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author:"Hafenstein SL"

Filter By

Current Database

  • EMDB [64]

Current status

  • REL [64]

Sample type

  • Protein [54]
  • Virus [46]
  • Complex [20]
  • Ligand [12]
  • Cellular component [2]
  • RNA [1]
  • Sample [1]

Organism

  • Homo sapiens [18]
  • Canis lupus [11]
  • Protoparvovirus carnivoran1 [9]
  • Mus musculus polyomavirus 1 [6]
  • Primate erythroparvovirus 1 [6]
  • Alphapapillomavirus 9 [6]
  • Carnivore protoparvovirus 1 [4]
  • Mus musculus polyomavirus 1 [4]
  • Zika virus [3]
  • Mus musculus [2]
  • Rattus norvegicus [2]
  • Orthoflavivirus powassanense [2]
  • Enterovirus c [2]
  • Enterovirus c [2]
  • Enterovirus c [2]
  • Carnivore protoparvovirus 1 [2]
  • Enterovirus c [2]
  • Protoparvovirus carnivoran1 [2]
  • Protoparvovirus carnivoran1 [2]
  • Adeno-associated dependoparvovirus a [2]
  • Mus spretus [1]
  • (no species) [1]
  • Enterovirus c [1]
  • Acanthamoeba polyphaga mimivirus [1]
  • Mouse papillomavirus 1 [1]
  • Thermotoga maritima [1]
  • Enterogokushovirus ec6098 [1]
  • Saccharomyces cerevisiae [1]
  • Saccharomyces cerevisiae [1]
  • Orthoflavivirus powassanense [1]
  • Canis mesomelas [1]
  • Bat mastadenovirus [1]
  • Pipapillomavirus 2 [1]
  • Enterovirus c [1]

EM Method

  • Single-particle [64]

Resolution

  • < 2Å [4]
  • ≥ 2Å and < 3Å [24]
  • ≥ 3Å and < 4Å [29]
  • ≥ 4Å and < 5Å [2]
  • ≥ 6Å and < 8Å [2]
  • ≥ 8Å and < 12Å [1]
  • ≥ 16Å and < 20Å [1]
  • ≥ 30Å [1]

Model molecular weight

  • 0-50 kDa [1]
  • 50-100 kDa [2]
  • 100-250 kDa [6]
  • 250-500 kDa [9]
  • 500-1000 kDa [5]
  • 1-2 MDa [1]
  • 2-5 MDa [8]
  • 5-10 MDa [11]
  • > 10 MDa [2]

Release Date

  • 2026 [7]
  • 2025 [15]
  • 2024 [5]
  • 2023 [12]
  • 2022 [2]
  • 2021 [6]
  • 2020 [9]
  • 2019 [6]
  • 2016 [1]
  • 2009 [1]

Author by name

  • Hafenstein SL [64]
  • Bator CM [38]
  • Lee H [27]
  • Hafenstein S [26]
  • Parrish CR [22]
  • Goetschius DJ [20]
  • Cho SH [17]
  • Dinunno NM [17]
  • Charnesky AJ [15]
  • Fruh SP [14]
  • Weichert WS [14]
  • Hartmann SR [11]
  • Chumakov KM [10]
  • Faust JE [10]
  • Mahmood K [10]
  • Puligedda RD [10]
  • Adu OF [9]
  • Flyak AI [9]
  • Schoenle MV [9]
  • Subramanian S [9]
  • Christensen ND [8]
  • Bieri J [7]
  • Ros C [7]
  • Ayers KN [6]
  • Bator C [6]
  • Bywaters SM [6]
  • Cho SHJ [6]
  • Conway JF [6]
  • Dessain S [6]
  • Frost EL [6]
  • Haas DG [6]
  • Jin G [6]
  • Lauver MD [6]
  • Lukacher AE [6]
  • Makhov AM [6]
  • Netherby-winslow CS [6]
  • Rosenfeld A [6]
  • Thapa V [6]
  • Wahid R [6]
  • Ashley RE [5]
  • Assaraf R [5]
  • Dinunno N [5]
  • Goetschius D [5]
  • Jose J [5]
  • Langley CH [5]
  • Leisi R [5]
  • Lopez-astacio RA [5]
  • Narayanan A [5]
  • Callaway H [4]
  • Callaway HM [4]
  • Dessain SK [4]
  • Dong SD [4]
  • Goteschius DJ [4]
  • Huang K [4]
  • Moustafa IM [4]
  • Organtini LJ [4]
  • Waddey BT [4]
  • Cifuente JO [3]
  • Majowicz SA [3]
  • Ammann N [2]
  • Das S [2]
  • Hunziker D [2]
  • Marden JH [2]
  • Maurer AC [2]
  • Mitzel D [2]
  • Moustafa I [2]
  • Singh AK [2]
  • Suter C [2]
  • Turner KB [2]
  • Vandenberghe LH [2]
  • Wang A [2]
  • Allison AB [1]
  • Barnard KN [1]
  • Baxter AJ [1]
  • Berezin I [1]
  • Bryan JA [1]
  • Chipman PR [1]
  • Dick RA [1]
  • Fane BA [1]
  • Field CJ [1]
  • Ghedin E [1]
  • Gifford RJ [1]
  • Graff JJ [1]
  • Hackenbrack N [1]
  • Hackenbrack NM [1]
  • Heinly T [1]
  • Holmes EC [1]
  • Hu J [1]
  • Keel MK [1]
  • Kerr AE [1]
  • Kostyuchenko VA [1]
  • Krasilnikov AS [1]
  • Kubiski SV [1]
  • Kuznetsov YG [1]
  • Li D [1]
  • Lindner SE [1]
  • Luley EH [1]
  • Mcpherson A [1]
  • Minns AM [1]
  • Mostafa IM [1]

Author by ORCID

  • Hafenstein SL [30]
  • Goetschius DJ [20]
  • Parrish CR [19]
  • Lee H [16]
  • Hartmann SR [10]
  • Faust JE [10]
  • Ayers KN [6]
  • Conway JF [6]
  • Lauver MD [6]
  • Lukacher AE [6]
  • Cho SH [6]
  • Leisi R [5]
  • Bieri J [5]
  • Goetschius D [5]
  • Ros C [5]
  • Lopez-astacio RA [5]
  • Jose J [5]
  • Assaraf R [5]
  • Langley CH [5]
  • Organtini LJ [4]
  • Huang K [4]
  • Makhov AM [4]
  • Cifuente JO [3]
  • Majowicz SA [3]
  • Narayanan A [3]
  • Vandenberghe LH [2]
  • Das S [2]
  • Maurer AC [2]
  • Mitzel D [2]
  • Xiao C [1]
  • Li D [1]
  • Hu J [1]
  • Krasilnikov AS [1]
  • Holmes EC [1]
  • Kostyuchenko VA [1]
  • Raoult D [1]
  • Ghedin E [1]
  • Hackenbrack N [1]
  • Fane BA [1]
  • Moustafa IM [1]
  • Bator CM [1]
  • Sutton TC [1]
  • Allison AB [1]
  • Lindner SE [1]
  • Chipman PR [1]
  • Gifford RJ [1]

Journal

  • NAT COMMUN [20]
  • PNAS [16]
  • ELIFE [6]
  • COMMUN BIOL [5]
  • TO BE PUBLISHED [5]
  • J VIROL [3]
  • HUM GENE THER [2]
  • SCI ADV [2]
  • BIORXIV [1]
  • NPJ VIRUSES [1]
  • PLOS BIOL [1]
  • SCI REP [1]
  • SCIENCE [1]
  • VIRUSES [1]

Software

  • CRYOSPARC [8]
  • RELION [8]
  • GCTF [2]
  • AUTO3DEM [1]
  • FREALIGN [1]

Microscope

  • FEI TITAN KRIOS [39]
  • TFS KRIOS [16]
  • FEI TALOS ARCTICA [4]
  • FEI TECNAI ARCTICA [2]
  • FEI POLARA 300 [1]
  • FEI/PHILIPS CM300FEG/T [1]
  • JEOL 2100 [1]

Electron Source

  • FIELD EMISSION GUN [63]
  • LAB6 [1]

Film or detector model

  • FEI FALCON III 4K X 4K [46]
  • FEI FALCON IV 4K X 4K [9]
  • GATAN K3 6K X 4K [3]
  • FEI FALCON II 4K X 4K [2]
  • GATAN K3 BIOCONTINUUM 6K X 4K [2]
  • GATAN ULTRASCAN 4000 4K X 4K [1]
  • KODAK SO-163 FILM [1]

External links

  • PDB [64]
  • UniProt [50]
  • PDBe-Kb [40]
  • Gene Ontology [26]
  • InterPro [25]
  • AlphaFold DB [22]
  • ChEBI [12]
  • ChEMBL [11]
  • DrugBank [10]
  • Pfam [10]
  • SCOP2 [3]
  • Complex Portal [1]
Sort by: Download
Showing 1 - 10 of 64. Page 1 of 7
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Preview first 10
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EMD-75944
Download Map
3D View
Human transferrin receptor ectodomain
CryoEM
Release date: May 27, 2026
Resolution: 2.4 Å
EM Method: Single-particle
Fitted PDBs: 11qc
Q-score: 0.647

Lee H, Bieri J, Ammann N, Suter C, Hunziker D, Singh AK, Hafenstein SL, Ros C

Nat Commun (2026) [ ]

EMD-75980
Download Map
3D View
Complex of B19V VP1u RBD and human transferrin receptor ectodomain
CryoEM
Release date: May 27, 2026
Resolution: 2.4 Å
EM Method: Single-particle
Fitted PDBs: 11rn
Q-score: 0.622

Lee H, Bieri J, Ammann N, Suter C, Hunziker D, Singh AK, Hafenstein SL, Ros C

Nat Commun (2026) [ ]

EMD-70163
Download Map
3D View
Subparticle map of HPV16 pentavalent capsomer
Focused map
CryoEM
Release date: May 6, 2026
Resolution: 1.9 Å
EM Method: Single-particle

Langley CH, Hafenstein SL

To Be Published

EMD-70164
Download Map
3D View
Subparticle map of HPV16 hexavalent capsomer
CryoEM
Focused map
Release date: May 6, 2026
Resolution: 1.92 Å
EM Method: Single-particle

Langley CH, Hafenstein SL

To Be Published

EMD-70167
Download Map
3D View
Subparticle map of HPV16 hexavalent capsomer
Consensus map
CryoEM
Release date: May 6, 2026
Resolution: 2.42 Å
EM Method: Single-particle

Langley CH, Hafenstein SL

To Be Published

EMD-70186
Download Map
3D View
HPV16 capsid bound to heparin
CryoEM
Release date: May 6, 2026
Resolution: 2.76 Å
EM Method: Single-particle

Langley CH, Hafenstein SL

To Be Published

EMD-49960
Download Map
3D View
Atomic resolution cryoEM structure of HPV16 bound to heparin
Composite map
CryoEM
Release date: April 29, 2026
Resolution: 1.9 Å
EM Method: Single-particle
Fitted PDBs: 9nzu
Q-score: 0.785

Langley CH, Hafenstein SL

To Be Published

EMD-70318
Download Map
3D View
PV2-10D2 Complex
CryoEM
Release date: Dec. 17, 2025
Resolution: 3.65 Å
EM Method: Single-particle
Fitted PDBs: 9ocl
Q-score: 0.477

Waddey BT, Charnesky AJ, Faust JE, DiNunno NM, Puligedda RD, Cho SH, Bator CM, Dong SD, Mahmood K, Chumakov KM, Dessain SK, Hafenstein SL

Nat Commun (2026) 17 pp. 1512-1512 [ Pubmed: 41484135 DOI: doi:10.1038/s41467-025-68226-x ]

EMD-70320
Download Map
3D View
SIPV3-2E1 Complex
CryoEM
Release date: Dec. 17, 2025
Resolution: 2.95 Å
EM Method: Single-particle
Fitted PDBs: 9oco
Q-score: 0.55

Waddey BT, Charnesky AJ, Faust JE, DiNunno NM, Puligedda RD, Cho SH, Bator CM, Dong SD, Mahmood K, Chumakov KM, Dessain SK, Hafenstein SL

Nat Commun (2026) 17 pp. 1512-1512 [ Pubmed: 41484135 DOI: doi:10.1038/s41467-025-68226-x ]

EMD-70339
Download Map
3D View
SIPV3-6B5 Complex
CryoEM
Release date: Dec. 17, 2025
Resolution: 2.94 Å
EM Method: Single-particle
Fitted PDBs: 9od3
Q-score: 0.574

Waddey BT, Charnesky AJ, Faust JE, DiNunno NM, Puligedda RD, Cho SH, Bator CM, Dong SD, Mahmood K, Chumakov KM, Dessain SK, Hafenstein SL

Nat Commun (2026) 17 pp. 1512-1512 [ Pubmed: 41484135 DOI: doi:10.1038/s41467-025-68226-x ]

Sort by: Download
Showing 1 - 10 of 64. Page 1 of 7
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [64]

Current status

  • REL [64]

Sample type

  • Protein [54]
  • Virus [46]
  • Complex [20]
  • Ligand [12]
  • Cellular component [2]
  • RNA [1]
  • Sample [1]

Organism

  • Homo sapiens [18]
  • Canis lupus [11]
  • Protoparvovirus carnivoran1 [9]
  • Mus musculus polyomavirus 1 [6]
  • Primate erythroparvovirus 1 [6]
  • Alphapapillomavirus 9 [6]
  • Carnivore protoparvovirus 1 [4]
  • Mus musculus polyomavirus 1 [4]
  • Zika virus [3]
  • Mus musculus [2]
  • Rattus norvegicus [2]
  • Orthoflavivirus powassanense [2]
  • Enterovirus c [2]
  • Enterovirus c [2]
  • Enterovirus c [2]
  • Carnivore protoparvovirus 1 [2]
  • Enterovirus c [2]
  • Protoparvovirus carnivoran1 [2]
  • Protoparvovirus carnivoran1 [2]
  • Adeno-associated dependoparvovirus a [2]
  • Mus spretus [1]
  • (no species) [1]
  • Enterovirus c [1]
  • Acanthamoeba polyphaga mimivirus [1]
  • Mouse papillomavirus 1 [1]
  • Thermotoga maritima [1]
  • Enterogokushovirus ec6098 [1]
  • Saccharomyces cerevisiae [1]
  • Saccharomyces cerevisiae [1]
  • Orthoflavivirus powassanense [1]
  • Canis mesomelas [1]
  • Bat mastadenovirus [1]
  • Pipapillomavirus 2 [1]
  • Enterovirus c [1]

EM Method

  • Single-particle [64]

Resolution

  • < 2Å [4]
  • ≥ 2Å and < 3Å [24]
  • ≥ 3Å and < 4Å [29]
  • ≥ 4Å and < 5Å [2]
  • ≥ 6Å and < 8Å [2]
  • ≥ 8Å and < 12Å [1]
  • ≥ 16Å and < 20Å [1]
  • ≥ 30Å [1]

Model molecular weight

  • 0-50 kDa [1]
  • 50-100 kDa [2]
  • 100-250 kDa [6]
  • 250-500 kDa [9]
  • 500-1000 kDa [5]
  • 1-2 MDa [1]
  • 2-5 MDa [8]
  • 5-10 MDa [11]
  • > 10 MDa [2]

Release Date

  • 2026 [7]
  • 2025 [15]
  • 2024 [5]
  • 2023 [12]
  • 2022 [2]
  • 2021 [6]
  • 2020 [9]
  • 2019 [6]
  • 2016 [1]
  • 2009 [1]

Author by name

  • Hafenstein SL [64]
  • Bator CM [38]
  • Lee H [27]
  • Hafenstein S [26]
  • Parrish CR [22]
  • Goetschius DJ [20]
  • Cho SH [17]
  • Dinunno NM [17]
  • Charnesky AJ [15]
  • Fruh SP [14]
  • Weichert WS [14]
  • Hartmann SR [11]
  • Chumakov KM [10]
  • Faust JE [10]
  • Mahmood K [10]
  • Puligedda RD [10]
  • Adu OF [9]
  • Flyak AI [9]
  • Schoenle MV [9]
  • Subramanian S [9]
  • Christensen ND [8]
  • Bieri J [7]
  • Ros C [7]
  • Ayers KN [6]
  • Bator C [6]
  • Bywaters SM [6]
  • Cho SHJ [6]
  • Conway JF [6]
  • Dessain S [6]
  • Frost EL [6]
  • Haas DG [6]
  • Jin G [6]
  • Lauver MD [6]
  • Lukacher AE [6]
  • Makhov AM [6]
  • Netherby-winslow CS [6]
  • Rosenfeld A [6]
  • Thapa V [6]
  • Wahid R [6]
  • Ashley RE [5]
  • Assaraf R [5]
  • Dinunno N [5]
  • Goetschius D [5]
  • Jose J [5]
  • Langley CH [5]
  • Leisi R [5]
  • Lopez-astacio RA [5]
  • Narayanan A [5]
  • Callaway H [4]
  • Callaway HM [4]
  • Dessain SK [4]
  • Dong SD [4]
  • Goteschius DJ [4]
  • Huang K [4]
  • Moustafa IM [4]
  • Organtini LJ [4]
  • Waddey BT [4]
  • Cifuente JO [3]
  • Majowicz SA [3]
  • Ammann N [2]
  • Das S [2]
  • Hunziker D [2]
  • Marden JH [2]
  • Maurer AC [2]
  • Mitzel D [2]
  • Moustafa I [2]
  • Singh AK [2]
  • Suter C [2]
  • Turner KB [2]
  • Vandenberghe LH [2]
  • Wang A [2]
  • Allison AB [1]
  • Barnard KN [1]
  • Baxter AJ [1]
  • Berezin I [1]
  • Bryan JA [1]
  • Chipman PR [1]
  • Dick RA [1]
  • Fane BA [1]
  • Field CJ [1]
  • Ghedin E [1]
  • Gifford RJ [1]
  • Graff JJ [1]
  • Hackenbrack N [1]
  • Hackenbrack NM [1]
  • Heinly T [1]
  • Holmes EC [1]
  • Hu J [1]
  • Keel MK [1]
  • Kerr AE [1]
  • Kostyuchenko VA [1]
  • Krasilnikov AS [1]
  • Kubiski SV [1]
  • Kuznetsov YG [1]
  • Li D [1]
  • Lindner SE [1]
  • Luley EH [1]
  • Mcpherson A [1]
  • Minns AM [1]
  • Mostafa IM [1]

Author by ORCID

  • Hafenstein SL [30]
  • Goetschius DJ [20]
  • Parrish CR [19]
  • Lee H [16]
  • Hartmann SR [10]
  • Faust JE [10]
  • Ayers KN [6]
  • Conway JF [6]
  • Lauver MD [6]
  • Lukacher AE [6]
  • Cho SH [6]
  • Leisi R [5]
  • Bieri J [5]
  • Goetschius D [5]
  • Ros C [5]
  • Lopez-astacio RA [5]
  • Jose J [5]
  • Assaraf R [5]
  • Langley CH [5]
  • Organtini LJ [4]
  • Huang K [4]
  • Makhov AM [4]
  • Cifuente JO [3]
  • Majowicz SA [3]
  • Narayanan A [3]
  • Vandenberghe LH [2]
  • Das S [2]
  • Maurer AC [2]
  • Mitzel D [2]
  • Xiao C [1]
  • Li D [1]
  • Hu J [1]
  • Krasilnikov AS [1]
  • Holmes EC [1]
  • Kostyuchenko VA [1]
  • Raoult D [1]
  • Ghedin E [1]
  • Hackenbrack N [1]
  • Fane BA [1]
  • Moustafa IM [1]
  • Bator CM [1]
  • Sutton TC [1]
  • Allison AB [1]
  • Lindner SE [1]
  • Chipman PR [1]
  • Gifford RJ [1]

Journal

  • NAT COMMUN [20]
  • PNAS [16]
  • ELIFE [6]
  • COMMUN BIOL [5]
  • TO BE PUBLISHED [5]
  • J VIROL [3]
  • HUM GENE THER [2]
  • SCI ADV [2]
  • BIORXIV [1]
  • NPJ VIRUSES [1]
  • PLOS BIOL [1]
  • SCI REP [1]
  • SCIENCE [1]
  • VIRUSES [1]

Software

  • CRYOSPARC [8]
  • RELION [8]
  • GCTF [2]
  • AUTO3DEM [1]
  • FREALIGN [1]

Microscope

  • FEI TITAN KRIOS [39]
  • TFS KRIOS [16]
  • FEI TALOS ARCTICA [4]
  • FEI TECNAI ARCTICA [2]
  • FEI POLARA 300 [1]
  • FEI/PHILIPS CM300FEG/T [1]
  • JEOL 2100 [1]

Electron Source

  • FIELD EMISSION GUN [63]
  • LAB6 [1]

Film or detector model

  • FEI FALCON III 4K X 4K [46]
  • FEI FALCON IV 4K X 4K [9]
  • GATAN K3 6K X 4K [3]
  • FEI FALCON II 4K X 4K [2]
  • GATAN K3 BIOCONTINUUM 6K X 4K [2]
  • GATAN ULTRASCAN 4000 4K X 4K [1]
  • KODAK SO-163 FILM [1]

External links

  • PDB [64]
  • UniProt [50]
  • PDBe-Kb [40]
  • Gene Ontology [26]
  • InterPro [25]
  • AlphaFold DB [22]
  • ChEBI [12]
  • ChEMBL [11]
  • DrugBank [10]
  • Pfam [10]
  • SCOP2 [3]
  • Complex Portal [1]