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author:"Gomez-Llorente Y"

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Current Database

  • EMDB [30]

Current status

  • REL [30]

Sample type

  • Protein [30]
  • Complex [28]
  • Ligand [24]
  • DNA [6]
  • Sample [2]

Organism

  • Homo sapiens [21]
  • Synthetic construct [6]
  • Human immunodeficiency virus 1 [5]
  • Saccharomyces cerevisiae [2]
  • Saccharomyces cerevisiae [2]
  • Methanothermobacter thermautotrophicus [1]

EM Method

  • Single-particle [30]

Resolution

  • < 2Å [3]
  • ≥ 2Å and < 3Å [9]
  • ≥ 3Å and < 4Å [13]
  • ≥ 4Å and < 5Å [3]
  • ≥ 20Å and < 30Å [2]

Model molecular weight

  • 100-250 kDa [5]
  • 250-500 kDa [11]
  • 500-1000 kDa [12]

Release Date

  • 2026 [5]
  • 2025 [11]
  • 2023 [2]
  • 2021 [6]
  • 2020 [4]
  • 2013 [1]
  • 2006 [1]

Author by name

  • Gomez-llorente Y [30]
  • Malik R [16]
  • Ubarretxena-belandia I [16]
  • Azem A [13]
  • Hirsch JA [13]
  • Jebara F [13]
  • Patra M [13]
  • Berruezo AG [11]
  • Gil-carton D [11]
  • Lopez-alonso JP [11]
  • Shkolnisky Y [11]
  • Tascon I [11]
  • Vilchez-garcia J [11]
  • Strickland C [8]
  • Klein DJ [7]
  • Bailly MA [6]
  • Chakravarthy K [6]
  • Chen X [6]
  • Cipriano D [6]
  • Fayadat-dilman L [6]
  • Gathiaka S [6]
  • Greb H [6]
  • Hall B [6]
  • Handa M [6]
  • Hsieh M [6]
  • Juan V [6]
  • Kofman E [6]
  • Lin H [6]
  • Miller JR [6]
  • Nguyen N [6]
  • O Neil J [6]
  • Palte RL [6]
  • Scapin G [6]
  • Shaheen H [6]
  • Sterner E [6]
  • Sun A [6]
  • Taremi S [6]
  • Asante-appiah E [5]
  • Calero G [5]
  • Diamond TL [5]
  • Gabelli SB [5]
  • Hayes RP [5]
  • Hecksel CW [5]
  • Raheem I [5]
  • Tummala S [5]
  • Vergara S [5]
  • Walker SN [5]
  • Aggarwal AK [3]
  • Jain R [3]
  • Johnson RE [3]
  • Prakash L [3]
  • Prakash S [3]
  • Brooun A [2]
  • Chen Y [2]
  • Chen YT [2]
  • Chomsky-hecht O [2]
  • Ginnetti AT [2]
  • Hong MR [2]
  • Ishchenko A [2]
  • Kopylov M [2]
  • Kostas J [2]
  • Kraus RL [2]
  • Li Y [2]
  • Marino MJ [2]
  • Nisemblat S [2]
  • Parnas A [2]
  • Santarelli VP [2]
  • Soisson SM [2]
  • Stachel SJ [2]
  • Wang D [2]
  • Zhang XJ [2]
  • Carazo JM [1]
  • Chen XS [1]
  • Fletcher RJ [1]
  • Roy Choudhury J [1]
  • San Martin C [1]
  • Ubarrextena-belandia I [1]

Author by ORCID

  • Gomez-llorente Y [25]
  • Malik R [16]
  • Ubarretxena-belandia I [15]
  • Hirsch JA [13]
  • Azem A [13]
  • Berruezo AG [11]
  • Shkolnisky Y [11]
  • Vilchez-garcia J [11]
  • Lopez-alonso JP [11]
  • Tascon I [11]
  • Gil-carton D [11]
  • Palte RL [6]
  • Walker SN [5]
  • Klein DJ [5]
  • Raheem I [5]
  • Hecksel CW [5]
  • Gabelli SB [5]
  • Calero G [5]
  • Zhang XJ [2]
  • Stachel SJ [2]
  • Hong MR [2]
  • Kraus RL [2]
  • Soisson SM [2]
  • Ishchenko A [2]
  • Wang D [2]
  • Kopylov M [2]
  • Klein DJ [2]
  • Jain R [2]
  • Aggarwal AK [2]
  • Li Y [2]
  • Santarelli VP [2]
  • Marino MJ [2]
  • San Martin C [1]

Journal

  • BIORXIV [11]
  • COMMUN BIOL [6]
  • ACS INFECT DIS. [5]
  • NAT COMMUN [2]
  • NAT STRUCT MOL BIOL [2]
  • PNAS [2]
  • CELL REP [1]
  • J BIOL CHEM [1]

Software

  • CRYOSPARC [16]
  • RELION [5]
  • AMIRA [1]
  • CTFFIND [1]
  • SPIDER, XMIPP [1]
  • XMIPP, EMAN2, SPIDER [1]

Microscope

  • FEI TITAN KRIOS [18]
  • TFS KRIOS [10]
  • JEOL 1200EXII [1]
  • JEOL 2100F [1]

Electron Source

  • FIELD EMISSION GUN [29]
  • TUNGSTEN HAIRPIN [1]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [13]
  • GATAN K3 BIOQUANTUM 6K X 4K [10]
  • FEI FALCON IV 4K X 4K [5]
  • GENERIC TVIPS [1]
  • KODAK SO-163 FILM [1]

External links

  • AlphaFold DB [29]
  • PDBe-Kb [29]
  • UniProt [29]
  • PDB [28]
  • Pfam [28]
  • ChEBI [24]
  • Gene Ontology [24]
  • InterPro [24]
  • DrugBank [23]
  • ChEMBL [19]
  • Complex Portal [13]
Sort by: Download
Showing 1 - 10 of 30. Page 1 of 3
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Preview 10 entries View All Download file
EMD-77368
Download Map
3D View
HIV-1 reverse transcriptase in complex with DNAddG Aptamer and unincorporated ISL-triphosphate
CryoEM
Release date: Sept. 2, 2026
Resolution: 1.85 Å
EM Method: Single-particle
Fitted PDBs: 36bt
Q-score: 0.675
Similar entry percentile: 54%

Hecksel CW, Walker SN, Raheem I, Asante-Appiah E, Calero G, Diamond TL, Gabelli SB, Gomez-Llorente Y, Hayes RP, Tummala S, Vergara S, Klein DJ

Acs Infect Dis. (2026) 12 pp. 3179-3190 [ Pubmed: 42725963 DOI: doi:10.1021/acsinfecdis.6c00431 ]

EMD-77389
Download Map
3D View
HIV-1 reverse transcriptase in complex with DNA Aptamer and Incorporated dATP
CryoEM
Release date: Sept. 2, 2026
Resolution: 1.9 Å
EM Method: Single-particle
Fitted PDBs: 36cp
Q-score: 0.635
Similar entry percentile: 40%

Hecksel CW, Walker SN, Raheem I, Asante-Appiah E, Calero G, Diamond TL, Gabelli SB, Gomez-Llorente Y, Hayes RP, Tummala S, Vergara S, Klein DJ

Acs Infect Dis. (2026) 12 pp. 3179-3190 [ Pubmed: 42725963 DOI: doi:10.1021/acsinfecdis.6c00431 ]

EMD-77393
Download Map
3D View
HIV-1 reverse transcriptase F227C in complex with DNAddG Aptamer and unincorporated ISL-triphosphate
CryoEM
Release date: Sept. 2, 2026
Resolution: 1.9 Å
EM Method: Single-particle
Fitted PDBs: 36cw
Q-score: 0.644
Similar entry percentile: 45%

Hecksel CW, Walker SN, Raheem I, Asante-Appiah E, Calero G, Diamond TL, Gabelli SB, Gomez-Llorente Y, Hayes RP, Tummala S, Vergara S, Klein DJ

Acs Infect Dis. (2026) 12 pp. 3179-3190 [ Pubmed: 42725963 DOI: doi:10.1021/acsinfecdis.6c00431 ]

EMD-77401
Download Map
3D View
HIV-1 reverse transcriptase F227C in complex with DNA Aptamer and Incorporated dATP
CryoEM
Release date: Sept. 2, 2026
Resolution: 2.1 Å
EM Method: Single-particle
Fitted PDBs: 36dk
Q-score: 0.657
Similar entry percentile: 72%

Hecksel CW, Walker SN, Raheem I, Asante-Appiah E, Calero G, Diamond TL, Gabelli SB, Gomez-Llorente Y, Hayes RP, Tummala S, Vergara S, Klein DJ

Acs Infect Dis. (2026) 12 pp. 3179-3190 [ Pubmed: 42725963 DOI: doi:10.1021/acsinfecdis.6c00431 ]

EMD-77403
Download Map
3D View
HIV-1 reverse transcriptase F227C in complex with DNAddG Aptamer
CryoEM
Release date: Sept. 2, 2026
Resolution: 2.2 Å
EM Method: Single-particle
Fitted PDBs: 36dn
Q-score: 0.602
Similar entry percentile: 54%

Hecksel CW, Walker SN, Raheem I, Asante-Appiah E, Calero G, Diamond TL, Gabelli SB, Gomez-Llorente Y, Hayes RP, Tummala S, Vergara S, Klein DJ

Acs Infect Dis. (2026) 12 pp. 3179-3190 [ Pubmed: 42725963 DOI: doi:10.1021/acsinfecdis.6c00431 ]

EMD-51890
Download Map
3D View
ATP-bound human mitochondrial Hsp60-Hsp10 football complex C1
CryoEM
Release date: Nov. 5, 2025
Resolution: 2.98 Å
EM Method: Single-particle
Fitted PDBs: 9h5s
Q-score: 0.517
Similar entry percentile: 60%

Tascon I, Lopez-Alonso JP, Shkolnisky Y, Gil-Carton D, Vilchez-Garcia J, Berruezo AG, Gomez-Llorente Y, Malik R, Jebara F, Patra M, Hirsch JA, Azem A, Ubarretxena-Belandia I

bioRxiv (2025) [ DOI: doi:10.1101/2025.10.04.680452 Pubmed: 41256524 ]

EMD-51891
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3D View
ATP-bound human mitochondrial Hsp60-Hsp10 half football complex C1
CryoEM
Release date: Nov. 5, 2025
Resolution: 3.44 Å
EM Method: Single-particle
Fitted PDBs: 9h5t
Q-score: 0.473
Similar entry percentile: 64%

Tascon I, Lopez-Alonso JP, Shkolnisky Y, Gil-Carton D, Vilchez-Garcia J, Berruezo AG, Gomez-Llorente Y, Malik R, Jebara F, Patra M, Hirsch JA, Azem A, Ubarretxena-Belandia I

bioRxiv (2025) [ DOI: doi:10.1101/2025.10.04.680452 Pubmed: 41256524 ]

EMD-51892
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3D View
ATP-bound human mitochondrial Hsp60 double-ring complex C1
CryoEM
Release date: Nov. 5, 2025
Resolution: 3.14 Å
EM Method: Single-particle
Fitted PDBs: 9h5u
Q-score: 0.463
Similar entry percentile: 43%

Tascon I, Lopez-Alonso JP, Shkolnisky Y, Gil-Carton D, Vilchez-Garcia J, Berruezo AG, Gomez-Llorente Y, Malik R, Jebara F, Patra M, Hirsch JA, Azem A, Ubarretxena-Belandia I

bioRxiv (2025) [ DOI: doi:10.1101/2025.10.04.680452 Pubmed: 41256524 ]

EMD-51893
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3D View
Apo human mitochondrial Hsp60 C1
CryoEM
Release date: Nov. 5, 2025
Resolution: 3.96 Å
EM Method: Single-particle
Fitted PDBs: 9h5v
Q-score: 0.302
Similar entry percentile: 22%

Tascon I, Lopez-Alonso JP, Shkolnisky Y, Gil-Carton D, Vilchez-Garcia J, Berruezo AG, Gomez-Llorente Y, Malik R, Jebara F, Patra M, Hirsch JA, Azem A, Ubarretxena-Belandia I

bioRxiv (2025) [ DOI: doi:10.1101/2025.10.04.680452 Pubmed: 41256524 ]

EMD-19930
Download Map
3D View
ATP-bound human mitochondrial Hsp60-Hsp10 football complex
CryoEM
Release date: April 9, 2025
Resolution: 2.58 Å
EM Method: Single-particle
Fitted PDBs: 9es0
Q-score: 0.615
Similar entry percentile: 85%

Tascon I, Lopez-Alonso JP, Shkolnisky Y, Gil-Carton D, Vilchez-Garcia J, Berruezo AG, Gomez-Llorente Y, Malik R, Jebara F, Patra M, Hirsch JA, Azem A, Ubarretxena-Belandia I

bioRxiv (2025) [ DOI: doi:10.1101/2025.10.04.680452 Pubmed: 41256524 ]

Sort by: Download
Showing 1 - 10 of 30. Page 1 of 3
Display:
Statistics
×

Download


Preview 10 entries View All Download file

Filter By

Current Database

  • EMDB [30]

Current status

  • REL [30]

Sample type

  • Protein [30]
  • Complex [28]
  • Ligand [24]
  • DNA [6]
  • Sample [2]

Organism

  • Homo sapiens [21]
  • Synthetic construct [6]
  • Human immunodeficiency virus 1 [5]
  • Saccharomyces cerevisiae [2]
  • Saccharomyces cerevisiae [2]
  • Methanothermobacter thermautotrophicus [1]

EM Method

  • Single-particle [30]

Resolution

  • < 2Å [3]
  • ≥ 2Å and < 3Å [9]
  • ≥ 3Å and < 4Å [13]
  • ≥ 4Å and < 5Å [3]
  • ≥ 20Å and < 30Å [2]

Model molecular weight

  • 100-250 kDa [5]
  • 250-500 kDa [11]
  • 500-1000 kDa [12]

Release Date

  • 2026 [5]
  • 2025 [11]
  • 2023 [2]
  • 2021 [6]
  • 2020 [4]
  • 2013 [1]
  • 2006 [1]

Author by name

  • Gomez-llorente Y [30]
  • Malik R [16]
  • Ubarretxena-belandia I [16]
  • Azem A [13]
  • Hirsch JA [13]
  • Jebara F [13]
  • Patra M [13]
  • Berruezo AG [11]
  • Gil-carton D [11]
  • Lopez-alonso JP [11]
  • Shkolnisky Y [11]
  • Tascon I [11]
  • Vilchez-garcia J [11]
  • Strickland C [8]
  • Klein DJ [7]
  • Bailly MA [6]
  • Chakravarthy K [6]
  • Chen X [6]
  • Cipriano D [6]
  • Fayadat-dilman L [6]
  • Gathiaka S [6]
  • Greb H [6]
  • Hall B [6]
  • Handa M [6]
  • Hsieh M [6]
  • Juan V [6]
  • Kofman E [6]
  • Lin H [6]
  • Miller JR [6]
  • Nguyen N [6]
  • O Neil J [6]
  • Palte RL [6]
  • Scapin G [6]
  • Shaheen H [6]
  • Sterner E [6]
  • Sun A [6]
  • Taremi S [6]
  • Asante-appiah E [5]
  • Calero G [5]
  • Diamond TL [5]
  • Gabelli SB [5]
  • Hayes RP [5]
  • Hecksel CW [5]
  • Raheem I [5]
  • Tummala S [5]
  • Vergara S [5]
  • Walker SN [5]
  • Aggarwal AK [3]
  • Jain R [3]
  • Johnson RE [3]
  • Prakash L [3]
  • Prakash S [3]
  • Brooun A [2]
  • Chen Y [2]
  • Chen YT [2]
  • Chomsky-hecht O [2]
  • Ginnetti AT [2]
  • Hong MR [2]
  • Ishchenko A [2]
  • Kopylov M [2]
  • Kostas J [2]
  • Kraus RL [2]
  • Li Y [2]
  • Marino MJ [2]
  • Nisemblat S [2]
  • Parnas A [2]
  • Santarelli VP [2]
  • Soisson SM [2]
  • Stachel SJ [2]
  • Wang D [2]
  • Zhang XJ [2]
  • Carazo JM [1]
  • Chen XS [1]
  • Fletcher RJ [1]
  • Roy Choudhury J [1]
  • San Martin C [1]
  • Ubarrextena-belandia I [1]

Author by ORCID

  • Gomez-llorente Y [25]
  • Malik R [16]
  • Ubarretxena-belandia I [15]
  • Hirsch JA [13]
  • Azem A [13]
  • Berruezo AG [11]
  • Shkolnisky Y [11]
  • Vilchez-garcia J [11]
  • Lopez-alonso JP [11]
  • Tascon I [11]
  • Gil-carton D [11]
  • Palte RL [6]
  • Walker SN [5]
  • Klein DJ [5]
  • Raheem I [5]
  • Hecksel CW [5]
  • Gabelli SB [5]
  • Calero G [5]
  • Zhang XJ [2]
  • Stachel SJ [2]
  • Hong MR [2]
  • Kraus RL [2]
  • Soisson SM [2]
  • Ishchenko A [2]
  • Wang D [2]
  • Kopylov M [2]
  • Klein DJ [2]
  • Jain R [2]
  • Aggarwal AK [2]
  • Li Y [2]
  • Santarelli VP [2]
  • Marino MJ [2]
  • San Martin C [1]

Journal

  • BIORXIV [11]
  • COMMUN BIOL [6]
  • ACS INFECT DIS. [5]
  • NAT COMMUN [2]
  • NAT STRUCT MOL BIOL [2]
  • PNAS [2]
  • CELL REP [1]
  • J BIOL CHEM [1]

Software

  • CRYOSPARC [16]
  • RELION [5]
  • AMIRA [1]
  • CTFFIND [1]
  • SPIDER, XMIPP [1]
  • XMIPP, EMAN2, SPIDER [1]

Microscope

  • FEI TITAN KRIOS [18]
  • TFS KRIOS [10]
  • JEOL 1200EXII [1]
  • JEOL 2100F [1]

Electron Source

  • FIELD EMISSION GUN [29]
  • TUNGSTEN HAIRPIN [1]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [13]
  • GATAN K3 BIOQUANTUM 6K X 4K [10]
  • FEI FALCON IV 4K X 4K [5]
  • GENERIC TVIPS [1]
  • KODAK SO-163 FILM [1]

External links

  • AlphaFold DB [29]
  • PDBe-Kb [29]
  • UniProt [29]
  • PDB [28]
  • Pfam [28]
  • ChEBI [24]
  • Gene Ontology [24]
  • InterPro [24]
  • DrugBank [23]
  • ChEMBL [19]
  • Complex Portal [13]