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author:"Halic M"

Filter By

Current Database

  • EMDB [111]
  • EMPIAR [2]

Current status

  • REL [113]

Sample type

  • Complex [111]
  • Protein [65]
  • DNA [58]
  • Ligand [14]
  • Sample [11]
  • Other [3]

Organism

  • Xenopus laevis [56]
  • Homo sapiens [54]
  • Synthetic construct [32]
  • Schizosaccharomyces pombe [12]
  • Triticum sp. [6]
  • Escherichia coli [3]
  • Chaetomium thermophilum [2]
  • (no species) [2]
  • Xenopus laevis [1]
  • Saccharomyces cerevisiae [1]
  • Canis lupus [1]
  • Canis sp. [1]

EM Method

  • Single-particle [111]

Resolution

  • ≥ 2Å and < 3Å [10]
  • ≥ 3Å and < 4Å [45]
  • ≥ 4Å and < 5Å [15]
  • ≥ 5Å and < 6Å [2]
  • ≥ 6Å and < 8Å [15]
  • ≥ 8Å and < 12Å [23]
  • ≥ 12Å and < 16Å [1]

Model molecular weight

  • 50-100 kDa [1]
  • 100-250 kDa [26]
  • 250-500 kDa [19]
  • 500-1000 kDa [1]
  • 1-2 MDa [3]
  • 2-5 MDa [12]

Release Date

  • 2026 [1]
  • 2025 [20]
  • 2023 [23]
  • 2022 [12]
  • 2021 [2]
  • 2020 [7]
  • 2019 [15]
  • 2018 [11]
  • 2017 [9]
  • 2016 [2]
  • 2010 [3]
  • 2008 [2]
  • 2007 [4]
  • 2006 [1]
  • 2004 [1]

Author by name

  • Halic M [111]
  • Bilokapic S [86]
  • Deshmukh A [28]
  • Malik D [26]
  • Ali-ahmad A [23]
  • Sekulic N [23]
  • Strauss M [20]
  • Deshmukh AA [16]
  • Ferrolino M [12]
  • Kriwacki RW [12]
  • Teague J [12]
  • Ugolini I [12]
  • White M [12]
  • Yan Y [12]
  • Zhou X [12]
  • Beckmann R [11]
  • Sinha KK [11]
  • Cai W [10]
  • Du Y [10]
  • Fierz B [10]
  • Fukagawa T [10]
  • Hirano Y [10]
  • Nagpal H [10]
  • Mielke T [9]
  • Schafer IB [9]
  • Ahel I [7]
  • Becker T [7]
  • Suskiewicz MJ [7]
  • Pool MR [6]
  • Blau M [5]
  • Gaullier G [5]
  • Sinning I [5]
  • Bacic L [4]
  • Carrer M [4]
  • Cascella M [4]
  • Deindl S [4]
  • Gartmann M [4]
  • Li X [4]
  • Mors M [4]
  • Wild K [4]
  • Armache JP [3]
  • Berninghausen O [3]
  • Bhushan S [3]
  • Brackmann K [3]
  • Dimakou D [3]
  • Herzog F [3]
  • Hewitt G [3]
  • Ivic N [3]
  • Jarasch A [3]
  • Lehmann LC [3]
  • Potocnjak M [3]
  • Sabantsev A [3]
  • Solis-mezarino V [3]
  • Spahn CM [3]
  • Wilson DN [3]
  • Boulton S [2]
  • Frank J [2]
  • Marasovic M [2]
  • Pisacane P [2]
  • Zocco M [2]
  • Anand M [1]
  • Andersen CB [1]
  • Andersen G [1]
  • Andersen GR [1]
  • Balar B [1]
  • Boesen T [1]
  • Boulton SJ [1]
  • Grassucci RA [1]
  • Kinzy TG [1]
  • Pedersen JS [1]
  • Schlenker O [1]
  • Workman JL [1]

Author by ORCID

  • Halic M [95]
  • Bilokapic S [39]
  • Strauss M [20]
  • Ali-ahmad A [19]
  • Deshmukh A [15]
  • Sekulic N [13]
  • Kriwacki RW [12]
  • Yan Y [12]
  • Hirano Y [10]
  • Cai W [10]
  • Fierz B [10]
  • Sinha KK [10]
  • Du Y [10]
  • Fukagawa T [10]
  • Sekulic N [10]
  • Suskiewicz MJ [7]
  • Pool MR [6]
  • Malik D [3]
  • Deindl S [3]
  • Bacic L [3]
  • Herzog F [3]
  • Armache JP [3]
  • Dimakou D [3]
  • Ivic N [3]
  • Potocnjak M [3]
  • Bhushan S [3]
  • Sabantsev A [3]
  • Lehmann LC [3]
  • Hewitt G [3]
  • Gaullier G [3]
  • Wilson DN [3]
  • Boulton S [2]
  • Zocco M [2]
  • Boulton SJ [1]
  • Boesen T [1]
  • Pedersen JS [1]
  • Kinzy TG [1]

Journal

  • NATURE [24]
  • NAT COMMUN [16]
  • MOL CELL [15]
  • CELL RES [13]
  • NAT STRUCT MOL BIOL [13]
  • BIORXIV [10]
  • EMBO REP [9]
  • SCI REP [9]
  • ELIFE [5]
  • CELL DISCOV [2]
  • SCIENCE [1]

Software

  • RELION [23]
  • SPIDER [10]
  • CRYOSPARC [3]
  • CTFFIND [1]
  • O AND SITUS [1]
  • SITUS [1]

Microscope

  • FEI TITAN KRIOS [56]
  • TFS KRIOS [22]
  • FEI TITAN [20]
  • FEI TECNAI F30 [8]
  • FEI POLARA 300 [3]
  • FEI TALOS ARCTICA [1]
  • TFS GLACIOS [1]

Electron Source

  • FIELD EMISSION GUN [111]

Film or detector model

  • GATAN K3 BIOQUANTUM 6K X 4K [37]
  • GATAN K2 SUMMIT 4K X 4K [20]
  • FEI FALCON II 4K X 4K [19]
  • GATAN K3 6K X 4K [12]
  • FEI FALCON IV 4K X 4K [9]
  • KODAK SO-163 FILM [8]
  • GATAN K2 BASE 4K X 4K [4]
  • TVIPS TEMCAM-F416 4K X 4K [2]
  • FEI FALCON III 4K X 4K [1]

EMPIAR Experiment type

  • EMDB [2]

EMPIAR Image category

  • MICROGRAPHS - MULTIFRAME [2]
  • PICKED PARTICLES - MULTIFRAME - PROCESSED [1]
  • PICKED PARTICLES - SINGLE FRAME - PROCESSED [1]

External links

  • PDB [111]
  • AlphaFold DB [62]
  • PDBe-Kb [62]
  • UniProt [62]
  • Gene Ontology [42]
  • InterPro [42]
  • Pfam [42]
  • Complex Portal [30]
  • ChEBI [13]
  • ChEMBL [13]
  • DrugBank [13]
  • CATH [3]
  • EMPIAR [3]
  • EMDB [2]
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Showing 1 - 10 of 113. Page 1 of 12
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Preview 10 entries View All Download file
EMD-72371
Download Map
3D View
Human Oct4 bound to nucleosome reconstituted with human histones and 182 bp human LIN28B sequence
CryoEM
Release date: Jan. 28, 2026
Resolution: 6.0 Å
EM Method: Single-particle

Sinha KK, Halic M

Sci Rep (2026) 16 pp. 5704-5704 [ DOI: doi:10.1038/s41598-026-35959-8 Pubmed: 41554871 ]

EMD-49267
Download Map
3D View
SNF2H bound to nucleosome - Class E1
CryoEM
Release date: June 4, 2025
Resolution: 4.2 Å
EM Method: Single-particle

Malik D, Deshmukh A, Bilokapic S, Halic M

Cell Res (2025) 35 pp. 465-468 [ DOI: doi:10.1038/s41422-025-01103-w Pubmed: 40175616 ]

EMD-49268
Download Map
3D View
SNF2H bound to nucleosome - Class E2
CryoEM
Release date: June 4, 2025
Resolution: 3.2 Å
EM Method: Single-particle

Malik D, Deshmukh A, Bilokapic S, Halic M

Cell Res (2025) 35 pp. 465-468 [ DOI: doi:10.1038/s41422-025-01103-w Pubmed: 40175616 ]

EMD-51645
Download Map
3D View
CENP-A/H4 di-tetrasome assembled on alpha-satellite DNA.
CryoEM
Release date: Jan. 29, 2025
Resolution: 4.01 Å
EM Method: Single-particle
Fitted PDBs: 9gxa
Q-score: 0.318
Similar entry percentile: 32%

Ali-Ahmad A, Mors M, Carrer M, Li X, Bilokapic S, Halic M, Cascella M, Sekulic N

bioRxiv (2025) [ Pubmed: 39803555 DOI: doi:10.1101/2024.12.31.630874 ]

EMD-51646
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3D View
H3/H4 di-tetrasome assembled on alpha-satellite DNA closed conformation .
CryoEM
Release date: Jan. 29, 2025
Resolution: 3.82 Å
EM Method: Single-particle

Ali-Ahmad A, Mors M, Carrer M, Li X, Bilokapic S, Halic M, Cascella M, Sekulic N

bioRxiv (2025) [ Pubmed: 39803555 DOI: doi:10.1101/2024.12.31.630874 ]

EMD-51647
Download Map
3D View
H3/H4 di-tetrasome assembled on alpha-satellite DNA open conformation .
CryoEM
Release date: Jan. 29, 2025
Resolution: 3.75 Å
EM Method: Single-particle

Ali-Ahmad A, Mors M, Carrer M, Li X, Bilokapic S, Halic M, Cascella M, Sekulic N

bioRxiv (2025) [ Pubmed: 39803555 DOI: doi:10.1101/2024.12.31.630874 ]

EMD-51656
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3D View
CENP-A/H4 tetra-tetrasome assembled on 342 bp alpha-satellite DNA.
CryoEM
Release date: Jan. 29, 2025
Resolution: 7.01 Å
EM Method: Single-particle

Ali-Ahmad A, Mors M, Carrer M, Li X, Bilokapic S, Halic M, Cascella M, Sekulic N

bioRxiv (2025) [ Pubmed: 39803555 DOI: doi:10.1101/2024.12.31.630874 ]

EMD-47412
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3D View
Snf2h bound nucleosome complex - ClassA1
CryoEM
Release date: Jan. 22, 2025
Resolution: 3.15 Å
EM Method: Single-particle
Fitted PDBs: 9e1l
Q-score: 0.559
Similar entry percentile: 88%

Malik D, Deshmukh A, Bilokapic S, Halic M

Cell Res (2025) 35 pp. 465-468 [ DOI: doi:10.1038/s41422-025-01103-w Pubmed: 40175616 ]

EMD-47413
Download Map
3D View
Snf2h bound nucleosome complex - ClassA2
CryoEM
Release date: Jan. 22, 2025
Resolution: 3.25 Å
EM Method: Single-particle
Fitted PDBs: 9e1m
Q-score: 0.535
Similar entry percentile: 82%

Malik D, Deshmukh A, Bilokapic S, Halic M

Cell Res (2025) 35 pp. 465-468 [ DOI: doi:10.1038/s41422-025-01103-w Pubmed: 40175616 ]

EMD-47414
Download Map
3D View
Snf2h bound nucleosome complex-ClassA3
CryoEM
Release date: Jan. 22, 2025
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 9e1n
Q-score: 0.512
Similar entry percentile: 79%

Malik D, Deshmukh A, Bilokapic S, Halic M

Cell Res (2025) 35 pp. 465-468 [ DOI: doi:10.1038/s41422-025-01103-w Pubmed: 40175616 ]

Sort by: Download
Showing 1 - 10 of 113. Page 1 of 12
Display:
Statistics
×

Download



Preview 10 entries View All Download file

Filter By

Current Database

  • EMDB [111]
  • EMPIAR [2]

Current status

  • REL [113]

Sample type

  • Complex [111]
  • Protein [65]
  • DNA [58]
  • Ligand [14]
  • Sample [11]
  • Other [3]

Organism

  • Xenopus laevis [56]
  • Homo sapiens [54]
  • Synthetic construct [32]
  • Schizosaccharomyces pombe [12]
  • Triticum sp. [6]
  • Escherichia coli [3]
  • Chaetomium thermophilum [2]
  • (no species) [2]
  • Xenopus laevis [1]
  • Saccharomyces cerevisiae [1]
  • Canis lupus [1]
  • Canis sp. [1]

EM Method

  • Single-particle [111]

Resolution

  • ≥ 2Å and < 3Å [10]
  • ≥ 3Å and < 4Å [45]
  • ≥ 4Å and < 5Å [15]
  • ≥ 5Å and < 6Å [2]
  • ≥ 6Å and < 8Å [15]
  • ≥ 8Å and < 12Å [23]
  • ≥ 12Å and < 16Å [1]

Model molecular weight

  • 50-100 kDa [1]
  • 100-250 kDa [26]
  • 250-500 kDa [19]
  • 500-1000 kDa [1]
  • 1-2 MDa [3]
  • 2-5 MDa [12]

Release Date

  • 2026 [1]
  • 2025 [20]
  • 2023 [23]
  • 2022 [12]
  • 2021 [2]
  • 2020 [7]
  • 2019 [15]
  • 2018 [11]
  • 2017 [9]
  • 2016 [2]
  • 2010 [3]
  • 2008 [2]
  • 2007 [4]
  • 2006 [1]
  • 2004 [1]

Author by name

  • Halic M [111]
  • Bilokapic S [86]
  • Deshmukh A [28]
  • Malik D [26]
  • Ali-ahmad A [23]
  • Sekulic N [23]
  • Strauss M [20]
  • Deshmukh AA [16]
  • Ferrolino M [12]
  • Kriwacki RW [12]
  • Teague J [12]
  • Ugolini I [12]
  • White M [12]
  • Yan Y [12]
  • Zhou X [12]
  • Beckmann R [11]
  • Sinha KK [11]
  • Cai W [10]
  • Du Y [10]
  • Fierz B [10]
  • Fukagawa T [10]
  • Hirano Y [10]
  • Nagpal H [10]
  • Mielke T [9]
  • Schafer IB [9]
  • Ahel I [7]
  • Becker T [7]
  • Suskiewicz MJ [7]
  • Pool MR [6]
  • Blau M [5]
  • Gaullier G [5]
  • Sinning I [5]
  • Bacic L [4]
  • Carrer M [4]
  • Cascella M [4]
  • Deindl S [4]
  • Gartmann M [4]
  • Li X [4]
  • Mors M [4]
  • Wild K [4]
  • Armache JP [3]
  • Berninghausen O [3]
  • Bhushan S [3]
  • Brackmann K [3]
  • Dimakou D [3]
  • Herzog F [3]
  • Hewitt G [3]
  • Ivic N [3]
  • Jarasch A [3]
  • Lehmann LC [3]
  • Potocnjak M [3]
  • Sabantsev A [3]
  • Solis-mezarino V [3]
  • Spahn CM [3]
  • Wilson DN [3]
  • Boulton S [2]
  • Frank J [2]
  • Marasovic M [2]
  • Pisacane P [2]
  • Zocco M [2]
  • Anand M [1]
  • Andersen CB [1]
  • Andersen G [1]
  • Andersen GR [1]
  • Balar B [1]
  • Boesen T [1]
  • Boulton SJ [1]
  • Grassucci RA [1]
  • Kinzy TG [1]
  • Pedersen JS [1]
  • Schlenker O [1]
  • Workman JL [1]

Author by ORCID

  • Halic M [95]
  • Bilokapic S [39]
  • Strauss M [20]
  • Ali-ahmad A [19]
  • Deshmukh A [15]
  • Sekulic N [13]
  • Kriwacki RW [12]
  • Yan Y [12]
  • Hirano Y [10]
  • Cai W [10]
  • Fierz B [10]
  • Sinha KK [10]
  • Du Y [10]
  • Fukagawa T [10]
  • Sekulic N [10]
  • Suskiewicz MJ [7]
  • Pool MR [6]
  • Malik D [3]
  • Deindl S [3]
  • Bacic L [3]
  • Herzog F [3]
  • Armache JP [3]
  • Dimakou D [3]
  • Ivic N [3]
  • Potocnjak M [3]
  • Bhushan S [3]
  • Sabantsev A [3]
  • Lehmann LC [3]
  • Hewitt G [3]
  • Gaullier G [3]
  • Wilson DN [3]
  • Boulton S [2]
  • Zocco M [2]
  • Boulton SJ [1]
  • Boesen T [1]
  • Pedersen JS [1]
  • Kinzy TG [1]

Journal

  • NATURE [24]
  • NAT COMMUN [16]
  • MOL CELL [15]
  • CELL RES [13]
  • NAT STRUCT MOL BIOL [13]
  • BIORXIV [10]
  • EMBO REP [9]
  • SCI REP [9]
  • ELIFE [5]
  • CELL DISCOV [2]
  • SCIENCE [1]

Software

  • RELION [23]
  • SPIDER [10]
  • CRYOSPARC [3]
  • CTFFIND [1]
  • O AND SITUS [1]
  • SITUS [1]

Microscope

  • FEI TITAN KRIOS [56]
  • TFS KRIOS [22]
  • FEI TITAN [20]
  • FEI TECNAI F30 [8]
  • FEI POLARA 300 [3]
  • FEI TALOS ARCTICA [1]
  • TFS GLACIOS [1]

Electron Source

  • FIELD EMISSION GUN [111]

Film or detector model

  • GATAN K3 BIOQUANTUM 6K X 4K [37]
  • GATAN K2 SUMMIT 4K X 4K [20]
  • FEI FALCON II 4K X 4K [19]
  • GATAN K3 6K X 4K [12]
  • FEI FALCON IV 4K X 4K [9]
  • KODAK SO-163 FILM [8]
  • GATAN K2 BASE 4K X 4K [4]
  • TVIPS TEMCAM-F416 4K X 4K [2]
  • FEI FALCON III 4K X 4K [1]

EMPIAR Experiment type

  • EMDB [2]

EMPIAR Image category

  • MICROGRAPHS - MULTIFRAME [2]
  • PICKED PARTICLES - MULTIFRAME - PROCESSED [1]
  • PICKED PARTICLES - SINGLE FRAME - PROCESSED [1]

External links

  • PDB [111]
  • AlphaFold DB [62]
  • PDBe-Kb [62]
  • UniProt [62]
  • Gene Ontology [42]
  • InterPro [42]
  • Pfam [42]
  • Complex Portal [30]
  • ChEBI [13]
  • ChEMBL [13]
  • DrugBank [13]
  • CATH [3]
  • EMPIAR [3]
  • EMDB [2]