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author:"Jenkins HT"

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Current Database

  • EMDB [15]
  • EMPIAR [7]

Current status

  • REL [22]

Sample type

  • Protein [15]
  • Complex [9]
  • Virus [6]
  • DNA [2]
  • Ligand [2]
  • RNA [2]

Organism

  • 3144506 [6]
  • Nipah virus [4]
  • Rhodobacter capsulatus [4]
  • Drosophila melanogaster [3]
  • Rhodobacter capsulatus [2]
  • Enterobacteria phage hk97 [2]
  • Escherichia coli [2]
  • (no species) [1]
  • Byrnievirus hk97 [1]

EM Method

  • Single-particle [13]
  • Subtomogram averaging [2]

Resolution

  • ≥ 2Å and < 3Å [1]
  • ≥ 3Å and < 4Å [5]
  • ≥ 4Å and < 5Å [3]
  • ≥ 5Å and < 6Å [1]
  • ≥ 6Å and < 8Å [2]
  • ≥ 12Å and < 16Å [1]
  • ≥ 20Å and < 30Å [1]
  • ≥ 30Å [1]

Model molecular weight

  • 100-250 kDa [1]
  • 250-500 kDa [3]
  • 500-1000 kDa [2]
  • 2-5 MDa [2]

Release Date

  • 2026 [2]
  • 2025 [2]
  • 2024 [11]
  • 2023 [3]
  • 2021 [4]

Author by name

  • Jenkins HT [22]
  • Antson AA [19]
  • Chechik M [17]
  • Alim NTB [12]
  • Bardy P [12]
  • Beatty JT [12]
  • Blaza JN [12]
  • Botka T [12]
  • Byrom L [12]
  • Fogg PCM [12]
  • Hart SJ [12]
  • Kirchberger PC [12]
  • Konig HC [12]
  • Macdonald CIW [12]
  • Nicholas TR [12]
  • Traore DAK [12]
  • Turkenburg JP [12]
  • Greive SJ [7]
  • Ker DS [4]
  • Brzozowski AM [3]
  • Shafi T [3]
  • Isupov MN [2]
  • Moroz OV [2]
  • De Meyts P [1]
  • Frittmann O [1]
  • Viola CM [1]

Author by ORCID

  • Jenkins HT [15]
  • Antson AA [12]
  • Fogg PCM [6]
  • Blaza JN [6]
  • Greive SJ [6]
  • Bardy P [6]
  • Beatty JT [6]
  • Kirchberger PC [6]
  • Traore DAK [6]
  • Botka T [6]
  • Ker DS [4]
  • Brzozowski AM [3]
  • Isupov MN [2]
  • Shafi T [2]
  • Chechik M [2]
  • Moroz OV [2]
  • De Meyts P [1]

Journal

  • BIORXIV [14]
  • PLOS PATHOG [4]
  • PNAS [3]
  • TO BE PUBLISHED [2]
  • NAT COMMUN [1]

Software

  • RELION [10]
  • CTFFIND [2]
  • EMAN2 [2]

Microscope

  • TFS GLACIOS [7]
  • FEI TITAN KRIOS [6]
  • TFS KRIOS [2]

Electron Source

  • FIELD EMISSION GUN [15]

Film or detector model

  • FEI FALCON IV 4K X 4K [7]
  • GATAN K2 SUMMIT 4K X 4K [6]
  • GATAN K3 6K X 4K [1]
  • GATAN K3 BIOQUANTUM 6K X 4K [1]

EMPIAR Experiment type

  • EMDB [7]

EMPIAR Image category

  • MICROGRAPHS - MULTIFRAME [5]
  • TILT SERIES [2]

External links

  • PDB [15]
  • EMPIAR [10]
  • PDBe-Kb [9]
  • UniProt [9]
  • AlphaFold DB [7]
  • EMDB [7]
  • Gene Ontology [4]
  • InterPro [3]
  • Pfam [3]
  • ChEBI [2]
  • ChEMBL [2]
Sort by: Download
Showing 1 - 10 of 22. Page 1 of 3
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Preview first 10
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EMD-52236
Download Map
3D View
Raw data
EMPIAR-13076
Drosophila melanogaster insulin receptor ectodomain in complex with one DILP2 molecule
CryoEM
Release date: May 6, 2026
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 9hkt
Q-score: 0.299

Shafi T, Moroz OV, Jenkins HT, Chechik M, Isupov MN, Brzozowski AM

To Be Published

EMD-52310
Download Map
3D View
Raw data
EMPIAR-13076
Drosophila melanogaster insulin receptor ectodomain in complex with two DILP2 molecules
CryoEM
Release date: May 6, 2026
Resolution: 6.25 Å
EM Method: Single-particle
Fitted PDBs: 9hni
Q-score: 0.244

Shafi T, Moroz OV, Jenkins HT, Chechik M, Isupov MN, Brzozowski AM

To Be Published

EMPIAR-12170
Related EMDB
EMD-50360
Rhodobacter microvirus Ebor attached to the outer membrane vesicle
Release date: March 17, 2025
Dataset size: 531.2 GB
Experiment type: EMDB

Bardy P, MacDonald CI, Kirchberger PC, Jenkins HT, Botka T, Byrom L, Alim NT, Traore DA, König HC, Nicholas TR, Chechik M, Hart SJ, Turkenburg JP, Blaza JN, Beatty JT, Fogg PC, Antson AA

bioRxiv (2024) [ DOI: 10.1101/2024.06.11.598214 ]

Image sets:
  • Raw eer movies of tilt series collected on Ebor attached to outer membrane vesicles
EMPIAR-12185
Related EMDB
EMD-50361
Rhodobacter microvirus Ebor attached to the host cell of Rhodobacter capsulatus B10
Release date: March 14, 2025
Dataset size: 108.0 GB
Experiment type: EMDB

Bardy P, MacDonald CIW, Kirchberger PC, Jenkins HT, Botka T, Byrom L, Alim NTB, Traore DAK, König HC, Nicholas TR, Chechik M, Hart SJ, Turkenburg JP, Blaza JN, Beatty JT, Fogg PCM, Antson AA

bioRxiv (2024) [ DOI: 10.1101/2024.06.11.598214 ]

Image sets:
  • Raw eer movies of tilt series collected on Ebor attached to the host cell of R. capsulatus B10
EMPIAR-11620
Related EMDB
EMD-17818 EMD-17794
CryoEM micrographs of HK97 small terminase in complex with DNA (2 datasets:550 and 1874 multi-frame micrographs composed of 50 frames in tif format)
Release date: Aug. 28, 2024
Dataset size: 549.9 GB
Experiment type: EMDB

Chechik M, Greive SJ, Antson AA, Jenkins HT

Proc Natl Acad Sci U S A (2024) 121 [ Pubmed: 39116131 DOI: 10.1073/pnas.2406138121 ]

Image sets:
  • Unaligned multi-frame micrographs of HK97 small terminase:DNA complex [dataset1]
  • Unaligned multi-frame micrographs of HK97 small terminase:DNA complex [dataset2]
EMPIAR-12168
Related EMDB
EMD-50359
Rhodobacter microvirus Ebor attached to B10 host cell, single particle data
Release date: July 18, 2024
Dataset size: 498.5 GB
Experiment type: EMDB

Bardy P, MacDonald CI, Kirchberger PC, Jenkins HT, Botka T, Byrom L, Alim NT, Traore DA, König HC, Nicholas TR, Chechik M, Hart SJ, Turkenburg JP, Blaza JN, Beatty JT, Fogg PC, Antson AA

bioRxiv (2024) [ DOI: 10.1101/2024.06.11.598214 ]

Image sets:
  • Raw non-normalized movies in tiff format
EMPIAR-12153
Related EMDB
EMD-50358
In vitro-induced genome-releasing intermediate of Rhodobacter microvirus Ebor computed with C5 symmetry
Release date: July 16, 2024
Dataset size: 4.3 TB
Experiment type: EMDB

Bardy P, MacDonald CI, Kirchberger PC, Jenkins HT, Botka T, Byrom L, Alim NT, Traore DA, König HC, Nicholas TR, Chechik M, Hart SJ, Turkenburg JP, Blaza JN, Beatty JT, Fogg PC, Antson AA

bioRxiv (2024) [ DOI: 10.1101/2024.06.11.598214 ]

Image sets:
  • Raw eer images of in vitro-induced genome-releasing Ebor particle
EMPIAR-12148
Related EMDB
EMD-50357
Native capsid of Rhodobacter microvirus Ebor computed with I4 symmetry
Release date: July 9, 2024
Dataset size: 1.5 TB
Experiment type: EMDB

Bardy P, MacDonald CI, Kirchberger PC, Jenkins HT, Botka T, Byrom L, Alim NT, Traore DA, König HC, Nicholas TR, Chechik M, Hart SJ, Turkenburg JP, Blaza JN, Beatty JT, Fogg PC, Antson AA

bioRxiv (2024) [ DOI: 10.1101/2024.06.11.598214 ]

Image sets:
  • Raw eer images of native Ebor particle
EMPIAR-12156
Related EMDB
EMD-50356
Empty particles of Rhodobacter microvirus Ebor
Release date: July 9, 2024
Dataset size: 1.6 TB
Experiment type: EMDB

Bardy P, MacDonald CI, Kirchberger PC, Jenkins HT, Botka T, Byrom L, Alim NT, Traore DA, König HC, Nicholas TR, Chechik M, Hart SJ, Turkenburg JP, Blaza JN, Beatty JT, Fogg PC, Antson AA

bioRxiv (2024) [ DOI: 10.1101/2024.06.11.598214 ]

Image sets:
  • Raw eer images of empty Ebor particle
EMD-50358
Download Map
3D View
Raw data
EMPIAR-12153
In vitro-induced genome-releasing intermediate of Rhodobacter microvirus Ebor computed with C5 symmetry
CryoEM
Release date: June 26, 2024
Resolution: 25.0 Å
EM Method: Single-particle

Bardy P, MacDonald CIW, Kirchberger PC, Jenkins HT, Botka T, Byrom L, Alim NTB, Traore DAK, Konig HC, Nicholas TR, Chechik M, Hart SJ, Turkenburg JP, Blaza JN, Beatty JT, Fogg PCM, Antson AA

bioRxiv (2024) [ DOI: doi:10.1101/2024.06.11.598214 Pubmed: 38915634 ]

Sort by: Download
Showing 1 - 10 of 22. Page 1 of 3
Display:
Statistics
×

Download












































Preview first 10
Download

Filter By

Current Database

  • EMDB [15]
  • EMPIAR [7]

Current status

  • REL [22]

Sample type

  • Protein [15]
  • Complex [9]
  • Virus [6]
  • DNA [2]
  • Ligand [2]
  • RNA [2]

Organism

  • 3144506 [6]
  • Nipah virus [4]
  • Rhodobacter capsulatus [4]
  • Drosophila melanogaster [3]
  • Rhodobacter capsulatus [2]
  • Enterobacteria phage hk97 [2]
  • Escherichia coli [2]
  • (no species) [1]
  • Byrnievirus hk97 [1]

EM Method

  • Single-particle [13]
  • Subtomogram averaging [2]

Resolution

  • ≥ 2Å and < 3Å [1]
  • ≥ 3Å and < 4Å [5]
  • ≥ 4Å and < 5Å [3]
  • ≥ 5Å and < 6Å [1]
  • ≥ 6Å and < 8Å [2]
  • ≥ 12Å and < 16Å [1]
  • ≥ 20Å and < 30Å [1]
  • ≥ 30Å [1]

Model molecular weight

  • 100-250 kDa [1]
  • 250-500 kDa [3]
  • 500-1000 kDa [2]
  • 2-5 MDa [2]

Release Date

  • 2026 [2]
  • 2025 [2]
  • 2024 [11]
  • 2023 [3]
  • 2021 [4]

Author by name

  • Jenkins HT [22]
  • Antson AA [19]
  • Chechik M [17]
  • Alim NTB [12]
  • Bardy P [12]
  • Beatty JT [12]
  • Blaza JN [12]
  • Botka T [12]
  • Byrom L [12]
  • Fogg PCM [12]
  • Hart SJ [12]
  • Kirchberger PC [12]
  • Konig HC [12]
  • Macdonald CIW [12]
  • Nicholas TR [12]
  • Traore DAK [12]
  • Turkenburg JP [12]
  • Greive SJ [7]
  • Ker DS [4]
  • Brzozowski AM [3]
  • Shafi T [3]
  • Isupov MN [2]
  • Moroz OV [2]
  • De Meyts P [1]
  • Frittmann O [1]
  • Viola CM [1]

Author by ORCID

  • Jenkins HT [15]
  • Antson AA [12]
  • Fogg PCM [6]
  • Blaza JN [6]
  • Greive SJ [6]
  • Bardy P [6]
  • Beatty JT [6]
  • Kirchberger PC [6]
  • Traore DAK [6]
  • Botka T [6]
  • Ker DS [4]
  • Brzozowski AM [3]
  • Isupov MN [2]
  • Shafi T [2]
  • Chechik M [2]
  • Moroz OV [2]
  • De Meyts P [1]

Journal

  • BIORXIV [14]
  • PLOS PATHOG [4]
  • PNAS [3]
  • TO BE PUBLISHED [2]
  • NAT COMMUN [1]

Software

  • RELION [10]
  • CTFFIND [2]
  • EMAN2 [2]

Microscope

  • TFS GLACIOS [7]
  • FEI TITAN KRIOS [6]
  • TFS KRIOS [2]

Electron Source

  • FIELD EMISSION GUN [15]

Film or detector model

  • FEI FALCON IV 4K X 4K [7]
  • GATAN K2 SUMMIT 4K X 4K [6]
  • GATAN K3 6K X 4K [1]
  • GATAN K3 BIOQUANTUM 6K X 4K [1]

EMPIAR Experiment type

  • EMDB [7]

EMPIAR Image category

  • MICROGRAPHS - MULTIFRAME [5]
  • TILT SERIES [2]

External links

  • PDB [15]
  • EMPIAR [10]
  • PDBe-Kb [9]
  • UniProt [9]
  • AlphaFold DB [7]
  • EMDB [7]
  • Gene Ontology [4]
  • InterPro [3]
  • Pfam [3]
  • ChEBI [2]
  • ChEMBL [2]