025-00661-9 ]

EMD-62696
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structure of MCT2-embigin-AR-C155858 complex
CryoEM
Release date: Dec. 24, 2025
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 9l0c
Q-score: 0.304

Xu B, Zhou X, Shan Y, Shi S, Li J, Liang Q, Wang Z, Zhang M, Wang Y, Pei D, Ye S

EMBO Rep (2026) 27 pp. 677-703 [ Pubmed: 41381736 DOI: doi:10.1038/s44319-025-00661-9 ]

EMD-62677
Download Map
3D View
structure of hZnT1 in apo state
CryoEM
Release date: Sept. 24, 2025
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 9kzw
Q-score: 0.474

Wang Y, Liang Q, Liang S, Shan Y, Shi S, Zhou X, Wang Z, Xu Z, Pei D, Zhang M, Lou Z, Xu B, Ye S

Protein Cell (2025) 16 pp. 991-996 [ DOI: doi:10.1093/procel/pwaf044 Pubmed: 40470835 ]

Sort by: Download
Showing 1 - 10 of 39. Page 1 of 4
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [39]

Current status

  • REL [39]

Sample type

  • Protein [39]
  • Complex [38]
  • Ligand [30]
  • DNA [4]
  • RNA [2]
  • Cellular component [1]

Organism

  • Homo sapiens [22]
  • Arabidopsis thaliana [8]
  • Synthetic construct [4]
  • Xenopus laevis [4]
  • (no species) [3]
  • Hyphochytrium catenoides [3]
  • Lachnospiraceae bacterium nd2006 [2]
  • Chlamydomonas reinhardtii [2]
  • Saccharomyces cerevisiae [2]
  • (no species) [2]
  • (no species) [1]

EM Method

  • Single-particle [39]

Resolution

  • ≥ 2Å and < 3Å [16]
  • ≥ 3Å and < 4Å [22]
  • ≥ 4Å and < 5Å [1]

Model molecular weight

  • 50-100 kDa [10]
  • 100-250 kDa [14]
  • 250-500 kDa [7]
  • 500-1000 kDa [8]

Release Date

  • 2026 [7]
  • 2025 [11]
  • 2024 [10]
  • 2023 [10]
  • 2022 [1]

Author by name

  • Pei D [39]
  • Shan Y [33]
  • Zhang M [33]
  • Zhang MF [28]
  • Chen M [16]
  • Guo X [13]
  • Li Y [11]
  • Zhang Y [7]
  • He J [6]
  • Li H [6]
  • Li X [6]
  • Qin D [6]
  • Wang C [6]
  • Wang Y [6]
  • Zhou X [6]
  • Zou B [6]
  • Xu B [5]
  • Ye S [5]
  • Zhao L [5]
  • Chen J [4]
  • Cox CD [4]
  • Liang Q [4]
  • Luo Q [4]
  • Shi S [4]
  • Sun F [4]
  • Wang Z [4]
  • Xu C [4]
  • Xu P [4]
  • Zhang B [3]
  • Cao F [2]
  • Chao W [2]
  • Chao WCH [2]
  • Dong S [2]
  • Hu M [2]
  • Li J [2]
  • Liang F [2]
  • Liang S [2]
  • Lou Z [2]
  • Qi W [2]
  • Shen Y [2]
  • Tian T [2]
  • Wang X [2]
  • Xie W [2]
  • Xie Y [2]
  • Xu Z [2]
  • Yang X [2]
  • Yi L [2]
  • Zhang N [2]
  • Zhao H [2]
  • Zhou Y [2]
  • Chang W [1]
  • Chen H [1]
  • Chen L [1]
  • Chi W [1]
  • Dong M [1]
  • Jiao W [1]
  • Ke M [1]
  • Kuang J [1]
  • Ma X [1]
  • Sheng L [1]
  • Shu X [1]
  • Tortorella MD [1]
  • Wang B [1]
  • Wang P [1]
  • Wen S [1]
  • Wu Z [1]
  • Yan H [1]
  • Yao G [1]
  • Zhai Z [1]
  • Zhang W [1]
  • Zhang X [1]
  • Zhao C [1]

Author by ORCID

  • Zhang M [29]
  • Pei D [29]
  • Shan Y [14]
  • He J [6]
  • Xu B [5]
  • Chen J [4]
  • Ye S [4]
  • Wang Y [4]
  • Cox CD [4]
  • Zhou X [2]
  • Liang F [2]
  • Shan Y [2]
  • Shi S [2]
  • Xie W [2]
  • Lou Z [2]
  • Liang S [2]
  • Liang Q [2]
  • Ma X [1]

Journal

  • NAT COMMUN [23]
  • NUCLEIC ACIDS RES [6]
  • ELIFE [5]
  • EMBO REP [2]
  • PROTEIN CELL [2]
  • CELL REP [1]

Software

  • CRYOSPARC [7]

Microscope

  • FEI TITAN KRIOS [21]
  • TFS KRIOS [6]
  • FEI MORGAGNI [4]
  • FEI TALOS ARCTICA [4]
  • FEI TECNAI 10 [3]
  • FEI TECNAI F30 [1]

Electron Source

  • FIELD EMISSION GUN [39]

Film or detector model

  • FEI FALCON IV 4K X 4K [25]
  • GATAN K3 6K X 4K [12]
  • FEI FALCON III 4K X 4K [2]

External links

  • AlphaFold DB [39]
  • PDB [39]
  • UniProt [39]
  • PDBe-Kb [38]
  • Pfam [34]
  • Gene Ontology [30]
  • InterPro [28]
  • ChEBI [23]
  • ChEMBL [17]
  • DrugBank [15]
  • Complex Portal [3]