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author:"Nishino K"

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Current Database

  • EMDB [13]
  • EMPIAR [1]

Current status

  • REL [14]

Sample type

  • Complex [13]
  • Protein [13]
  • Ligand [6]

Organism

  • Streptococcus thermophilus [8]
  • Pseudomonas aeruginosa [4]
  • Homo sapiens [1]
  • Oryctolagus cuniculus [1]

EM Method

  • Single-particle [13]

Resolution

  • ≥ 2Å and < 3Å [2]
  • ≥ 3Å and < 4Å [9]
  • ≥ 4Å and < 5Å [1]
  • ≥ 5Å and < 6Å [1]

Model molecular weight

  • 100-250 kDa [9]

Release Date

  • 2026 [12]
  • 2022 [1]
  • 2021 [1]

Author by name

  • Nishino K [13]
  • Fujita J [8]
  • Namba K [8]
  • Taguchi A [8]
  • Nakagawa A [5]
  • Hirose M [4]
  • Kato T [4]
  • Nakashima R [4]
  • Tsutsumi K [4]
  • Wang J [4]
  • Yamashita E [4]
  • Kikkawa M [2]
  • Nagata S [2]
  • Sakuragi T [2]
  • Tsutsumi A [2]
  • Baba T [1]
  • Fukuzawa K [1]
  • Harada K [1]
  • Kanai R [1]
  • Kosako H [1]
  • Miyazaki T [1]
  • Moriya T [1]
  • Narita H [1]
  • Onishi E [1]
  • Takaya D [1]
  • Tanabe M [1]
  • Toyoshima C [1]

Author by ORCID

  • Fujita J [7]
  • Namba K [7]
  • Nishino K [7]
  • Taguchi A [7]
  • Nakagawa A [5]
  • Hirose M [4]
  • Tsutsumi K [4]
  • Yamashita E [4]
  • Kato T [4]
  • Wang J [4]
  • Kikkawa M [1]
  • Toyoshima C [1]
  • Nagata S [1]
  • Sakuragi T [1]
  • Tsutsumi A [1]

Journal

  • TO BE PUBLISHED [8]
  • ACTA CRYSTALLOGR F STRUCT BIOL COMMUN [4]
  • NAT STRUCT MOL BIOL [2]

Software

  • CRYOSPARC [11]
  • RELION [1]

Microscope

  • JEOL CRYO ARM 300 [7]
  • TFS KRIOS [5]
  • FEI TITAN KRIOS [1]

Electron Source

  • FIELD EMISSION GUN [13]

Film or detector model

  • GATAN K3 6K X 4K [9]
  • FEI FALCON III 4K X 4K [4]

EMPIAR Experiment type

  • EMDB [1]

EMPIAR Image category

  • MICROGRAPHS - MULTIFRAME [1]

External links

  • PDB [13]
  • AlphaFold DB [9]
  • Gene Ontology [9]
  • Pfam [9]
  • UniProt [9]
  • ChEBI [6]
  • DrugBank [6]
  • ChEMBL [5]
  • EMDB [1]
  • EMPIAR [1]
  • InterPro [1]
  • PDBe-Kb [1]
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Showing 1 - 10 of 14. Page 1 of 2
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EMD-66531
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Cryo-EM structure of Streptococcus thermophilus FoeAB in complex with ADP
CryoEM
Release date: June 3, 2026
Resolution: 3.25 Å
EM Method: Single-particle
Fitted PDBs: 9x46
Q-score: 0.508

Taguchi A, Fujita J, Namba K, Nishino K

To Be Published

EMD-66532
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Cryo-EM structure of nucleotide-free Streptococcus thermophilus FoeAB 1
CryoEM
Release date: June 3, 2026
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 9x47
Q-score: 0.511

Taguchi A, Fujita J, Namba K, Nishino K

To Be Published

EMD-66533
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Cryo-EM structure of nucleotide-free Streptococcus thermophilus FoeAB 2
CryoEM
Release date: June 3, 2026
Resolution: 3.26 Å
EM Method: Single-particle
Fitted PDBs: 9x48
Q-score: 0.485

Taguchi A, Fujita J, Namba K, Nishino K

To Be Published

EMD-66534
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Cryo-EM structure of nucleotide-free Streptococcus thermophilus FoeAB 3
CryoEM
Release date: June 3, 2026
Resolution: 3.34 Å
EM Method: Single-particle
Fitted PDBs: 9x49
Q-score: 0.493

Taguchi A, Fujita J, Namba K, Nishino K

To Be Published

EMD-66535
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Cryo-EM structure of Streptococcus thermophilus FoeAB E504Q mutant in complex with ATP
CryoEM
Release date: June 3, 2026
Resolution: 3.16 Å
EM Method: Single-particle
Fitted PDBs: 9x4a
Q-score: 0.514

Taguchi A, Fujita J, Namba K, Nishino K

To Be Published

EMD-66536
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3D View
Cryo-EM structure of Streptococcus thermophilus FoeAB in complex with ATP and ADP
CryoEM
Release date: June 3, 2026
Resolution: 2.84 Å
EM Method: Single-particle
Fitted PDBs: 9x4b
Q-score: 0.558

Taguchi A, Fujita J, Namba K, Nishino K

To Be Published

EMD-66537
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Cryo-EM structure of Streptococcus thermophilus FoeAB in complex with AMPPNP in peptidisc
CryoEM
Release date: June 3, 2026
Resolution: 3.08 Å
EM Method: Single-particle
Fitted PDBs: 9x4c
Q-score: 0.535

Taguchi A, Fujita J, Namba K, Nishino K

To Be Published

EMD-66953
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3D View
Cryo-EM structure of Streptococcus thermophilus FoeAB in complex with AMPPNP
CryoEM
Release date: June 3, 2026
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 9xka
Q-score: 0.592

Taguchi A, Fujita J, Tanabe M, Takaya D, Harada K, Moriya T, Fukuzawa K, Namba K, Nishino K

To Be Published

EMD-67812
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3D View
MexBYB-Ka asymmetry
CryoEM
Release date: March 11, 2026
Resolution: 3.6 Å
EM Method: Single-particle

Wang J, Tsutsumi K, Hirose M, Nakashima R, Kato T, Nishino K, Nakagawa A, Yamashita E

Acta Crystallogr F Struct Biol Commun (2026) 82 pp. 83-93 [ DOI: doi:10.1107/S2053230X26001202 Pubmed: 41744473 ]

EMD-67813
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MexBYB-Ka symmetry-like
CryoEM
Release date: March 11, 2026
Resolution: 3.55 Å
EM Method: Single-particle

Wang J, Tsutsumi K, Hirose M, Nakashima R, Kato T, Nishino K, Nakagawa A, Yamashita E

Acta Crystallogr F Struct Biol Commun (2026) 82 pp. 83-93 [ DOI: doi:10.1107/S2053230X26001202 Pubmed: 41744473 ]

Sort by: Download
Showing 1 - 10 of 14. Page 1 of 2
Display:
Statistics
×

Download












































Preview first 10
Download

Filter By

Current Database

  • EMDB [13]
  • EMPIAR [1]

Current status

  • REL [14]

Sample type

  • Complex [13]
  • Protein [13]
  • Ligand [6]

Organism

  • Streptococcus thermophilus [8]
  • Pseudomonas aeruginosa [4]
  • Homo sapiens [1]
  • Oryctolagus cuniculus [1]

EM Method

  • Single-particle [13]

Resolution

  • ≥ 2Å and < 3Å [2]
  • ≥ 3Å and < 4Å [9]
  • ≥ 4Å and < 5Å [1]
  • ≥ 5Å and < 6Å [1]

Model molecular weight

  • 100-250 kDa [9]

Release Date

  • 2026 [12]
  • 2022 [1]
  • 2021 [1]

Author by name

  • Nishino K [13]
  • Fujita J [8]
  • Namba K [8]
  • Taguchi A [8]
  • Nakagawa A [5]
  • Hirose M [4]
  • Kato T [4]
  • Nakashima R [4]
  • Tsutsumi K [4]
  • Wang J [4]
  • Yamashita E [4]
  • Kikkawa M [2]
  • Nagata S [2]
  • Sakuragi T [2]
  • Tsutsumi A [2]
  • Baba T [1]
  • Fukuzawa K [1]
  • Harada K [1]
  • Kanai R [1]
  • Kosako H [1]
  • Miyazaki T [1]
  • Moriya T [1]
  • Narita H [1]
  • Onishi E [1]
  • Takaya D [1]
  • Tanabe M [1]
  • Toyoshima C [1]

Author by ORCID

  • Fujita J [7]
  • Namba K [7]
  • Nishino K [7]
  • Taguchi A [7]
  • Nakagawa A [5]
  • Hirose M [4]
  • Tsutsumi K [4]
  • Yamashita E [4]
  • Kato T [4]
  • Wang J [4]
  • Kikkawa M [1]
  • Toyoshima C [1]
  • Nagata S [1]
  • Sakuragi T [1]
  • Tsutsumi A [1]

Journal

  • TO BE PUBLISHED [8]
  • ACTA CRYSTALLOGR F STRUCT BIOL COMMUN [4]
  • NAT STRUCT MOL BIOL [2]

Software

  • CRYOSPARC [11]
  • RELION [1]

Microscope

  • JEOL CRYO ARM 300 [7]
  • TFS KRIOS [5]
  • FEI TITAN KRIOS [1]

Electron Source

  • FIELD EMISSION GUN [13]

Film or detector model

  • GATAN K3 6K X 4K [9]
  • FEI FALCON III 4K X 4K [4]

EMPIAR Experiment type

  • EMDB [1]

EMPIAR Image category

  • MICROGRAPHS - MULTIFRAME [1]

External links

  • PDB [13]
  • AlphaFold DB [9]
  • Gene Ontology [9]
  • Pfam [9]
  • UniProt [9]
  • ChEBI [6]
  • DrugBank [6]
  • ChEMBL [5]
  • EMDB [1]
  • EMPIAR [1]
  • InterPro [1]
  • PDBe-Kb [1]