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author:"Hutchings J"

Filter By

Current Database

  • EMDB [91]
  • EMPIAR [4]

Current status

  • REL [95]

Sample type

  • Cell [40]
  • Complex [28]
  • Cellular component [23]
  • Protein [13]
  • Ligand [5]
  • Virus [1]

Organism

  • Homo sapiens [32]
  • Saccharomyces cerevisiae [15]
  • Mus musculus [14]
  • Escherichia coli [10]
  • Toxoplasma gondii [9]
  • Saccharomyces cerevisiae [7]
  • Mycoplasma mycoides [3]
  • Human respiratory syncytial virus [2]

EM Method

  • Subtomogram averaging [83]
  • Tomography [6]
  • Single-particle [2]

Resolution

  • < 2Å [2]
  • ≥ 3Å and < 4Å [1]
  • ≥ 4Å and < 5Å [7]
  • ≥ 5Å and < 6Å [6]
  • ≥ 6Å and < 8Å [8]
  • ≥ 8Å and < 12Å [17]
  • ≥ 12Å and < 16Å [6]
  • ≥ 16Å and < 20Å [5]
  • ≥ 20Å and < 30Å [5]
  • ≥ 30Å [32]

Model molecular weight

  • 100-250 kDa [2]
  • 250-500 kDa [3]
  • 500-1000 kDa [1]

Release Date

  • 2026 [21]
  • 2025 [32]
  • 2024 [32]
  • 2022 [1]
  • 2021 [7]
  • 2018 [2]

Author by name

  • Hutchings J [95]
  • Villa E [58]
  • Shaikh F [39]
  • Chait BT [31]
  • Duquette M [31]
  • Echeverria I [31]
  • Fernandez-martinez J [31]
  • Guo Q [31]
  • Li Z [31]
  • Molloy K [31]
  • Rout MP [31]
  • Sali A [31]
  • Shi Y [31]
  • Singh D [31]
  • Soni N [31]
  • Suslov S [31]
  • Wang J [31]
  • Van Eeuwen T [31]
  • Agard DA [27]
  • Carragher B [27]
  • Ermel UH [27]
  • Kimanius D [27]
  • Paraan M [27]
  • Peck A [27]
  • Potter CS [27]
  • Schwartz J [27]
  • Yu Y [27]
  • Zheng S [27]
  • Artley B [18]
  • Asuncion J [18]
  • Evans K [18]
  • Gadling J [18]
  • Harrington K [18]
  • Kandel S [18]
  • Khandwala K [18]
  • List D [18]
  • Mccanny S [18]
  • Mccarthy DG [18]
  • Ni JX [18]
  • Pourroy J [18]
  • Reade W [18]
  • Venkatakrishnan M [18]
  • Wang ZS [18]
  • Zhao Z [18]
  • Riggi M [14]
  • Rosen MK [14]
  • Zhou H [14]
  • Silva SA [12]
  • Zanetti G [10]
  • Ali M [9]
  • Cheng A [9]
  • Hill NS [9]
  • Ji D [9]
  • Montabana EA [9]
  • Serwas D [9]
  • Siems H [9]
  • Woldeyes R [9]
  • Flaherty WA [8]
  • Giraldez AJ [8]
  • Miller EA [8]
  • Narasimhan M [8]
  • Young LN [8]
  • Adler BA [7]
  • Aindow A [7]
  • Armbruster EG [7]
  • Buschkaemper H [7]
  • Charles E [7]
  • Corbett KD [7]
  • Cress BF [7]
  • Daksh D [7]
  • Deep A [7]
  • Doudna JA [7]
  • Enustun E [7]
  • Ghassemian M [7]
  • Hoffman LY [7]
  • Hoffman MY [7]
  • Inlow K [7]
  • Klusch N [7]
  • Laughlin TG [7]
  • Lee J [7]
  • Morgan CJ [7]
  • Pogliano J [7]
  • Pogliano K [7]
  • Rani P [7]
  • Rodriguez ZK [7]
  • Savage DF [7]
  • Vanderwal AR [7]
  • Basiashvili T [6]
  • Brown NR [6]
  • Chen S [6]
  • Cheung ACM [6]
  • Doolittle LK [6]
  • Leschziner AE [6]
  • Rosen M [6]
  • Shiozaki M [6]
  • Silva Jr Sa [6]
  • Stancheva VG [6]
  • Yu Z [6]
  • Zhao X [6]
  • Alegrio Louro J [5]

Author by ORCID

  • Soni N [31]
  • Guo Q [31]
  • Echeverria I [31]
  • Duquette M [31]
  • Paraan M [15]
  • Ermel UH [15]
  • Hutchings J [14]
  • Rosen MK [10]
  • Villa E [10]
  • Serwas D [9]
  • Woldeyes R [9]
  • Ji D [9]
  • Hill NS [9]
  • Zanetti G [8]
  • Cress BF [7]
  • Klusch N [7]
  • Zheng S [6]
  • Carragher B [6]
  • Miller EA [6]
  • Zhao Z [6]
  • Kimanius D [6]
  • Yu Y [6]
  • Potter CS [6]
  • Peck A [6]
  • Harrington K [6]
  • Kandel S [6]
  • Zhou H [6]
  • Schwartz J [6]
  • Riggi M [6]
  • Agard DA [6]
  • Bennett EJ [4]
  • Giraldez AJ [4]
  • Young LN [4]
  • Jean N [4]
  • Stancheva V [2]
  • Hwang JH [2]
  • Power BJ [2]
  • Streetley J [2]
  • Soranno A [2]
  • Espinosa JR [2]
  • Haney J [2]
  • Jaffery H [2]
  • Vijayakrishnan S [2]
  • Conley MJ [2]
  • Murcia PR [2]
  • Shiozaki M [2]
  • Samanta N [2]
  • Yao RW [2]
  • Yu Z [2]
  • Short JM [2]
  • Gibson BA [2]
  • Fearns R [2]
  • Collepardo-guevara R [2]
  • Bhella D [2]
  • Burns AM [2]
  • Huertas J [2]
  • Bakker SE [2]
  • Maristany MJ [2]

Journal

  • CELL [31]
  • NAT METHODS [22]
  • BIORXIV [15]
  • IUCRJ [9]
  • NAT COMMUN [8]
  • CELL HOST MICROBE [7]
  • ELIFE [6]
  • TO BE PUBLISHED [6]
  • PNAS [4]
  • EMBO J [2]
  • SCIENCE [2]

Software

  • RELION [41]
  • WARP [19]
  • DYNAMO [14]
  • UCSF CHIMERAX [6]
  • CRYOLO [3]
  • CTFFIND [3]
  • NOVACTF [3]
  • CRYOSPARC [2]
  • IMOD [1]

Microscope

  • TFS KRIOS [46]
  • FEI TITAN KRIOS [45]

Electron Source

  • FIELD EMISSION GUN [91]

Film or detector model

  • TFS FALCON 4I 4K X 4K [25]
  • GATAN K3 6K X 4K [22]
  • GATAN K2 SUMMIT 4K X 4K [21]
  • GATAN K3 BIOCONTINUUM 6K X 4K [15]
  • FEI FALCON IV 4K X 4K [4]
  • FEI FALCON III 4K X 4K [2]
  • GATAN K2 QUANTUM 4K X 4K [2]

EMPIAR Experiment type

  • FIB-SEM [4]

EMPIAR Image category

  • TILT SERIES [4]

External links

  • PDB [91]
  • AlphaFold DB [13]
  • PDBe-Kb [13]
  • UniProt [13]
  • Gene Ontology [6]
  • InterPro [6]
  • Pfam [6]
  • ChEBI [5]
  • ChEMBL [5]
  • DrugBank [5]
  • Complex Portal [2]
Sort by: Download
Showing 1 - 10 of 95. Page 1 of 10
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EMD-70743
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3D View
Nucleosome subtomogram average from chromatin droplets reconstituted with 30 bp linker DNA
CryoEM
Release date: May 6, 2026
Resolution: 5.8 Å
EM Method: Subtomogram averaging

Zhou H, Huertas J, Maristany MJ, Russell K, Hwang JH, Yao RW, Samanta N, Hutchings J, Billur R, Shiozaki M, Zhao X, Doolittle LK, Gibson BA, Soranno A, Riggi M, Espinosa JR, Yu Z, Villa E, Collepardo-Guevara R, Rosen MK

Science (2025) 390 pp. eadv6588-eadv6588 [ Pubmed: 41343645 DOI: doi:10.1126/science.adv6588 ]

EMD-70745
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3D View
Nucleosome subtomogram average from chromatin droplets reconstituted with 25 bp linker DNA
CryoEM
Release date: May 6, 2026
Resolution: 8.0 Å
EM Method: Subtomogram averaging

Zhou H, Huertas J, Maristany MJ, Russell K, Hwang JH, Yao RW, Samanta N, Hutchings J, Billur R, Shiozaki M, Zhao X, Doolittle LK, Gibson BA, Soranno A, Riggi M, Espinosa JR, Yu Z, Villa E, Collepardo-Guevara R, Rosen MK

Science (2025) 390 pp. eadv6588-eadv6588 [ Pubmed: 41343645 DOI: doi:10.1126/science.adv6588 ]

EMD-76895
Download Map
3D View
The Kaggle CryoET Object Identification Challenge: first place 80S ribosome
CryoEM
Release date: May 6, 2026
Resolution: 4.7 Å
EM Method: Subtomogram averaging

Peck A, Hutchings J, Schwartz J, Yu Y, Ermel UH, Kandel S, Kimanius D, Zhao Z, Zheng S, Artley B, List D, Silva Jr SA, Reade W, Asuncion J, Evans K, Gadling J, Khandwala K, McCanny S, McCarthy DG, Ni JX, Pourroy J, Venkatakrishnan M, Wang ZS, Agard DA, Potter CS, Carragher B, Harrington K, Paraan M

To Be Published

EMD-76896
Download Map
3D View
The Kaggle CryoET Object Identification Challenge: first place apo-ferritin
CryoEM
Release date: May 6, 2026
Resolution: 6.04 Å
EM Method: Subtomogram averaging

Peck A, Hutchings J, Schwartz J, Yu Y, Ermel UH, Kandel S, Kimanius D, Zhao Z, Zheng S, Artley B, List D, Silva Jr SA, Reade W, Asuncion J, Evans K, Gadling J, Khandwala K, McCanny S, McCarthy DG, Ni JX, Pourroy J, Venkatakrishnan M, Wang ZS, Agard DA, Potter CS, Carragher B, Harrington K, Paraan M

To Be Published

EMD-76898
Download Map
3D View
The Kaggle CryoET Object Identification Challenge: first place virus-like-particle
CryoEM
Release date: May 6, 2026
Resolution: 5.2 Å
EM Method: Subtomogram averaging

Peck A, Hutchings J, Schwartz J, Yu Y, Ermel UH, Kandel S, Kimanius D, Zhao Z, Zheng S, Artley B, List D, Silva Jr SA, Reade W, Asuncion J, Evans K, Gadling J, Khandwala K, McCanny S, McCarthy DG, Ni JX, Pourroy J, Venkatakrishnan M, Wang ZS, Agard DA, Potter CS, Carragher B, Harrington K, Paraan M

To Be Published

EMD-76899
Download Map
3D View
The Kaggle CryoET Object Identification Challenge: first place beta-galactosidase
CryoEM
Release date: May 6, 2026
Resolution: 8.1 Å
EM Method: Subtomogram averaging

Peck A, Hutchings J, Schwartz J, Yu Y, Ermel UH, Kandel S, Kimanius D, Zhao Z, Zheng S, Artley B, List D, Silva Jr SA, Reade W, Asuncion J, Evans K, Gadling J, Khandwala K, McCanny S, McCarthy DG, Ni JX, Pourroy J, Venkatakrishnan M, Wang ZS, Agard DA, Potter CS, Carragher B, Harrington K, Paraan M

To Be Published

EMD-76900
Download Map
3D View
The Kaggle CryoET Object Identification Challenge: first place beta-amylase
CryoEM
Release date: May 6, 2026
Resolution: 10.6 Å
EM Method: Subtomogram averaging

Peck A, Hutchings J, Schwartz J, Yu Y, Ermel UH, Kandel S, Kimanius D, Zhao Z, Zheng S, Artley B, List D, Silva Jr SA, Reade W, Asuncion J, Evans K, Gadling J, Khandwala K, McCanny S, McCarthy DG, Ni JX, Pourroy J, Venkatakrishnan M, Wang ZS, Agard DA, Potter CS, Carragher B, Harrington K, Paraan M

To Be Published

EMD-76901
Download Map
3D View
The Kaggle CryoET Object Identification Challenge: first place thyroglobulin
CryoEM
Release date: May 6, 2026
Resolution: 8.4 Å
EM Method: Subtomogram averaging

Peck A, Hutchings J, Schwartz J, Yu Y, Ermel UH, Kandel S, Kimanius D, Zhao Z, Zheng S, Artley B, List D, Silva Jr SA, Reade W, Asuncion J, Evans K, Gadling J, Khandwala K, McCanny S, McCarthy DG, Ni JX, Pourroy J, Venkatakrishnan M, Wang ZS, Agard DA, Potter CS, Carragher B, Harrington K, Paraan M

To Be Published

EMD-49923
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3D View
Subtomogram average of nucleosome structure extracted from the HeLa cell nuclei
CryoEM
Release date: April 8, 2026
Resolution: 12.0 Å
EM Method: Subtomogram averaging

Zhou H, Hutchings J, Shiozaki M, Zhao X, Doolittle LK, Yang S, Yan R, Jean N, Riggi M, Yu Z, Villa E, Rosen MK

PNAS (2025) 122 pp. e2426449122-e2426449122 [ Pubmed: 40327693 DOI: doi:10.1073/pnas.2426449122 ]

EMD-49924
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3D View
Subtomogram averaging of nucleosomes in reconstituted chromatin condensates
CryoEM
Release date: April 8, 2026
Resolution: 6.1 Å
EM Method: Subtomogram averaging

Zhou H, Hutchings J, Shiozaki M, Zhao X, Doolittle LK, Yang S, Yan R, Jean N, Riggi M, Yu Z, Villa E, Rosen MK

PNAS (2025) 122 pp. e2426449122-e2426449122 [ Pubmed: 40327693 DOI: doi:10.1073/pnas.2426449122 ]

Sort by: Download
Showing 1 - 10 of 95. Page 1 of 10
Display:
Statistics
×

Download












































Preview first 10
Download

Filter By

Current Database

  • EMDB [91]
  • EMPIAR [4]

Current status

  • REL [95]

Sample type

  • Cell [40]
  • Complex [28]
  • Cellular component [23]
  • Protein [13]
  • Ligand [5]
  • Virus [1]

Organism

  • Homo sapiens [32]
  • Saccharomyces cerevisiae [15]
  • Mus musculus [14]
  • Escherichia coli [10]
  • Toxoplasma gondii [9]
  • Saccharomyces cerevisiae [7]
  • Mycoplasma mycoides [3]
  • Human respiratory syncytial virus [2]

EM Method

  • Subtomogram averaging [83]
  • Tomography [6]
  • Single-particle [2]

Resolution

  • < 2Å [2]
  • ≥ 3Å and < 4Å [1]
  • ≥ 4Å and < 5Å [7]
  • ≥ 5Å and < 6Å [6]
  • ≥ 6Å and < 8Å [8]
  • ≥ 8Å and < 12Å [17]
  • ≥ 12Å and < 16Å [6]
  • ≥ 16Å and < 20Å [5]
  • ≥ 20Å and < 30Å [5]
  • ≥ 30Å [32]

Model molecular weight

  • 100-250 kDa [2]
  • 250-500 kDa [3]
  • 500-1000 kDa [1]

Release Date

  • 2026 [21]
  • 2025 [32]
  • 2024 [32]
  • 2022 [1]
  • 2021 [7]
  • 2018 [2]

Author by name

  • Hutchings J [95]
  • Villa E [58]
  • Shaikh F [39]
  • Chait BT [31]
  • Duquette M [31]
  • Echeverria I [31]
  • Fernandez-martinez J [31]
  • Guo Q [31]
  • Li Z [31]
  • Molloy K [31]
  • Rout MP [31]
  • Sali A [31]
  • Shi Y [31]
  • Singh D [31]
  • Soni N [31]
  • Suslov S [31]
  • Wang J [31]
  • Van Eeuwen T [31]
  • Agard DA [27]
  • Carragher B [27]
  • Ermel UH [27]
  • Kimanius D [27]
  • Paraan M [27]
  • Peck A [27]
  • Potter CS [27]
  • Schwartz J [27]
  • Yu Y [27]
  • Zheng S [27]
  • Artley B [18]
  • Asuncion J [18]
  • Evans K [18]
  • Gadling J [18]
  • Harrington K [18]
  • Kandel S [18]
  • Khandwala K [18]
  • List D [18]
  • Mccanny S [18]
  • Mccarthy DG [18]
  • Ni JX [18]
  • Pourroy J [18]
  • Reade W [18]
  • Venkatakrishnan M [18]
  • Wang ZS [18]
  • Zhao Z [18]
  • Riggi M [14]
  • Rosen MK [14]
  • Zhou H [14]
  • Silva SA [12]
  • Zanetti G [10]
  • Ali M [9]
  • Cheng A [9]
  • Hill NS [9]
  • Ji D [9]
  • Montabana EA [9]
  • Serwas D [9]
  • Siems H [9]
  • Woldeyes R [9]
  • Flaherty WA [8]
  • Giraldez AJ [8]
  • Miller EA [8]
  • Narasimhan M [8]
  • Young LN [8]
  • Adler BA [7]
  • Aindow A [7]
  • Armbruster EG [7]
  • Buschkaemper H [7]
  • Charles E [7]
  • Corbett KD [7]
  • Cress BF [7]
  • Daksh D [7]
  • Deep A [7]
  • Doudna JA [7]
  • Enustun E [7]
  • Ghassemian M [7]
  • Hoffman LY [7]
  • Hoffman MY [7]
  • Inlow K [7]
  • Klusch N [7]
  • Laughlin TG [7]
  • Lee J [7]
  • Morgan CJ [7]
  • Pogliano J [7]
  • Pogliano K [7]
  • Rani P [7]
  • Rodriguez ZK [7]
  • Savage DF [7]
  • Vanderwal AR [7]
  • Basiashvili T [6]
  • Brown NR [6]
  • Chen S [6]
  • Cheung ACM [6]
  • Doolittle LK [6]
  • Leschziner AE [6]
  • Rosen M [6]
  • Shiozaki M [6]
  • Silva Jr Sa [6]
  • Stancheva VG [6]
  • Yu Z [6]
  • Zhao X [6]
  • Alegrio Louro J [5]

Author by ORCID

  • Soni N [31]
  • Guo Q [31]
  • Echeverria I [31]
  • Duquette M [31]
  • Paraan M [15]
  • Ermel UH [15]
  • Hutchings J [14]
  • Rosen MK [10]
  • Villa E [10]
  • Serwas D [9]
  • Woldeyes R [9]
  • Ji D [9]
  • Hill NS [9]
  • Zanetti G [8]
  • Cress BF [7]
  • Klusch N [7]
  • Zheng S [6]
  • Carragher B [6]
  • Miller EA [6]
  • Zhao Z [6]
  • Kimanius D [6]
  • Yu Y [6]
  • Potter CS [6]
  • Peck A [6]
  • Harrington K [6]
  • Kandel S [6]
  • Zhou H [6]
  • Schwartz J [6]
  • Riggi M [6]
  • Agard DA [6]
  • Bennett EJ [4]
  • Giraldez AJ [4]
  • Young LN [4]
  • Jean N [4]
  • Stancheva V [2]
  • Hwang JH [2]
  • Power BJ [2]
  • Streetley J [2]
  • Soranno A [2]
  • Espinosa JR [2]
  • Haney J [2]
  • Jaffery H [2]
  • Vijayakrishnan S [2]
  • Conley MJ [2]
  • Murcia PR [2]
  • Shiozaki M [2]
  • Samanta N [2]
  • Yao RW [2]
  • Yu Z [2]
  • Short JM [2]
  • Gibson BA [2]
  • Fearns R [2]
  • Collepardo-guevara R [2]
  • Bhella D [2]
  • Burns AM [2]
  • Huertas J [2]
  • Bakker SE [2]
  • Maristany MJ [2]

Journal

  • CELL [31]
  • NAT METHODS [22]
  • BIORXIV [15]
  • IUCRJ [9]
  • NAT COMMUN [8]
  • CELL HOST MICROBE [7]
  • ELIFE [6]
  • TO BE PUBLISHED [6]
  • PNAS [4]
  • EMBO J [2]
  • SCIENCE [2]

Software

  • RELION [41]
  • WARP [19]
  • DYNAMO [14]
  • UCSF CHIMERAX [6]
  • CRYOLO [3]
  • CTFFIND [3]
  • NOVACTF [3]
  • CRYOSPARC [2]
  • IMOD [1]

Microscope

  • TFS KRIOS [46]
  • FEI TITAN KRIOS [45]

Electron Source

  • FIELD EMISSION GUN [91]

Film or detector model

  • TFS FALCON 4I 4K X 4K [25]
  • GATAN K3 6K X 4K [22]
  • GATAN K2 SUMMIT 4K X 4K [21]
  • GATAN K3 BIOCONTINUUM 6K X 4K [15]
  • FEI FALCON IV 4K X 4K [4]
  • FEI FALCON III 4K X 4K [2]
  • GATAN K2 QUANTUM 4K X 4K [2]

EMPIAR Experiment type

  • FIB-SEM [4]

EMPIAR Image category

  • TILT SERIES [4]

External links

  • PDB [91]
  • AlphaFold DB [13]
  • PDBe-Kb [13]
  • UniProt [13]
  • Gene Ontology [6]
  • InterPro [6]
  • Pfam [6]
  • ChEBI [5]
  • ChEMBL [5]
  • DrugBank [5]
  • Complex Portal [2]