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author:"Klima M"

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Current Database

  • EMDB [14]

Current status

  • REL [14]

Sample type

  • Complex [14]
  • Protein [14]
  • Ligand [9]
  • RNA [3]

Organism

  • Mycolicibacterium smegmatis [11]
  • Francisella tularensis [3]
  • (no species) [1]

EM Method

  • Single-particle [14]

Resolution

  • ≥ 2Å and < 3Å [8]
  • ≥ 3Å and < 4Å [6]

Model molecular weight

  • 100-250 kDa [1]
  • 250-500 kDa [10]
  • 2-5 MDa [3]

Release Date

  • 2026 [3]
  • 2025 [11]

Author by name

  • Klima M [14]
  • Dedola M [11]
  • Dolezal M [11]
  • Filimonenko A [11]
  • Knejzlik Z [11]
  • Kouba T [11]
  • Pichova I [11]
  • Svachova H [11]
  • Boura E [3]
  • Hercik K [3]
  • Pavlik P [3]
  • Silhan J [3]
  • Tomas K [1]

Author by ORCID

  • Kouba T [11]
  • Dolezal M [11]
  • Pichova I [11]
  • Knejzlik Z [11]
  • Klima M [11]
  • Dedola M [11]
  • Filimonenko A [11]
  • Svachova H [11]
  • Boura E [3]
  • Silhan J [3]

Journal

  • NAT COMMUN [11]
  • NUCLEIC ACIDS RES [3]

Software

  • RELION [11]
  • CRYOSPARC [3]
  • UCSF CHIMERAX [1]

Microscope

  • FEI TITAN KRIOS [7]
  • TFS KRIOS [3]
  • FEI TALOS ARCTICA [2]
  • FEI TECNAI ARCTICA [2]

Electron Source

  • FIELD EMISSION GUN [14]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [6]
  • GATAN K3 BIOQUANTUM 6K X 4K [5]
  • FEI FALCON IV 4K X 4K [3]

External links

  • AlphaFold DB [14]
  • PDB [14]
  • Pfam [14]
  • UniProt [14]
  • Gene Ontology [11]
  • InterPro [11]
  • PDBe-Kb [11]
  • ChEBI [9]
  • ChEMBL [9]
  • DrugBank [9]
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Showing 1 - 10 of 14. Page 1 of 2
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EMD-54782
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Cryo-EM structure of the 70S ribosome from Francisella tularensis bound to a hibernation-promoting factor
CryoEM
Release date: May 6, 2026
Resolution: 2.39 Å
EM Method: Single-particle
Fitted PDBs: 9sda
Q-score: 0.631

Klima M, Silhan J, Pavlik P, Hercik K, Boura E

Nucleic Acids Res (2026) 54 [ DOI: doi:10.1093/nar/gkag340 Pubmed: 42049235 ]

EMD-55615
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3D View
Cryo-EM structure of the 70S ribosome from Francisella tularensis bound to antibiotics chloramphenicol and gentamicin
CryoEM
Release date: May 6, 2026
Resolution: 2.4 Å
EM Method: Single-particle
Fitted PDBs: 9t6h
Q-score: 0.618

Klima M, Silhan J, Pavlik P, Hercik K, Boura E

Nucleic Acids Res (2026) 54 [ DOI: doi:10.1093/nar/gkag340 Pubmed: 42049235 ]

EMD-56659
Download Map
3D View
Cryo-EM structure of the 70S ribosome from Francisella tularensis
CryoEM
Release date: May 6, 2026
Resolution: 2.95 Å
EM Method: Single-particle
Fitted PDBs: 28nt
Q-score: 0.551

Klima M, Silhan J, Pavlik P, Hercik K, Boura E

Nucleic Acids Res (2026) 54 [ DOI: doi:10.1093/nar/gkag340 Pubmed: 42049235 ]

EMD-19583
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3D View
CryoEM structure of M. smegmatis GMP reductase in complex with GMP at pH 6.6, extended conformation.
CryoEM
Release date: Aug. 20, 2025
Resolution: 3.66 Å
EM Method: Single-particle
Fitted PDBs: 8ry0
Q-score: 0.434

Dolezal M, Knejzlik Z, Kouba T, Filimonenko A, Svachova H, Dedola M, Klima M, Pichova I

Nat Commun (2026) [ DOI: doi:10.1038/s41467-026-71657-9 Pubmed: 41974687 ]

EMD-19584
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3D View
CryoEM structure of M. smegmatis GMP reductase in complex with GMP at pH 6.6, compressed conformation.
CryoEM
Release date: Aug. 20, 2025
Resolution: 3.85 Å
EM Method: Single-particle
Fitted PDBs: 8ry1

Dolezal M, Knejzlik Z, Kouba T, Filimonenko A, Svachova H, Dedola M, Klima M, Pichova I

Nat Commun (2026) [ DOI: doi:10.1038/s41467-026-71657-9 Pubmed: 41974687 ]

EMD-19585
Download Map
3D View
CryoEM structure of M. smegmatis GMP reductase in complex with GMP and GTP at pH 6.6, extended conformation I.
CryoEM
Release date: Aug. 20, 2025
Resolution: 2.52 Å
EM Method: Single-particle
Fitted PDBs: 8ry3
Q-score: 0.571

Dolezal M, Knejzlik Z, Kouba T, Filimonenko A, Svachova H, Dedola M, Klima M, Pichova I

Nat Commun (2026) [ DOI: doi:10.1038/s41467-026-71657-9 Pubmed: 41974687 ]

EMD-19586
Download Map
3D View
CryoEM structure of M. smegmatis GMP reductase in complex with GMP and GTP at pH 6.6, extended conformation II.
CryoEM
Release date: Aug. 20, 2025
Resolution: 3.72 Å
EM Method: Single-particle
Fitted PDBs: 8ry4
Q-score: 0.374

Dolezal M, Knejzlik Z, Kouba T, Filimonenko A, Svachova H, Dedola M, Klima M, Pichova I

Nat Commun (2026) [ DOI: doi:10.1038/s41467-026-71657-9 Pubmed: 41974687 ]

EMD-19587
Download Map
3D View
CryoEM structure of M. smegmatis GMP reductase in complex with GMP and ATP at pH 6.6, compressed conformation.
CryoEM
Release date: Aug. 20, 2025
Resolution: 2.48 Å
EM Method: Single-particle
Fitted PDBs: 8ry5
Q-score: 0.62

Dolezal M, Knejzlik Z, Kouba T, Filimonenko A, Svachova H, Dedola M, Klima M, Pichova I

Nat Commun (2026) [ DOI: doi:10.1038/s41467-026-71657-9 Pubmed: 41974687 ]

EMD-19588
Download Map
3D View
CryoEM structure of M. smegmatis GMP reductase apoform at pH 6.6, extended conformation I.
CryoEM
Release date: Aug. 20, 2025
Resolution: 3.22 Å
EM Method: Single-particle
Fitted PDBs: 8ry6
Q-score: 0.477

Dolezal M, Knejzlik Z, Kouba T, Filimonenko A, Svachova H, Dedola M, Klima M, Pichova I

Nat Commun (2026) [ DOI: doi:10.1038/s41467-026-71657-9 Pubmed: 41974687 ]

EMD-19589
Download Map
3D View
CryoEM structure of M. smegmatis GMP reductase apoform at pH 6.6, extended conformation II.
CryoEM
Release date: Aug. 20, 2025
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 8ry7
Q-score: 0.329

Dolezal M, Knejzlik Z, Kouba T, Filimonenko A, Svachova H, Dedola M, Klima M, Pichova I

Nat Commun (2026) [ DOI: doi:10.1038/s41467-026-71657-9 Pubmed: 41974687 ]

Sort by: Download
Showing 1 - 10 of 14. Page 1 of 2
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [14]

Current status

  • REL [14]

Sample type

  • Complex [14]
  • Protein [14]
  • Ligand [9]
  • RNA [3]

Organism

  • Mycolicibacterium smegmatis [11]
  • Francisella tularensis [3]
  • (no species) [1]

EM Method

  • Single-particle [14]

Resolution

  • ≥ 2Å and < 3Å [8]
  • ≥ 3Å and < 4Å [6]

Model molecular weight

  • 100-250 kDa [1]
  • 250-500 kDa [10]
  • 2-5 MDa [3]

Release Date

  • 2026 [3]
  • 2025 [11]

Author by name

  • Klima M [14]
  • Dedola M [11]
  • Dolezal M [11]
  • Filimonenko A [11]
  • Knejzlik Z [11]
  • Kouba T [11]
  • Pichova I [11]
  • Svachova H [11]
  • Boura E [3]
  • Hercik K [3]
  • Pavlik P [3]
  • Silhan J [3]
  • Tomas K [1]

Author by ORCID

  • Kouba T [11]
  • Dolezal M [11]
  • Pichova I [11]
  • Knejzlik Z [11]
  • Klima M [11]
  • Dedola M [11]
  • Filimonenko A [11]
  • Svachova H [11]
  • Boura E [3]
  • Silhan J [3]

Journal

  • NAT COMMUN [11]
  • NUCLEIC ACIDS RES [3]

Software

  • RELION [11]
  • CRYOSPARC [3]
  • UCSF CHIMERAX [1]

Microscope

  • FEI TITAN KRIOS [7]
  • TFS KRIOS [3]
  • FEI TALOS ARCTICA [2]
  • FEI TECNAI ARCTICA [2]

Electron Source

  • FIELD EMISSION GUN [14]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [6]
  • GATAN K3 BIOQUANTUM 6K X 4K [5]
  • FEI FALCON IV 4K X 4K [3]

External links

  • AlphaFold DB [14]
  • PDB [14]
  • Pfam [14]
  • UniProt [14]
  • Gene Ontology [11]
  • InterPro [11]
  • PDBe-Kb [11]
  • ChEBI [9]
  • ChEMBL [9]
  • DrugBank [9]