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author:"Johnson JE"

Filter By

Current Database

  • EMDB [65]
  • EMPIAR [6]

Current status

  • REL [71]

Sample type

  • Sample [52]
  • Virus [40]
  • Protein [34]

Organism

  • Nudaurelia capensis omega virus [22]
  • Homo sapiens [19]
  • Human mastadenovirus d [14]
  • Salmonella phage p22 [11]
  • Sulfolobus turreted icosahedral virus 1 [3]
  • Enterobacteria phage hk97 [3]
  • Vibrio phage sio-2 [2]
  • Escherichia phage lambda [1]

EM Method

  • Single-particle [65]

Resolution

  • ≥ 2Å and < 3Å [1]
  • ≥ 3Å and < 4Å [5]
  • ≥ 4Å and < 5Å [3]
  • ≥ 5Å and < 6Å [1]
  • ≥ 6Å and < 8Å [4]
  • ≥ 8Å and < 12Å [13]
  • ≥ 12Å and < 16Å [4]
  • ≥ 16Å and < 20Å [1]
  • ≥ 20Å and < 30Å [6]
  • ≥ 30Å [20]

Model molecular weight

  • > 10 MDa [11]

Release Date

  • 2023 [4]
  • 2022 [9]
  • 2021 [2]
  • 2019 [1]
  • 2018 [3]
  • 2015 [1]
  • 2014 [22]
  • 2013 [9]
  • 2012 [7]
  • 2011 [3]
  • 2010 [3]
  • 2009 [5]
  • 2006 [1]
  • 2005 [1]

Author by name

  • Johnson JE [71]
  • Veesler D [24]
  • Burger M [19]
  • Cupelli K [19]
  • Graber P [19]
  • Stehle T [19]
  • Castells-graells R [15]
  • Hesketh EL [15]
  • Lander GC [15]
  • Lawson DM [15]
  • Lomonossoff GP [15]
  • Ranson NA [15]
  • Domitrovic T [12]
  • Matsui T [12]
  • Khayat R [11]
  • Carragher B [10]
  • Potter CS [10]
  • Baker TS [9]
  • Doerschuk PC [8]
  • Wang Q [8]
  • Zheng Y [8]
  • Li R [6]
  • Cingolani G [5]
  • Casjens SR [4]
  • Gilcrease EB [4]
  • Lander G [4]
  • Mcnulty R [4]
  • Prevelige P [4]
  • Prevelige PE [4]
  • Ribeiro JRS [4]
  • Scarff CA [4]
  • Tang J [4]
  • Cardone G [3]
  • Casjens S [3]
  • Olia A [3]
  • Olia AS [3]
  • Tang L [3]
  • Anand GS [2]
  • Azam F [2]
  • Baudoux AC [2]
  • Cortines JR [2]
  • Evilevitch A [2]
  • Fu CY [2]
  • Heck AJR [2]
  • Huang RK [2]
  • Jeembaeva M [2]
  • Krishnamurthy S [2]
  • Parent KN [2]
  • Snijder J [2]
  • Suhanovsky MM [2]
  • Teschke CM [2]
  • Tu LH [2]
  • Bothner B [1]
  • Campbell MG [1]
  • Cheng A [1]
  • Coritnes JR [1]
  • Douglas T [1]
  • Eilers BJ [1]
  • Gillitzer E [1]
  • Grigorieff N [1]
  • Heck AJ [1]
  • Lawrence CM [1]
  • Lee KK [1]
  • Lok SM [1]
  • Lokareddy RK [1]
  • Marion WR [1]
  • Murez Z [1]
  • Ng TS [1]
  • Poliakov A [1]
  • Quispe J [1]
  • Rice G [1]
  • Roberto F [1]
  • Roy A [1]
  • Sendamarai AK [1]
  • Spuhler J [1]
  • Stedman K [1]
  • Yang Y [1]
  • Yeager M [1]
  • Young M [1]
  • Young MJ [1]

Author by ORCID

  • Lander GC [15]
  • Matsui T [12]
  • Carragher B [10]
  • Ranson NA [9]
  • Castells-graells R [9]
  • Hesketh EL [9]
  • Lawson DM [9]
  • Lomonossoff GP [9]
  • Domitrovic T [8]
  • Baker TS [6]
  • Johnson JE [5]
  • Mcnulty R [4]
  • Cingolani G [3]
  • Li R [3]
  • Cardone G [3]
  • Krishnamurthy S [2]
  • Scarff CA [2]
  • Evilevitch A [2]
  • Heck AJR [2]
  • Cortines JR [2]
  • Sendamarai AK [1]
  • Casjens SR [1]
  • Grigorieff N [1]
  • Heck AJ [1]
  • Quispe J [1]
  • Lawrence CM [1]
  • Campbell MG [1]
  • Lok SM [1]
  • Lander G [1]

Journal

  • PNAS [25]
  • STRUCTURE [15]
  • J STRUCT BIOL [9]
  • TO BE PUBLISHED [7]
  • COMMUN BIOL [4]
  • BIOPHYS J [3]
  • J MOL BIOL [2]
  • EMBO J [1]
  • SCIENCE [1]

Software

  • SPIDER [20]
  • RELION [10]
  • FREALIGN [7]
  • EMAN [6]
  • AUTO3DEM [5]
  • EMAN, SPIDER [3]
  • CHIMERA [2]
  • EMAN AND FREALIGN [2]
  • EMAN2 [2]
  • CNS [1]
  • COLORES [1]
  • SPIDER, EMAN [1]
  • UCSF CHIMERA [1]

Microscope

  • FEI TECNAI F20 [30]
  • FEI TECNAI 12 [15]
  • FEI TITAN KRIOS [10]
  • FEI TALOS ARCTICA [3]
  • FEI POLARA 300 [2]
  • FEI TECNAI 20 [2]
  • FEI/PHILIPS CM200FEG [2]
  • FEI/PHILIPS CM120T [1]

Electron Source

  • FIELD EMISSION GUN [50]
  • LAB6 [15]

Film or detector model

  • TVIPS TEMCAM-F416 4K X 4K [15]
  • FEI FALCON III 4K X 4K [9]
  • GATAN ULTRASCAN 4000 4K X 4K [7]
  • TVIPS TEMCAM-F415 4K X 4K [7]
  • KODAK SO-163 FILM [4]
  • FEI FALCON II 4K X 4K [3]
  • FEI FALCON I 4K X 4K [1]
  • GATAN K2 4K X 4K [1]
  • GENERIC GATAN 4K X 4K [1]
  • GENERIC TVIPS [1]
  • KODAK 4489 FILM [1]

EMPIAR Experiment type

  • EMDB [6]

EMPIAR Image category

  • MICROGRAPHS - SINGLE FRAME [6]
  • MICROGRAPHS - MULTIFRAME [5]

External links

  • PDBe-Kb [27]
  • UniProt [27]
  • AlphaFold DB [19]
  • PDB [11]
  • InterPro [8]
  • Pfam [8]
  • EMDB [6]
  • Gene Ontology [6]
  • EMPIAR [5]
  • SCOP2 [1]
Sort by: Download
Showing 1 - 10 of 71. Page 1 of 8
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EMPIAR-11065
Related EMDB
EMD-15134
Nudaurelia capensis omega virus procapsid at pH7.6 (insect cell expressed VLPs)
Release date: Feb. 14, 2023
Dataset size: 13.1 TB
Experiment type: EMDB

Castells-Graells R, Hesketh EL, Johnson JE, Ranson NA, Lawson DM, Lomonossoff GP

To Be Published

Image sets:
  • unaligned movies
  • aligned and dose-weighted micrographs
EMPIAR-11082
Related EMDB
EMD-15209
Nudaurelia capensis omega virus maturation intermediate captured at pH6.25 (insect cell expressed VLPs)
Release date: Feb. 14, 2023
Dataset size: 13.5 TB
Experiment type: EMDB

Castells-Graells R, Hesketh EL, Johnson JE, Ranson NA, Lawson DM, Lomonossoff GP

To Be Published

Image sets:
  • unaligned movies
  • aligned and dose-weighted micrographs
EMPIAR-11060
Related EMDB
EMD-15112
Nudaurelia capensis omega virus maturation intermediate captured at pH5.9 (insect cell expressed VLPs)
Release date: Feb. 13, 2023
Dataset size: 12.8 TB
Experiment type: EMDB

Castells-Graells R, Hesketh EL, Johnson JE, Ranson NA, Lawson DM, Lomonossoff GP

To Be Published

Image sets:
  • unaligned movies
  • aligned and dose-weighted micrographs
EMPIAR-11083
Related EMDB
EMD-15209
Nudaurelia capensis omega virus maturation intermediates captured at pH5.6 (insect cell expressed VLPs)
Release date: Feb. 13, 2023
Dataset size: 21.2 TB
Experiment type: EMDB

Castells-Graells R, Hesketh EL, Johnson JE, Ranson NA, Lawson DM, Lomonossoff GP

To Be Published

Image sets:
  • unaligned movies
  • aligned and dose-weighted micrographs
EMD-15112
Download Map
3D View
Raw data
EMPIAR-11060
Nudaurelia capensis omega virus maturation intermediate captured at pH5.9 insect cell expressed VLPs
Release date: Dec. 28, 2022
Resolution: 3.92 Å
EM Method: Single-particle
Fitted PDBs: 8a3c
Q-score: 0.369

Castells-Graells R, Hesketh EL, Johnson JE, Ranson NA, Lawson DM, Lomonossoff GP

To Be Published

EMD-15134
Download Map
3D View
Raw data
EMPIAR-11065
Nudaurelia capensis omega virus procapsid at pH7.6 insect cell expressed VLPs
Release date: Dec. 28, 2022
Resolution: 4.88 Å
EM Method: Single-particle
Fitted PDBs: 8a41
Q-score: 0.259

Castells-Graells R, Hesketh EL, Johnson JE, Ranson NA, Lawson DM, Lomonossoff GP

To Be Published

EMD-15209
Download Map
3D View
Raw data
EMPIAR-11083 EMPIAR-11082
Nudaurelia capensis omega virus maturation intermediate captured at pH6.25 insect cell expressed VLPs
Release date: Dec. 28, 2022
Resolution: 4.8 Å
EM Method: Single-particle
Fitted PDBs: 8a6j
Q-score: 0.211

Castells-Graells R, Hesketh EL, Johnson JE, Ranson NA, Lawson DM, Lomonossoff GP

To Be Published

EMD-15266
Download Map
3D View
Nudaurelia capensis omega virus maturation intermediates captured at pH5.6 insect cell expressed VLPs : consensus map
Release date: Dec. 28, 2022
Resolution: 3.39 Å
EM Method: Single-particle

Castells-Graells R, Hesketh EL, Johnson JE, Ranson NA, Lawson DM, Lomonossoff GP

To Be Published

EMD-15307
Download Map
3D View
Nudaurelia capensis omega virus maturation intermediate captured at pH5.6 insect cell expressed VLPs : small class from symmetry expansion
Release date: Dec. 28, 2022
Resolution: 3.39 Å
EM Method: Single-particle
Fitted PDBs: 8aay
Q-score: 0.527

Castells-Graells R, Hesketh EL, Johnson JE, Ranson NA, Lawson DM, Lomonossoff GP

To Be Published

EMD-15339
Download Map
3D View
Nudaurelia capensis omega virus maturation intermediate captured at pH5.6 insect cell expressed VLPs : medium class from symmetry expansion
Release date: Dec. 28, 2022
Resolution: 3.63 Å
EM Method: Single-particle
Fitted PDBs: 8ac6
Q-score: 0.402

Castells-Graells R, Hesketh EL, Johnson JE, Ranson NA, Lawson DM, Lomonossoff GP

To Be Published

Sort by: Download
Showing 1 - 10 of 71. Page 1 of 8
Display:
Statistics
×

Download












































Preview first 10
Download

Filter By

Current Database

  • EMDB [65]
  • EMPIAR [6]

Current status

  • REL [71]

Sample type

  • Sample [52]
  • Virus [40]
  • Protein [34]

Organism

  • Nudaurelia capensis omega virus [22]
  • Homo sapiens [19]
  • Human mastadenovirus d [14]
  • Salmonella phage p22 [11]
  • Sulfolobus turreted icosahedral virus 1 [3]
  • Enterobacteria phage hk97 [3]
  • Vibrio phage sio-2 [2]
  • Escherichia phage lambda [1]

EM Method

  • Single-particle [65]

Resolution

  • ≥ 2Å and < 3Å [1]
  • ≥ 3Å and < 4Å [5]
  • ≥ 4Å and < 5Å [3]
  • ≥ 5Å and < 6Å [1]
  • ≥ 6Å and < 8Å [4]
  • ≥ 8Å and < 12Å [13]
  • ≥ 12Å and < 16Å [4]
  • ≥ 16Å and < 20Å [1]
  • ≥ 20Å and < 30Å [6]
  • ≥ 30Å [20]

Model molecular weight

  • > 10 MDa [11]

Release Date

  • 2023 [4]
  • 2022 [9]
  • 2021 [2]
  • 2019 [1]
  • 2018 [3]
  • 2015 [1]
  • 2014 [22]
  • 2013 [9]
  • 2012 [7]
  • 2011 [3]
  • 2010 [3]
  • 2009 [5]
  • 2006 [1]
  • 2005 [1]

Author by name

  • Johnson JE [71]
  • Veesler D [24]
  • Burger M [19]
  • Cupelli K [19]
  • Graber P [19]
  • Stehle T [19]
  • Castells-graells R [15]
  • Hesketh EL [15]
  • Lander GC [15]
  • Lawson DM [15]
  • Lomonossoff GP [15]
  • Ranson NA [15]
  • Domitrovic T [12]
  • Matsui T [12]
  • Khayat R [11]
  • Carragher B [10]
  • Potter CS [10]
  • Baker TS [9]
  • Doerschuk PC [8]
  • Wang Q [8]
  • Zheng Y [8]
  • Li R [6]
  • Cingolani G [5]
  • Casjens SR [4]
  • Gilcrease EB [4]
  • Lander G [4]
  • Mcnulty R [4]
  • Prevelige P [4]
  • Prevelige PE [4]
  • Ribeiro JRS [4]
  • Scarff CA [4]
  • Tang J [4]
  • Cardone G [3]
  • Casjens S [3]
  • Olia A [3]
  • Olia AS [3]
  • Tang L [3]
  • Anand GS [2]
  • Azam F [2]
  • Baudoux AC [2]
  • Cortines JR [2]
  • Evilevitch A [2]
  • Fu CY [2]
  • Heck AJR [2]
  • Huang RK [2]
  • Jeembaeva M [2]
  • Krishnamurthy S [2]
  • Parent KN [2]
  • Snijder J [2]
  • Suhanovsky MM [2]
  • Teschke CM [2]
  • Tu LH [2]
  • Bothner B [1]
  • Campbell MG [1]
  • Cheng A [1]
  • Coritnes JR [1]
  • Douglas T [1]
  • Eilers BJ [1]
  • Gillitzer E [1]
  • Grigorieff N [1]
  • Heck AJ [1]
  • Lawrence CM [1]
  • Lee KK [1]
  • Lok SM [1]
  • Lokareddy RK [1]
  • Marion WR [1]
  • Murez Z [1]
  • Ng TS [1]
  • Poliakov A [1]
  • Quispe J [1]
  • Rice G [1]
  • Roberto F [1]
  • Roy A [1]
  • Sendamarai AK [1]
  • Spuhler J [1]
  • Stedman K [1]
  • Yang Y [1]
  • Yeager M [1]
  • Young M [1]
  • Young MJ [1]

Author by ORCID

  • Lander GC [15]
  • Matsui T [12]
  • Carragher B [10]
  • Ranson NA [9]
  • Castells-graells R [9]
  • Hesketh EL [9]
  • Lawson DM [9]
  • Lomonossoff GP [9]
  • Domitrovic T [8]
  • Baker TS [6]
  • Johnson JE [5]
  • Mcnulty R [4]
  • Cingolani G [3]
  • Li R [3]
  • Cardone G [3]
  • Krishnamurthy S [2]
  • Scarff CA [2]
  • Evilevitch A [2]
  • Heck AJR [2]
  • Cortines JR [2]
  • Sendamarai AK [1]
  • Casjens SR [1]
  • Grigorieff N [1]
  • Heck AJ [1]
  • Quispe J [1]
  • Lawrence CM [1]
  • Campbell MG [1]
  • Lok SM [1]
  • Lander G [1]

Journal

  • PNAS [25]
  • STRUCTURE [15]
  • J STRUCT BIOL [9]
  • TO BE PUBLISHED [7]
  • COMMUN BIOL [4]
  • BIOPHYS J [3]
  • J MOL BIOL [2]
  • EMBO J [1]
  • SCIENCE [1]

Software

  • SPIDER [20]
  • RELION [10]
  • FREALIGN [7]
  • EMAN [6]
  • AUTO3DEM [5]
  • EMAN, SPIDER [3]
  • CHIMERA [2]
  • EMAN AND FREALIGN [2]
  • EMAN2 [2]
  • CNS [1]
  • COLORES [1]
  • SPIDER, EMAN [1]
  • UCSF CHIMERA [1]

Microscope

  • FEI TECNAI F20 [30]
  • FEI TECNAI 12 [15]
  • FEI TITAN KRIOS [10]
  • FEI TALOS ARCTICA [3]
  • FEI POLARA 300 [2]
  • FEI TECNAI 20 [2]
  • FEI/PHILIPS CM200FEG [2]
  • FEI/PHILIPS CM120T [1]

Electron Source

  • FIELD EMISSION GUN [50]
  • LAB6 [15]

Film or detector model

  • TVIPS TEMCAM-F416 4K X 4K [15]
  • FEI FALCON III 4K X 4K [9]
  • GATAN ULTRASCAN 4000 4K X 4K [7]
  • TVIPS TEMCAM-F415 4K X 4K [7]
  • KODAK SO-163 FILM [4]
  • FEI FALCON II 4K X 4K [3]
  • FEI FALCON I 4K X 4K [1]
  • GATAN K2 4K X 4K [1]
  • GENERIC GATAN 4K X 4K [1]
  • GENERIC TVIPS [1]
  • KODAK 4489 FILM [1]

EMPIAR Experiment type

  • EMDB [6]

EMPIAR Image category

  • MICROGRAPHS - SINGLE FRAME [6]
  • MICROGRAPHS - MULTIFRAME [5]

External links

  • PDBe-Kb [27]
  • UniProt [27]
  • AlphaFold DB [19]
  • PDB [11]
  • InterPro [8]
  • Pfam [8]
  • EMDB [6]
  • Gene Ontology [6]
  • EMPIAR [5]
  • SCOP2 [1]