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author:"Guerrero-Ferreira R"

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Current Database

  • EMDB [13]
  • EMPIAR [2]

Current status

  • REL [15]

Sample type

  • Complex [13]
  • Protein [13]
  • Ligand [2]

Organism

  • Homo sapiens [12]
  • Salmonella enterica [1]

EM Method

  • Helical reconstruction [12]
  • Single-particle [1]

Resolution

  • ≥ 2Å and < 3Å [5]
  • ≥ 3Å and < 4Å [8]

Model molecular weight

  • 50-100 kDa [1]
  • 100-250 kDa [10]

Release Date

  • 2024 [7]
  • 2021 [1]
  • 2020 [1]
  • 2019 [4]
  • 2018 [2]

Author by name

  • Guerrero-ferreira R [15]
  • Riek R [14]
  • Britschgi M [7]
  • Frey L [7]
  • Ghosh D [7]
  • Greenwald J [7]
  • Kwiatkowski W [7]
  • Lauer ME [7]
  • Mona D [7]
  • Picotti P [7]
  • Pokharna A [7]
  • Qureshi BM [7]
  • Rhyner D [7]
  • Ringler P [7]
  • Serdiuk T [7]
  • Stahlberg H [7]
  • Taylor NM [7]
  • Arteni AA [5]
  • Bousset L [5]
  • Kumari P [5]
  • Makky A [5]
  • Meier BH [5]
  • Melki R [5]
  • Taylor NMI [5]
  • Verasdonck J [5]
  • Bockmann A [4]
  • Böckmann A [1]
  • Dunham CM [1]
  • Ibba M [1]
  • Juneja P [1]
  • Pavelich IJ [1]
  • Srinivas P [1]
  • Steiner RE [1]

Author by ORCID

  • Guerrero-ferreira R [13]
  • Pokharna A [7]
  • Picotti P [7]
  • Greenwald J [7]
  • Britschgi M [5]
  • Stahlberg H [5]
  • Riek R [5]
  • Taylor NM [5]
  • Lauer ME [5]
  • Ringler P [5]
  • Arteni AA [4]
  • Bockmann A [4]
  • Bousset L [4]
  • Makky A [4]
  • Kumari P [4]
  • Meier BH [4]
  • Srinivas P [1]
  • Dunham CM [1]

Journal

  • ELIFE [14]
  • BIORXIV [2]
  • NUCLEIC ACIDS RES [1]

Software

  • RELION [13]
  • COOT [4]
  • GCTF [1]

Microscope

  • FEI TITAN KRIOS [12]
  • FEI TALOS ARCTICA [1]

Electron Source

  • FIELD EMISSION GUN [13]

Film or detector model

  • GATAN K3 BIOQUANTUM 6K X 4K [7]
  • GATAN K2 SUMMIT 4K X 4K [6]

EMPIAR Experiment type

  • EMDB [2]

EMPIAR Image category

  • MICROGRAPHS - MULTIFRAME [1]
  • MICROGRAPHS - SINGLE FRAME [1]

External links

  • AlphaFold DB [13]
  • PDB [13]
  • PDBe-Kb [13]
  • UniProt [13]
  • Complex Portal [12]
  • Gene Ontology [11]
  • InterPro [11]
  • Pfam [10]
  • ChEBI [2]
  • ChEMBL [2]
  • DrugBank [2]
  • EMDB [2]
  • EMPIAR [2]
  • SCOP2 [1]
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EMD-50860
Download Map
3D View
Cryo EM map of the type 2A polymorph of alpha-synuclein at pH 7.0.
CryoEM
Release date: July 17, 2024
Resolution: 2.86 Å
EM Method: Helical reconstruction

Frey L, Ghosh D, Qureshi BM, Rhyner D, Guerrero-Ferreira R, Pokharna A, Kwiatkowski W, Serdiuk T, Picotti P, Riek R, Greenwald J

eLife (2024) 12 [ Pubmed: 39196271 DOI: doi:10.7554/eLife.93562 ]

EMD-50888
Download Map
3D View
Cryo EM structure of the type 3B polymorph of alpha-synuclein at low pH.
CryoEM
Release date: July 17, 2024
Resolution: 2.23 Å
EM Method: Helical reconstruction
Fitted PDBs: 9fyp
Q-score: 0.67
Similar entry percentile: 85%

Frey L, Ghosh D, Qureshi BM, Rhyner D, Guerrero-Ferreira R, Pokharna A, Kwiatkowski W, Serdiuk T, Picotti P, Riek R, Greenwald J

eLife (2024) 12 [ Pubmed: 39196271 DOI: doi:10.7554/eLife.93562 ]

EMD-17693
Download Map
3D View
Cryo EM structure of the type 3C polymorph of alpha-synuclein at low pH.
CryoEM
Release date: May 29, 2024
Resolution: 3.41 Å
EM Method: Helical reconstruction
Fitted PDBs: 8pix
Q-score: 0.532
Similar entry percentile: 89%

Frey L, Ghosh D, Qureshi BM, Rhyner D, Guerrero-Ferreira R, Pokharna A, Kwiatkowski W, Serdiuk T, Picotti P, Riek R, Greenwald J

eLife (2024) 12 [ Pubmed: 39196271 DOI: doi:10.7554/eLife.93562 ]

EMD-17714
Download Map
3D View
Cryo EM structure of the type 3D polymorph of alpha-synuclein E46K mutant at low pH.
CryoEM
Release date: May 29, 2024
Resolution: 2.31 Å
EM Method: Helical reconstruction
Fitted PDBs: 8pjo
Q-score: 0.672
Similar entry percentile: 89%

Frey L, Ghosh D, Qureshi BM, Rhyner D, Guerrero-Ferreira R, Pokharna A, Kwiatkowski W, Serdiuk T, Picotti P, Riek R, Greenwald J

eLife (2024) 12 [ Pubmed: 39196271 DOI: doi:10.7554/eLife.93562 ]

EMD-17723
Download Map
3D View
Cryo EM structure of the type 1m polymorph of alpha-synuclein
CryoEM
Release date: May 29, 2024
Resolution: 3.26 Å
EM Method: Helical reconstruction
Fitted PDBs: 8pk2
Q-score: 0.542
Similar entry percentile: 85%

Frey L, Ghosh D, Qureshi BM, Rhyner D, Guerrero-Ferreira R, Pokharna A, Kwiatkowski W, Serdiuk T, Picotti P, Riek R, Greenwald J

eLife (2024) 12 [ Pubmed: 39196271 DOI: doi:10.7554/eLife.93562 ]

EMD-17726
Download Map
3D View
Cryo EM structure of the type 5A polymorph of alpha-synuclein.
CryoEM
Release date: May 29, 2024
Resolution: 3.3 Å
EM Method: Helical reconstruction
Fitted PDBs: 8pk4
Q-score: 0.541
Similar entry percentile: 86%

Frey L, Ghosh D, Qureshi BM, Rhyner D, Guerrero-Ferreira R, Pokharna A, Kwiatkowski W, Serdiuk T, Picotti P, Riek R, Greenwald J

eLife (2024) 12 [ Pubmed: 39196271 DOI: doi:10.7554/eLife.93562 ]

EMD-50077
Download Map
3D View
Cryo EM map of the type 2B polymorph of alpha-synuclein at pH 7.0.
CryoEM
Release date: May 29, 2024
Resolution: 2.95 Å
EM Method: Helical reconstruction

Frey L, Ghosh D, Qureshi BM, Rhyner D, Guerrero-Ferreira R, Pokharna A, Kwiatkowski W, Serdiuk T, Picotti P, Riek R, Greenwald J

eLife (2024) 12 [ Pubmed: 39196271 DOI: doi:10.7554/eLife.93562 ]

EMD-24249
Download Map
3D View
Oxidized PheRS G318W from Salmonella enterica serovar Typhimurium
CryoEM
Release date: Oct. 6, 2021
Resolution: 3.65 Å
EM Method: Single-particle
Fitted PDBs: 7n8y
Q-score: 0.433
Similar entry percentile: 56%

Srinivas P, Steiner RE, Pavelich IJ, Guerrero-Ferreira R, Juneja P, Ibba M, Dunham CM

Nucleic Acids Res (2021) 49 pp. 11800-11809 [ Pubmed: 34581811 DOI: doi:10.1093/nar/gkab856 ]

EMPIAR-10323
Related EMDB
EMD-10305 EMD-10307
Two new polymorphic structures of human full-length alpha-synuclein fibrils solved by cryo-electron microscopy
Release date: March 4, 2020
Dataset size: 90.9 GB
Experiment type: EMDB

Guerrero-Ferreira R, Taylor NM, Arteni AA, Kumari P, Mona D, Ringler P, Britschgi M, Lauer ME, Makky A, Verasdonck J, Riek R, Melki R, Meier BH, Böckmann A, Bousset L, Stahlberg H

Elife (2019) 8 [ Pubmed: 31815671 DOI: 10.7554/eLife.48907 ]

Image sets:
  • Aligned micrographs of alpha-synuclein fibrils
EMD-10305
Download Map
3D View
Raw data
EMPIAR-10323
cryo-em structure of alpha-synuclein fibril polymorph 2B
CryoEM
Release date: Dec. 18, 2019
Resolution: 3.4 Å
EM Method: Helical reconstruction
Fitted PDBs: 6sst
Q-score: 0.511
Similar entry percentile: 79%

Guerrero-Ferreira R, Taylor NM, Arteni AA, Kumari P, Mona D, Ringler P, Britschgi M, Lauer ME, Makky A, Verasdonck J, Riek R, Melki R, Meier BH, Bockmann A, Bousset L, Stahlberg H

eLife (2019) 8 [ DOI: doi:10.7554/eLife.48907 Pubmed: 31815671 ]

Sort by: Download
Showing 1 - 10 of 15. Page 1 of 2
Display:
Statistics
×

Download



Preview 10 entries View All Download file

Filter By

Current Database

  • EMDB [13]
  • EMPIAR [2]

Current status

  • REL [15]

Sample type

  • Complex [13]
  • Protein [13]
  • Ligand [2]

Organism

  • Homo sapiens [12]
  • Salmonella enterica [1]

EM Method

  • Helical reconstruction [12]
  • Single-particle [1]

Resolution

  • ≥ 2Å and < 3Å [5]
  • ≥ 3Å and < 4Å [8]

Model molecular weight

  • 50-100 kDa [1]
  • 100-250 kDa [10]

Release Date

  • 2024 [7]
  • 2021 [1]
  • 2020 [1]
  • 2019 [4]
  • 2018 [2]

Author by name

  • Guerrero-ferreira R [15]
  • Riek R [14]
  • Britschgi M [7]
  • Frey L [7]
  • Ghosh D [7]
  • Greenwald J [7]
  • Kwiatkowski W [7]
  • Lauer ME [7]
  • Mona D [7]
  • Picotti P [7]
  • Pokharna A [7]
  • Qureshi BM [7]
  • Rhyner D [7]
  • Ringler P [7]
  • Serdiuk T [7]
  • Stahlberg H [7]
  • Taylor NM [7]
  • Arteni AA [5]
  • Bousset L [5]
  • Kumari P [5]
  • Makky A [5]
  • Meier BH [5]
  • Melki R [5]
  • Taylor NMI [5]
  • Verasdonck J [5]
  • Bockmann A [4]
  • Böckmann A [1]
  • Dunham CM [1]
  • Ibba M [1]
  • Juneja P [1]
  • Pavelich IJ [1]
  • Srinivas P [1]
  • Steiner RE [1]

Author by ORCID

  • Guerrero-ferreira R [13]
  • Pokharna A [7]
  • Picotti P [7]
  • Greenwald J [7]
  • Britschgi M [5]
  • Stahlberg H [5]
  • Riek R [5]
  • Taylor NM [5]
  • Lauer ME [5]
  • Ringler P [5]
  • Arteni AA [4]
  • Bockmann A [4]
  • Bousset L [4]
  • Makky A [4]
  • Kumari P [4]
  • Meier BH [4]
  • Srinivas P [1]
  • Dunham CM [1]

Journal

  • ELIFE [14]
  • BIORXIV [2]
  • NUCLEIC ACIDS RES [1]

Software

  • RELION [13]
  • COOT [4]
  • GCTF [1]

Microscope

  • FEI TITAN KRIOS [12]
  • FEI TALOS ARCTICA [1]

Electron Source

  • FIELD EMISSION GUN [13]

Film or detector model

  • GATAN K3 BIOQUANTUM 6K X 4K [7]
  • GATAN K2 SUMMIT 4K X 4K [6]

EMPIAR Experiment type

  • EMDB [2]

EMPIAR Image category

  • MICROGRAPHS - MULTIFRAME [1]
  • MICROGRAPHS - SINGLE FRAME [1]

External links

  • AlphaFold DB [13]
  • PDB [13]
  • PDBe-Kb [13]
  • UniProt [13]
  • Complex Portal [12]
  • Gene Ontology [11]
  • InterPro [11]
  • Pfam [10]
  • ChEBI [2]
  • ChEMBL [2]
  • DrugBank [2]
  • EMDB [2]
  • EMPIAR [2]
  • SCOP2 [1]