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author:"Oyen D"

Filter By

Current Database

  • EMDB [85]

Current status

  • REL [85]

Sample type

  • Complex [85]
  • Protein [13]
  • Ligand [4]
  • Cellular component [3]

Organism

  • Macaca mulatta [40]
  • Homo sapiens [27]
  • Plasmodium falciparum [23]
  • Human immunodeficiency virus [10]
  • Oryctolagus cuniculus [10]
  • Human immunodeficiency virus 1 [4]
  • Plasmodium falciparum [3]
  • Escherichia coli [1]

EM Method

  • Single-particle [85]

Resolution

  • ≥ 2Å and < 3Å [1]
  • ≥ 3Å and < 4Å [9]
  • ≥ 4Å and < 5Å [9]
  • ≥ 12Å and < 16Å [7]
  • ≥ 16Å and < 20Å [19]
  • ≥ 20Å and < 30Å [37]
  • ≥ 30Å [3]

Model molecular weight

  • 250-500 kDa [8]
  • 500-1000 kDa [5]

Release Date

  • 2023 [7]
  • 2020 [51]
  • 2019 [6]
  • 2018 [19]
  • 2017 [2]

Author by name

  • Oyen D [85]
  • Ward AB [85]
  • Wilson IA [85]
  • Cottrell CA [65]
  • Torres JL [65]
  • Burton DR [60]
  • Nogal B [60]
  • Copps J [47]
  • Bowman CA [40]
  • Carnathan DG [40]
  • Christley S [40]
  • Gross J [40]
  • Labranche C [40]
  • Montefiori D [40]
  • Moore JP [40]
  • Morpurgo R [40]
  • Ozorowski G [40]
  • Patel R [40]
  • Rakasz EG [40]
  • Sanders RW [40]
  • Sather DN [40]
  • Sewall LM [40]
  • Shin M [40]
  • Silvestri G [40]
  • Sok D [40]
  • Vigdorovich V [40]
  • Yuan M [40]
  • Van Breemen M [40]
  • Van Gils Mj [40]
  • Van Schooten J [40]
  • Van Der Woude P [40]
  • Bastidas R [20]
  • Bianchi M [20]
  • Emerling D [20]
  • Flores-garcia Y [20]
  • Hangartner L [20]
  • King CR [20]
  • Mccoy LE [20]
  • Nedellec R [20]
  • Pauthner M [20]
  • Turner HL [20]
  • Zavala F [20]
  • Locke E [18]
  • Pholcharee T [18]
  • Martin GM [16]
  • Volkmuth W [11]
  • Gonzalez-paez GE [9]
  • Beutler N [7]
  • Gibson G [7]
  • Gonzalez-paez G [7]
  • Jung DD [7]
  • Lee WH [7]
  • Macgill RS [7]
  • Moskovitz R [7]
  • Richter King C [5]
  • Aoto PC [2]
  • Binter S [2]
  • Bradley A [2]
  • Carroll S [2]
  • Cottrell C [2]
  • Glanville J [2]
  • Kellam P [2]
  • Lemiale F [2]
  • Liang Q [2]
  • Ockenhouse CF [2]
  • Reponen S [2]
  • Wash R [2]
  • Wille-reece U [2]

Author by ORCID

  • Cottrell CA [65]
  • Torres JL [65]
  • Ward AB [54]
  • Copps J [47]
  • Gross J [40]
  • Bowman CA [40]
  • Silvestri G [40]
  • Burton DR [40]
  • Morpurgo R [40]
  • Nogal B [40]
  • Yuan M [40]
  • Shin M [40]
  • Sewall LM [40]
  • Sanders RW [40]
  • Van Schooten J [40]
  • Labranche C [40]
  • Sather DN [40]
  • Sok D [40]
  • Ozorowski G [40]
  • Montefiori D [40]
  • Van Gils Mj [40]
  • Vigdorovich V [40]
  • Carnathan DG [40]
  • Pauthner M [20]
  • Mccoy LE [20]
  • Bianchi M [20]
  • Pholcharee T [18]
  • Wilson IA [14]
  • Gonzalez-paez GE [9]
  • Lee WH [7]
  • Zavala F [7]
  • Macgill RS [7]
  • Emerling D [7]
  • Beutler N [7]
  • Gonzalez-paez G [7]
  • Gibson G [7]
  • Aoto PC [2]
  • Bradley A [2]
  • Locke E [2]
  • Binter S [2]
  • Kellam P [2]

Journal

  • PLOS PATHOG [42]
  • BIORXIV [40]
  • IMMUNITY [20]
  • J MOL BIOL [9]
  • NAT COMMUN [7]
  • SCI ADV [5]
  • PNAS [2]

Software

  • RELION [63]
  • CRYOSPARC [24]
  • CTFFIND [11]
  • EMAN [2]
  • GCTF [2]

Microscope

  • FEI TALOS ARCTICA [41]
  • FEI TECNAI SPIRIT [31]
  • FEI TECNAI ARCTICA [8]
  • FEI TITAN KRIOS [5]

Electron Source

  • FIELD EMISSION GUN [54]
  • LAB6 [31]

Film or detector model

  • FEI CETA 4K X 4K [34]
  • TVIPS TEMCAM-F416 4K X 4K [31]
  • GATAN K2 SUMMIT 4K X 4K [20]

External links

  • PDB [85]
  • UniProt [13]
  • InterPro [12]
  • PDBe-Kb [12]
  • Gene Ontology [11]
  • AlphaFold DB [10]
  • Pfam [8]
  • Complex Portal [5]
  • ChEBI [4]
  • ChEMBL [4]
Sort by: Download
Showing 1 - 10 of 85. Page 1 of 9
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Preview first 10
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EMD-27781
Download Map
3D View
Cryo-EM structure of 227 Fab in complex with NPNA 8 peptide
CryoEM
Release date: Aug. 2, 2023
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 8dyt
Q-score: 0.55

Martin GM, Torres JL, Pholcharee T, Oyen D, Flores-Garcia Y, Gibson G, Moskovitz R, Beutler N, Jung DD, Copps J, Lee WH, Gonzalez-Paez G, Emerling D, MacGill RS, Locke E, King CR, Zavala F, Wilson IA, Ward AB

Nat Commun (2023) 14 pp. 4546-4546 [ Pubmed: 37507365 DOI: doi:10.1038/s41467-023-40151-x ]

EMD-27784
Download Map
3D View
Cryo-EM structure of 239 Fab in complex with recombinant shortened Plasmodium falciparum circumsporozoite protein rsCSP
CryoEM
Release date: Aug. 2, 2023
Resolution: 3.72 Å
EM Method: Single-particle
Fitted PDBs: 8dyw
Q-score: 0.424

Martin GM, Torres JL, Pholcharee T, Oyen D, Flores-Garcia Y, Gibson G, Moskovitz R, Beutler N, Jung DD, Copps J, Lee WH, Gonzalez-Paez G, Emerling D, MacGill RS, Locke E, King CR, Zavala F, Wilson IA, Ward AB

Nat Commun (2023) 14 pp. 4546-4546 [ Pubmed: 37507365 DOI: doi:10.1038/s41467-023-40151-x ]

EMD-27785
Download Map
3D View
Cryo-EM structure of 311 Fab in complex with recombinant shortened Plasmodium falciparum circumsporozoite protein rsCSP
CryoEM
Release date: Aug. 2, 2023
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 8dyx
Q-score: 0.514

Martin GM, Torres JL, Pholcharee T, Oyen D, Flores-Garcia Y, Gibson G, Moskovitz R, Beutler N, Jung DD, Copps J, Lee WH, Gonzalez-Paez G, Emerling D, MacGill RS, Locke E, King CR, Zavala F, Wilson IA, Ward AB

Nat Commun (2023) 14 pp. 4546-4546 [ Pubmed: 37507365 DOI: doi:10.1038/s41467-023-40151-x ]

EMD-27786
Download Map
3D View
Cryo-EM structure of 334 Fab in complex with recombinant shortened Plasmodium falciparum circumsporozoite protein rsCSP
CryoEM
Release date: Aug. 2, 2023
Resolution: 3.62 Å
EM Method: Single-particle
Fitted PDBs: 8dyy
Q-score: 0.505

Martin GM, Torres JL, Pholcharee T, Oyen D, Flores-Garcia Y, Gibson G, Moskovitz R, Beutler N, Jung DD, Copps J, Lee WH, Gonzalez-Paez G, Emerling D, MacGill RS, Locke E, King CR, Zavala F, Wilson IA, Ward AB

Nat Commun (2023) 14 pp. 4546-4546 [ Pubmed: 37507365 DOI: doi:10.1038/s41467-023-40151-x ]

EMD-27787
Download Map
3D View
Cryo-EM structure of 337 Fab in complex with recombinant shortened Plasmodium falciparum circumsporozoite protein rsCSP
CryoEM
Release date: Aug. 2, 2023
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 8dz3
Q-score: 0.579

Martin GM, Torres JL, Pholcharee T, Oyen D, Flores-Garcia Y, Gibson G, Moskovitz R, Beutler N, Jung DD, Copps J, Lee WH, Gonzalez-Paez G, Emerling D, MacGill RS, Locke E, King CR, Zavala F, Wilson IA, Ward AB

Nat Commun (2023) 14 pp. 4546-4546 [ Pubmed: 37507365 DOI: doi:10.1038/s41467-023-40151-x ]

EMD-27788
Download Map
3D View
Cryo-EM structure of 356 Fab in complex with recombinant shortened Plasmodium falciparum circumsporozoite protein rsCSP
CryoEM
Release date: Aug. 2, 2023
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8dz4
Q-score: 0.523

Martin GM, Torres JL, Pholcharee T, Oyen D, Flores-Garcia Y, Gibson G, Moskovitz R, Beutler N, Jung DD, Copps J, Lee WH, Gonzalez-Paez G, Emerling D, MacGill RS, Locke E, King CR, Zavala F, Wilson IA, Ward AB

Nat Commun (2023) 14 pp. 4546-4546 [ Pubmed: 37507365 DOI: doi:10.1038/s41467-023-40151-x ]

EMD-27789
Download Map
3D View
Cryo-EM structure of 364 Fab in complex with recombinant shortened Plasmodium falciparum circumsporozoite protein rsCSP
CryoEM
Release date: Aug. 2, 2023
Resolution: 3.84 Å
EM Method: Single-particle
Fitted PDBs: 8dz5
Q-score: 0.45

Martin GM, Torres JL, Pholcharee T, Oyen D, Flores-Garcia Y, Gibson G, Moskovitz R, Beutler N, Jung DD, Copps J, Lee WH, Gonzalez-Paez G, Emerling D, MacGill RS, Locke E, King CR, Zavala F, Wilson IA, Ward AB

Nat Commun (2023) 14 pp. 4546-4546 [ Pubmed: 37507365 DOI: doi:10.1038/s41467-023-40151-x ]

EMD-21061
Download Map
3D View
RM19M Fab in complex with BG505 SOSIPv5.2
Negative staining
Release date: Aug. 19, 2020
Resolution: 18.0 Å
EM Method: Single-particle

Cottrell CA, van Schooten J, Bowman CA, Yuan M, Oyen D, Shin M, Morpurgo R, van der Woude P, van Breemen M, Torres JL, Patel R, Gross J, Sewall LM, Copps J, Ozorowski G, Nogal B, Sok D, Rakasz EG, Labranche C, Vigdorovich V, Christley S, Carnathan DG, Sather DN, Montefiori D, Silvestri G, Burton DR, Moore JP, Wilson IA, Sanders RW, Ward AB, van Gils MJ

PLoS Pathog (2020) 16 pp. e1008753-e1008753 [ DOI: doi:10.1371/journal.ppat.1008753 Pubmed: 32866207 ]

EMD-21062
Download Map
3D View
RM19A1 Fab in complex with BG505 SOSIPv5.2
Negative staining
Release date: Aug. 19, 2020
Resolution: 22.0 Å
EM Method: Single-particle

Cottrell CA, van Schooten J, Bowman CA, Yuan M, Oyen D, Shin M, Morpurgo R, van der Woude P, van Breemen M, Torres JL, Patel R, Gross J, Sewall LM, Copps J, Ozorowski G, Nogal B, Sok D, Rakasz EG, Labranche C, Vigdorovich V, Christley S, Carnathan DG, Sather DN, Montefiori D, Silvestri G, Burton DR, Moore JP, Wilson IA, Sanders RW, Ward AB, van Gils MJ

PLoS Pathog (2020) 16 pp. e1008753-e1008753 [ DOI: doi:10.1371/journal.ppat.1008753 Pubmed: 32866207 ]

EMD-21064
Download Map
3D View
RM19P Fab in complex with BG505 SOSIPv5.2
Negative staining
Release date: Aug. 19, 2020
Resolution: 18.0 Å
EM Method: Single-particle

Cottrell CA, van Schooten J, Bowman CA, Yuan M, Oyen D, Shin M, Morpurgo R, van der Woude P, van Breemen M, Torres JL, Patel R, Gross J, Sewall LM, Copps J, Ozorowski G, Nogal B, Sok D, Rakasz EG, Labranche C, Vigdorovich V, Christley S, Carnathan DG, Sather DN, Montefiori D, Silvestri G, Burton DR, Moore JP, Wilson IA, Sanders RW, Ward AB, van Gils MJ

PLoS Pathog (2020) 16 pp. e1008753-e1008753 [ DOI: doi:10.1371/journal.ppat.1008753 Pubmed: 32866207 ]

Sort by: Download
Showing 1 - 10 of 85. Page 1 of 9
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [85]

Current status

  • REL [85]

Sample type

  • Complex [85]
  • Protein [13]
  • Ligand [4]
  • Cellular component [3]

Organism

  • Macaca mulatta [40]
  • Homo sapiens [27]
  • Plasmodium falciparum [23]
  • Human immunodeficiency virus [10]
  • Oryctolagus cuniculus [10]
  • Human immunodeficiency virus 1 [4]
  • Plasmodium falciparum [3]
  • Escherichia coli [1]

EM Method

  • Single-particle [85]

Resolution

  • ≥ 2Å and < 3Å [1]
  • ≥ 3Å and < 4Å [9]
  • ≥ 4Å and < 5Å [9]
  • ≥ 12Å and < 16Å [7]
  • ≥ 16Å and < 20Å [19]
  • ≥ 20Å and < 30Å [37]
  • ≥ 30Å [3]

Model molecular weight

  • 250-500 kDa [8]
  • 500-1000 kDa [5]

Release Date

  • 2023 [7]
  • 2020 [51]
  • 2019 [6]
  • 2018 [19]
  • 2017 [2]

Author by name

  • Oyen D [85]
  • Ward AB [85]
  • Wilson IA [85]
  • Cottrell CA [65]
  • Torres JL [65]
  • Burton DR [60]
  • Nogal B [60]
  • Copps J [47]
  • Bowman CA [40]
  • Carnathan DG [40]
  • Christley S [40]
  • Gross J [40]
  • Labranche C [40]
  • Montefiori D [40]
  • Moore JP [40]
  • Morpurgo R [40]
  • Ozorowski G [40]
  • Patel R [40]
  • Rakasz EG [40]
  • Sanders RW [40]
  • Sather DN [40]
  • Sewall LM [40]
  • Shin M [40]
  • Silvestri G [40]
  • Sok D [40]
  • Vigdorovich V [40]
  • Yuan M [40]
  • Van Breemen M [40]
  • Van Gils Mj [40]
  • Van Schooten J [40]
  • Van Der Woude P [40]
  • Bastidas R [20]
  • Bianchi M [20]
  • Emerling D [20]
  • Flores-garcia Y [20]
  • Hangartner L [20]
  • King CR [20]
  • Mccoy LE [20]
  • Nedellec R [20]
  • Pauthner M [20]
  • Turner HL [20]
  • Zavala F [20]
  • Locke E [18]
  • Pholcharee T [18]
  • Martin GM [16]
  • Volkmuth W [11]
  • Gonzalez-paez GE [9]
  • Beutler N [7]
  • Gibson G [7]
  • Gonzalez-paez G [7]
  • Jung DD [7]
  • Lee WH [7]
  • Macgill RS [7]
  • Moskovitz R [7]
  • Richter King C [5]
  • Aoto PC [2]
  • Binter S [2]
  • Bradley A [2]
  • Carroll S [2]
  • Cottrell C [2]
  • Glanville J [2]
  • Kellam P [2]
  • Lemiale F [2]
  • Liang Q [2]
  • Ockenhouse CF [2]
  • Reponen S [2]
  • Wash R [2]
  • Wille-reece U [2]

Author by ORCID

  • Cottrell CA [65]
  • Torres JL [65]
  • Ward AB [54]
  • Copps J [47]
  • Gross J [40]
  • Bowman CA [40]
  • Silvestri G [40]
  • Burton DR [40]
  • Morpurgo R [40]
  • Nogal B [40]
  • Yuan M [40]
  • Shin M [40]
  • Sewall LM [40]
  • Sanders RW [40]
  • Van Schooten J [40]
  • Labranche C [40]
  • Sather DN [40]
  • Sok D [40]
  • Ozorowski G [40]
  • Montefiori D [40]
  • Van Gils Mj [40]
  • Vigdorovich V [40]
  • Carnathan DG [40]
  • Pauthner M [20]
  • Mccoy LE [20]
  • Bianchi M [20]
  • Pholcharee T [18]
  • Wilson IA [14]
  • Gonzalez-paez GE [9]
  • Lee WH [7]
  • Zavala F [7]
  • Macgill RS [7]
  • Emerling D [7]
  • Beutler N [7]
  • Gonzalez-paez G [7]
  • Gibson G [7]
  • Aoto PC [2]
  • Bradley A [2]
  • Locke E [2]
  • Binter S [2]
  • Kellam P [2]

Journal

  • PLOS PATHOG [42]
  • BIORXIV [40]
  • IMMUNITY [20]
  • J MOL BIOL [9]
  • NAT COMMUN [7]
  • SCI ADV [5]
  • PNAS [2]

Software

  • RELION [63]
  • CRYOSPARC [24]
  • CTFFIND [11]
  • EMAN [2]
  • GCTF [2]

Microscope

  • FEI TALOS ARCTICA [41]
  • FEI TECNAI SPIRIT [31]
  • FEI TECNAI ARCTICA [8]
  • FEI TITAN KRIOS [5]

Electron Source

  • FIELD EMISSION GUN [54]
  • LAB6 [31]

Film or detector model

  • FEI CETA 4K X 4K [34]
  • TVIPS TEMCAM-F416 4K X 4K [31]
  • GATAN K2 SUMMIT 4K X 4K [20]

External links

  • PDB [85]
  • UniProt [13]
  • InterPro [12]
  • PDBe-Kb [12]
  • Gene Ontology [11]
  • AlphaFold DB [10]
  • Pfam [8]
  • Complex Portal [5]
  • ChEBI [4]
  • ChEMBL [4]