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author:"Gorniak I"

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Current Database

  • EMDB [12]

Current status

  • REL [12]

Sample type

  • Complex [12]
  • Protein [12]
  • Ligand [9]

Organism

  • Aquifex aeolicus [6]
  • Paramecium bursaria chlorella virus 1 [3]
  • Paramecium bursaria chlorella virus cz-2 [3]
  • Xenopus laevis [3]
  • Homo sapiens [3]
  • Lama glama [3]

EM Method

  • Single-particle [12]

Resolution

  • ≥ 3Å and < 4Å [11]
  • ≥ 4Å and < 5Å [1]

Model molecular weight

  • 50-100 kDa [3]
  • 100-250 kDa [9]

Release Date

  • 2024 [6]
  • 2022 [6]

Author by name

  • Gorniak I [12]
  • Zimmer J [12]
  • Azadi P [6]
  • Erramilli SK [6]
  • Gawda T [6]
  • Hahn D [6]
  • Kossiakoff AA [6]
  • Muszynski A [6]
  • Spellmon N [6]
  • Stephens Z [6]
  • Vlach J [6]

Author by ORCID

  • Zimmer J [12]
  • Gorniak I [12]
  • Gawda T [6]
  • Vlach J [6]
  • Spellmon N [6]
  • Kossiakoff AA [6]
  • Muszynski A [6]

Journal

  • NAT COMMUN [6]
  • NAT STRUCT MOL BIOL [6]

Software

  • CRYOSPARC [9]

Microscope

  • FEI TITAN KRIOS [12]

Electron Source

  • FIELD EMISSION GUN [12]

Film or detector model

  • GATAN K3 6K X 4K [12]

External links

  • PDB [12]
  • UniProt [12]
  • AlphaFold DB [9]
  • Gene Ontology [9]
  • InterPro [9]
  • PDBe-Kb [9]
  • Pfam [9]
  • ChEBI [8]
  • ChEMBL [8]
  • DrugBank [8]
  • EMPIAR [8]
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Showing 1 - 10 of 12. Page 1 of 2
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EMD-40591
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Xenopus laevis hyaluronan synthase 1
CryoEM
Release date: May 1, 2024
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8smm
Q-score: 0.504
Similar entry percentile: 66%

Gorniak I, Stephens Z, Erramilli SK, Gawda T, Kossiakoff AA, Zimmer J

Nat Struct Mol Biol (2025) 32 pp. 161-171 [ Pubmed: 39322765 DOI: doi:10.1038/s41594-024-01389-1 ]

EMD-40594
Download Map
3D View
Xenopus laevis hyaluronan synthase 1, nascent HA polymer bound state
CryoEM
Release date: May 1, 2024
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8smn
Q-score: 0.557
Similar entry percentile: 88%

Gorniak I, Stephens Z, Erramilli SK, Gawda T, Kossiakoff AA, Zimmer J

Nat Struct Mol Biol (2025) 32 pp. 161-171 [ Pubmed: 39322765 DOI: doi:10.1038/s41594-024-01389-1 ]

EMD-40598
Download Map
3D View
Xenopus laevis hyaluronan synthase 1, UDP-bound, gating loop inserted state
CryoEM
Release date: May 1, 2024
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 8smp
Q-score: 0.511
Similar entry percentile: 79%

Gorniak I, Stephens Z, Erramilli SK, Gawda T, Kossiakoff AA, Zimmer J

Nat Struct Mol Biol (2025) 32 pp. 161-171 [ Pubmed: 39322765 DOI: doi:10.1038/s41594-024-01389-1 ]

EMD-40622
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Raw data
EMPIAR-13328
Chlorella virus Hyaluronan Synthase bound to GlcA extended GlcNAc primer
CryoEM
Release date: May 1, 2024
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8snc
Q-score: 0.509
Similar entry percentile: 68%

Gorniak I, Stephens Z, Erramilli SK, Gawda T, Kossiakoff AA, Zimmer J

Nat Struct Mol Biol (2025) 32 pp. 161-171 [ Pubmed: 39322765 DOI: doi:10.1038/s41594-024-01389-1 ]

EMD-40623
Download Map
3D View
Raw data
EMPIAR-13334
Chlorella virus Hyaluronan Synthase bound to GlcNAc primer and UDP-GlcA
CryoEM
Release date: May 1, 2024
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8snd
Q-score: 0.512
Similar entry percentile: 65%

Gorniak I, Stephens Z, Erramilli SK, Gawda T, Kossiakoff AA, Zimmer J

Nat Struct Mol Biol (2025) 32 pp. 161-171 [ Pubmed: 39322765 DOI: doi:10.1038/s41594-024-01389-1 ]

EMD-40624
Download Map
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Raw data
EMPIAR-13337
Chlorella virus Hyaluronan Synthase bound to GlcA extended GlcNAc primer and UDP
CryoEM
Release date: May 1, 2024
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 8sne
Q-score: 0.546
Similar entry percentile: 77%

Gorniak I, Stephens Z, Erramilli SK, Gawda T, Kossiakoff AA, Zimmer J

Nat Struct Mol Biol (2025) 32 pp. 161-171 [ Pubmed: 39322765 DOI: doi:10.1038/s41594-024-01389-1 ]

EMD-27491
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Raw data
EMPIAR-11192
CryoEM structure of the A. aeolicus WzmWzt transporter bound to the native O antigen
CryoEM
Release date: Sept. 21, 2022
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8dku
Q-score: 0.482
Similar entry percentile: 55%

Spellmon N, Muszynski A, Gorniak I, Vlach J, Hahn D, Azadi P, Zimmer J

Nat Commun (2022) 13 pp. 5226-5226 [ DOI: doi:10.1038/s41467-022-32597-2 Pubmed: 36064941 ]

EMD-27494
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Raw data
EMPIAR-11196
CryoEM structure of the nucleotide-free and open channel A.aeolicus WzmWzt transporter
CryoEM
Release date: Sept. 21, 2022
Resolution: 4.1 Å
EM Method: Single-particle
Fitted PDBs: 8dl0
Q-score: 0.307
Similar entry percentile: 31%

Spellmon N, Muszynski A, Gorniak I, Vlach J, Hahn D, Azadi P, Zimmer J

Nat Commun (2022) 13 pp. 5226-5226 [ DOI: doi:10.1038/s41467-022-32597-2 Pubmed: 36064941 ]

EMD-27556
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Raw data
EMPIAR-11197
CryoEM structure of the A. aeolicus WzmWzt transporter bound to 3-O-methyl-D-mannose
CryoEM
Release date: Sept. 21, 2022
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 8dn8
Q-score: 0.394
Similar entry percentile: 41%

Spellmon N, Muszynski A, Gorniak I, Vlach J, Hahn D, Azadi P, Zimmer J

Nat Commun (2022) 13 pp. 5226-5226 [ DOI: doi:10.1038/s41467-022-32597-2 Pubmed: 36064941 ]

EMD-27563
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3D View
Raw data
EMPIAR-11202
CryoEM structure of the A. aeolicus WzmWzt transporter bound to the native O antigen and ADP
CryoEM
Release date: Sept. 21, 2022
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 8dnc
Q-score: 0.464
Similar entry percentile: 52%

Spellmon N, Muszynski A, Gorniak I, Vlach J, Hahn D, Azadi P, Zimmer J

Nat Commun (2022) 13 pp. 5226-5226 [ DOI: doi:10.1038/s41467-022-32597-2 Pubmed: 36064941 ]

Sort by: Download
Showing 1 - 10 of 12. Page 1 of 2
Display:
Statistics
×

Download


Preview 10 entries View All Download file

Filter By

Current Database

  • EMDB [12]

Current status

  • REL [12]

Sample type

  • Complex [12]
  • Protein [12]
  • Ligand [9]

Organism

  • Aquifex aeolicus [6]
  • Paramecium bursaria chlorella virus 1 [3]
  • Paramecium bursaria chlorella virus cz-2 [3]
  • Xenopus laevis [3]
  • Homo sapiens [3]
  • Lama glama [3]

EM Method

  • Single-particle [12]

Resolution

  • ≥ 3Å and < 4Å [11]
  • ≥ 4Å and < 5Å [1]

Model molecular weight

  • 50-100 kDa [3]
  • 100-250 kDa [9]

Release Date

  • 2024 [6]
  • 2022 [6]

Author by name

  • Gorniak I [12]
  • Zimmer J [12]
  • Azadi P [6]
  • Erramilli SK [6]
  • Gawda T [6]
  • Hahn D [6]
  • Kossiakoff AA [6]
  • Muszynski A [6]
  • Spellmon N [6]
  • Stephens Z [6]
  • Vlach J [6]

Author by ORCID

  • Zimmer J [12]
  • Gorniak I [12]
  • Gawda T [6]
  • Vlach J [6]
  • Spellmon N [6]
  • Kossiakoff AA [6]
  • Muszynski A [6]

Journal

  • NAT COMMUN [6]
  • NAT STRUCT MOL BIOL [6]

Software

  • CRYOSPARC [9]

Microscope

  • FEI TITAN KRIOS [12]

Electron Source

  • FIELD EMISSION GUN [12]

Film or detector model

  • GATAN K3 6K X 4K [12]

External links

  • PDB [12]
  • UniProt [12]
  • AlphaFold DB [9]
  • Gene Ontology [9]
  • InterPro [9]
  • PDBe-Kb [9]
  • Pfam [9]
  • ChEBI [8]
  • ChEMBL [8]
  • DrugBank [8]
  • EMPIAR [8]