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author:"Pedersen BP"

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Current Database

  • EMDB [40]

Current status

  • REL [40]

Sample type

  • Protein [40]
  • Complex [36]
  • Ligand [26]
  • Cellular component [4]

Organism

  • Escherichia coli [17]
  • Arabidopsis thaliana [12]
  • Saccharomyces cerevisiae [5]
  • Escherichia coli [4]
  • Homo sapiens [3]

EM Method

  • Single-particle [40]

Resolution

  • ≥ 2Å and < 3Å [10]
  • ≥ 3Å and < 4Å [29]
  • ≥ 6Å and < 8Å [1]

Model molecular weight

  • 0-50 kDa [4]
  • 50-100 kDa [8]
  • 100-250 kDa [15]

Release Date

  • 2026 [5]
  • 2025 [10]
  • 2024 [2]
  • 2023 [4]
  • 2022 [4]
  • 2021 [14]
  • 2019 [1]

Author by name

  • Pedersen BP [40]
  • Stokes DL [36]
  • Zhang X [20]
  • Larsen C [14]
  • Schlame M [14]
  • Sweet ME [14]
  • Hammes UZ [12]
  • Schulz L [12]
  • Ung KL [12]
  • Nel L [10]
  • Dedic E [8]
  • Koutnik-abele S [8]
  • Frain KM [6]
  • Hussein AK [6]
  • Thaysen K [5]
  • Winkler MBL [5]
  • Wustner D [5]
  • Amsinck BL [4]
  • Andersen CG [4]
  • Benhammouche I [4]
  • Bohush A [4]
  • Janacek DP [4]
  • Kolb M [4]
  • Olesen E [4]
  • Panyella Pedersen B [4]
  • Schiott B [4]
  • Stokes D [4]
  • Winkler M [4]
  • Zuzic L [4]
  • Driller JH [3]
  • Driller R [2]
  • Hussein A [1]
  • Kidmose RT [1]
  • Muench SP [1]
  • Rawson S [1]
  • Szomek M [1]

Author by ORCID

  • Pedersen BP [38]
  • Stokes DL [35]
  • Hammes UZ [12]
  • Ung KL [12]
  • Nel L [10]
  • Dedic E [8]
  • Schulz L [8]
  • Koutnik-abele S [8]
  • Zhang X [5]
  • Hussein AK [5]
  • Wustner D [5]
  • Kolb M [4]
  • Schiott B [4]
  • Thaysen K [4]
  • Bohush A [4]
  • Zuzic L [4]
  • Frain KM [4]
  • Amsinck BL [4]
  • Driller JH [3]
  • Rawson S [1]
  • Szomek M [1]
  • Winkler MBL [1]

Journal

  • PNAS [18]
  • NAT PLANTS [8]
  • TO BE PUBLISHED [6]
  • BIORXIV [5]
  • NATURE [4]
  • LIFE SCI ALLIANCE [2]
  • CELL [1]

Software

  • CRYOSPARC [35]
  • RELION [4]
  • COOT [2]

Microscope

  • FEI TITAN KRIOS [29]
  • TFS KRIOS [11]

Electron Source

  • FIELD EMISSION GUN [40]

Film or detector model

  • GATAN K3 BIOQUANTUM 6K X 4K [18]
  • GATAN K3 6K X 4K [12]
  • FEI FALCON IV 4K X 4K [6]
  • GATAN K2 QUANTUM 4K X 4K [3]
  • GATAN K2 SUMMIT 4K X 4K [1]

External links

  • PDB [40]
  • AlphaFold DB [39]
  • PDBe-Kb [39]
  • UniProt [39]
  • InterPro [27]
  • Pfam [27]
  • ChEBI [26]
  • ChEMBL [26]
  • DrugBank [26]
  • Gene Ontology [26]
  • Complex Portal [20]
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Showing 1 - 10 of 40. Page 1 of 4
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EMD-74910
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3D View
High-resolution cryo-EM structure of KdpFABC in the E1 state in lipid nanodisc
CryoEM
Release date: April 1, 2026
Resolution: 2.34 Å
EM Method: Single-particle
Fitted PDBs: 9zwk
Q-score: 0.514
Similar entry percentile: 21%

Hussein AK, Zhang X, Pedersen BP, Stokes DL

To Be Published

EMD-74911
Download Map
3D View
High-resolution cryo-EM structure of KdpFABC in the E1-ATP state in lipid nanodisc
CryoEM
Release date: April 1, 2026
Resolution: 2.28 Å
EM Method: Single-particle
Fitted PDBs: 9zwl
Q-score: 0.573
Similar entry percentile: 43%

Hussein AK, Zhang X, Pedersen BP, Stokes DL

To Be Published

EMD-74912
Download Map
3D View
High-resolution cryo-EM structure of KdpFABC in the E1P state in lipid nanodisc
CryoEM
Release date: April 1, 2026
Resolution: 2.25 Å
EM Method: Single-particle
Fitted PDBs: 9zwm
Q-score: 0.576
Similar entry percentile: 43%

Hussein AK, Zhang X, Pedersen BP, Stokes DL

To Be Published

EMD-74913
Download Map
3D View
High-resolution cryo-EM structure of KdpFABC in the E2P state in lipid nanodisc
CryoEM
Release date: April 1, 2026
Resolution: 2.58 Å
EM Method: Single-particle
Fitted PDBs: 9zwn
Q-score: 0.493
Similar entry percentile: 26%

Hussein AK, Zhang X, Pedersen BP, Stokes DL

To Be Published

EMD-74914
Download Map
3D View
High-resolution cryo-EM structure of KdpFABC in the E2 state in lipid nanodisc
CryoEM
Release date: April 1, 2026
Resolution: 2.72 Å
EM Method: Single-particle
Fitted PDBs: 9zwo
Q-score: 0.498
Similar entry percentile: 37%

Hussein AK, Zhang X, Pedersen BP, Stokes DL

To Be Published

EMD-51894
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3D View
Auxin transporter-like protein 3 LAX3 in the inward occluded state in complex with auxin Indole-3-acetic acid, IAA
CryoEM
Release date: Aug. 13, 2025
Resolution: 3.21 Å
EM Method: Single-particle
Fitted PDBs: 9h61
Q-score: 0.505
Similar entry percentile: 67%

Ung KL, Schulz L, Zuzic L, Amsinck BL, Koutnik-Abele S, Benhammouche I, Andersen CG, Nel L, Schiott B, Stokes DL, Hammes UZ, Pedersen BP

Nat Plants (2025) 11 pp. 1670-1680 [ Pubmed: 40759769 DOI: doi:10.1038/s41477-025-02056-z ]

EMD-51895
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3D View
Auxin transporter-like protein 3 LAX3 in the inward occluded state in complex with 2,4-Dichlorophenoxyacetic acid 2,4-D
CryoEM
Release date: Aug. 13, 2025
Resolution: 3.43 Å
EM Method: Single-particle
Fitted PDBs: 9h62
Q-score: 0.479
Similar entry percentile: 67%

Ung KL, Schulz L, Zuzic L, Amsinck BL, Koutnik-Abele S, Benhammouche I, Andersen CG, Nel L, Schiott B, Stokes DL, Hammes UZ, Pedersen BP

Nat Plants (2025) 11 pp. 1670-1680 [ Pubmed: 40759769 DOI: doi:10.1038/s41477-025-02056-z ]

EMD-51896
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3D View
Auxin transporter-like protein 3 LAX3 in the fully occluded state in complex with 2-naphthoxyacetic acid 2-NOA
CryoEM
Release date: Aug. 13, 2025
Resolution: 2.88 Å
EM Method: Single-particle
Fitted PDBs: 9h63
Q-score: 0.542
Similar entry percentile: 69%

Ung KL, Schulz L, Zuzic L, Amsinck BL, Koutnik-Abele S, Benhammouche I, Andersen CG, Nel L, Schiott B, Stokes DL, Hammes UZ, Pedersen BP

Nat Plants (2025) 11 pp. 1670-1680 [ Pubmed: 40759769 DOI: doi:10.1038/s41477-025-02056-z ]

EMD-53308
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3D View
Auxin transporter-like protein 3 LAX3 in the inward open state, apo
CryoEM
Release date: Aug. 13, 2025
Resolution: 3.16 Å
EM Method: Single-particle
Fitted PDBs: 9qqm
Q-score: 0.517
Similar entry percentile: 70%

Ung KL, Schulz L, Zuzic L, Amsinck BL, Koutnik-Abele S, Benhammouche I, Andersen CG, Nel L, Schiott B, Stokes DL, Hammes UZ, Pedersen BP

Nat Plants (2025) 11 pp. 1670-1680 [ Pubmed: 40759769 DOI: doi:10.1038/s41477-025-02056-z ]

EMD-53371
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Cryo-EM structure of the inward-open choline-bound state of choline/ethanolamine transporter FLVCR2
CryoEM
Release date: June 11, 2025
Resolution: 3.39 Å
EM Method: Single-particle
Fitted PDBs: 9qu4
Q-score: 0.492
Similar entry percentile: 69%

Nel L, Driller JH, Driller R, Frain KM, Pedersen BP

Life Sci Alliance (2026) 9 [ DOI: doi:10.26508/lsa.202503583 Pubmed: 42114998 ]

Sort by: Download
Showing 1 - 10 of 40. Page 1 of 4
Display:
Statistics
×

Download


Preview 10 entries View All Download file

Filter By

Current Database

  • EMDB [40]

Current status

  • REL [40]

Sample type

  • Protein [40]
  • Complex [36]
  • Ligand [26]
  • Cellular component [4]

Organism

  • Escherichia coli [17]
  • Arabidopsis thaliana [12]
  • Saccharomyces cerevisiae [5]
  • Escherichia coli [4]
  • Homo sapiens [3]

EM Method

  • Single-particle [40]

Resolution

  • ≥ 2Å and < 3Å [10]
  • ≥ 3Å and < 4Å [29]
  • ≥ 6Å and < 8Å [1]

Model molecular weight

  • 0-50 kDa [4]
  • 50-100 kDa [8]
  • 100-250 kDa [15]

Release Date

  • 2026 [5]
  • 2025 [10]
  • 2024 [2]
  • 2023 [4]
  • 2022 [4]
  • 2021 [14]
  • 2019 [1]

Author by name

  • Pedersen BP [40]
  • Stokes DL [36]
  • Zhang X [20]
  • Larsen C [14]
  • Schlame M [14]
  • Sweet ME [14]
  • Hammes UZ [12]
  • Schulz L [12]
  • Ung KL [12]
  • Nel L [10]
  • Dedic E [8]
  • Koutnik-abele S [8]
  • Frain KM [6]
  • Hussein AK [6]
  • Thaysen K [5]
  • Winkler MBL [5]
  • Wustner D [5]
  • Amsinck BL [4]
  • Andersen CG [4]
  • Benhammouche I [4]
  • Bohush A [4]
  • Janacek DP [4]
  • Kolb M [4]
  • Olesen E [4]
  • Panyella Pedersen B [4]
  • Schiott B [4]
  • Stokes D [4]
  • Winkler M [4]
  • Zuzic L [4]
  • Driller JH [3]
  • Driller R [2]
  • Hussein A [1]
  • Kidmose RT [1]
  • Muench SP [1]
  • Rawson S [1]
  • Szomek M [1]

Author by ORCID

  • Pedersen BP [38]
  • Stokes DL [35]
  • Hammes UZ [12]
  • Ung KL [12]
  • Nel L [10]
  • Dedic E [8]
  • Schulz L [8]
  • Koutnik-abele S [8]
  • Zhang X [5]
  • Hussein AK [5]
  • Wustner D [5]
  • Kolb M [4]
  • Schiott B [4]
  • Thaysen K [4]
  • Bohush A [4]
  • Zuzic L [4]
  • Frain KM [4]
  • Amsinck BL [4]
  • Driller JH [3]
  • Rawson S [1]
  • Szomek M [1]
  • Winkler MBL [1]

Journal

  • PNAS [18]
  • NAT PLANTS [8]
  • TO BE PUBLISHED [6]
  • BIORXIV [5]
  • NATURE [4]
  • LIFE SCI ALLIANCE [2]
  • CELL [1]

Software

  • CRYOSPARC [35]
  • RELION [4]
  • COOT [2]

Microscope

  • FEI TITAN KRIOS [29]
  • TFS KRIOS [11]

Electron Source

  • FIELD EMISSION GUN [40]

Film or detector model

  • GATAN K3 BIOQUANTUM 6K X 4K [18]
  • GATAN K3 6K X 4K [12]
  • FEI FALCON IV 4K X 4K [6]
  • GATAN K2 QUANTUM 4K X 4K [3]
  • GATAN K2 SUMMIT 4K X 4K [1]

External links

  • PDB [40]
  • AlphaFold DB [39]
  • PDBe-Kb [39]
  • UniProt [39]
  • InterPro [27]
  • Pfam [27]
  • ChEBI [26]
  • ChEMBL [26]
  • DrugBank [26]
  • Gene Ontology [26]
  • Complex Portal [20]