Edit your search query here and hit Return to execute it:
author:"Dyba MA"

Filter By

Current Database

  • EMDB [14]

Current status

  • REL [14]

Sample type

  • Complex [14]
  • Ligand [14]
  • RNA [14]

Organism

  • Geobacillus stearothermophilus [14]

EM Method

  • Single-particle [14]

Resolution

  • ≥ 2Å and < 3Å [6]
  • ≥ 3Å and < 4Å [8]

Model molecular weight

  • 100-250 kDa [14]

Release Date

  • 2026 [14]

Author by name

  • Bhoge BA [14]
  • Chen SY [14]
  • Degenhardt MFS [14]
  • Dyba MA [14]
  • Lee Y-T [14]
  • Lee YT [14]
  • Skeparnias I [14]
  • Stagno JR [14]
  • Tarasov SG [14]
  • Wang Y-X [14]
  • Wang YX [14]
  • Zhang J [14]

Author by ORCID

  • Lee YT [14]
  • Zhang J [14]
  • Wang YX [14]
  • Stagno JR [14]
  • Degenhardt MFS [14]

Journal

  • NAT COMMUN [14]

Software

  • CRYOSPARC [14]

Microscope

  • FEI TALOS ARCTICA [13]
  • TFS KRIOS [1]

Electron Source

  • FIELD EMISSION GUN [14]

Film or detector model

  • GATAN K3 BIOQUANTUM 6K X 4K [13]
  • FEI FALCON III 4K X 4K [1]

External links

  • ChEBI [14]
  • DrugBank [14]
  • PDB [14]
Sort by: Download
Showing 1 - 10 of 14. Page 1 of 2
Display:
Statistics
×

Download











































Preview first 10
Download
EMD-70888
Download Map
3D View
Structure of Geobacillus stearothermophilus RNase P ribozyme
CryoEM
Release date: May 20, 2026
Resolution: 3.19 Å
EM Method: Single-particle
Fitted PDBs: 9ov3
Q-score: 0.352

Lee YT, Degenhardt MFS, Skeparnias I, Chen SY, Bhoge BA, Tarasov SG, Dyba MA, Zhang J, Stagno JR, Wang YX

Nat Commun (2026) [ DOI: doi:10.1038/s41467-026-71597-4 Pubmed: 41986363 ]

EMD-70891
Download Map
3D View
Structure of Geobacillus stearothermophilus RNase P ribozyme sub-conformation 1
CryoEM
Release date: May 20, 2026
Resolution: 3.46 Å
EM Method: Single-particle
Fitted PDBs: 9ov6
Q-score: 0.33

Lee YT, Degenhardt MFS, Skeparnias I, Chen SY, Bhoge BA, Tarasov SG, Dyba MA, Zhang J, Stagno JR, Wang YX

Nat Commun (2026) [ DOI: doi:10.1038/s41467-026-71597-4 Pubmed: 41986363 ]

EMD-70892
Download Map
3D View
Structure of Geobacillus stearothermophilus RNase P ribozyme sub-conformation 2
CryoEM
Release date: May 20, 2026
Resolution: 3.27 Å
EM Method: Single-particle
Fitted PDBs: 9ov7
Q-score: 0.332

Lee YT, Degenhardt MFS, Skeparnias I, Chen SY, Bhoge BA, Tarasov SG, Dyba MA, Zhang J, Stagno JR, Wang YX

Nat Commun (2026) [ DOI: doi:10.1038/s41467-026-71597-4 Pubmed: 41986363 ]

EMD-70893
Download Map
3D View
Structure of Geobacillus stearothermophilus RNase P ribozyme sub-conformation 3
CryoEM
Release date: May 20, 2026
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 9ov8
Q-score: 0.324

Lee YT, Degenhardt MFS, Skeparnias I, Chen SY, Bhoge BA, Tarasov SG, Dyba MA, Zhang J, Stagno JR, Wang YX

Nat Commun (2026) [ DOI: doi:10.1038/s41467-026-71597-4 Pubmed: 41986363 ]

EMD-70896
Download Map
3D View
Structure of Geobacillus stearothermophilus RNase P ribozyme in 5 mM Mg2
CryoEM
Release date: May 20, 2026
Resolution: 3.21 Å
EM Method: Single-particle
Fitted PDBs: 9ovb
Q-score: 0.365

Lee YT, Degenhardt MFS, Skeparnias I, Chen SY, Bhoge BA, Tarasov SG, Dyba MA, Zhang J, Stagno JR, Wang YX

Nat Commun (2026) [ DOI: doi:10.1038/s41467-026-71597-4 Pubmed: 41986363 ]

EMD-70897
Download Map
3D View
Structure of Geobacillus stearothermophilus RNase P ribozyme in 10 mM Mg2
CryoEM
Release date: May 20, 2026
Resolution: 2.97 Å
EM Method: Single-particle
Fitted PDBs: 9ovc
Q-score: 0.403

Lee YT, Degenhardt MFS, Skeparnias I, Chen SY, Bhoge BA, Tarasov SG, Dyba MA, Zhang J, Stagno JR, Wang YX

Nat Commun (2026) [ DOI: doi:10.1038/s41467-026-71597-4 Pubmed: 41986363 ]

EMD-70933
Download Map
3D View
Structure of Geobacillus stearothermophilus RNase P ribozyme in complex with precursor tRNA in 5 mM Ca2
CryoEM
Release date: May 20, 2026
Resolution: 2.94 Å
EM Method: Single-particle
Fitted PDBs: 9owj
Q-score: 0.417

Lee YT, Degenhardt MFS, Skeparnias I, Chen SY, Bhoge BA, Tarasov SG, Dyba MA, Zhang J, Stagno JR, Wang YX

Nat Commun (2026) [ DOI: doi:10.1038/s41467-026-71597-4 Pubmed: 41986363 ]

EMD-70935
Download Map
3D View
Structure of Geobacillus stearothermophilus RNase P ribozyme in complex with mature tRNA in 5 mM Ca2
CryoEM
Release date: May 20, 2026
Resolution: 2.99 Å
EM Method: Single-particle
Fitted PDBs: 9owl
Q-score: 0.414

Lee YT, Degenhardt MFS, Skeparnias I, Chen SY, Bhoge BA, Tarasov SG, Dyba MA, Zhang J, Stagno JR, Wang YX

Nat Commun (2026) [ DOI: doi:10.1038/s41467-026-71597-4 Pubmed: 41986363 ]

EMD-70936
Download Map
3D View
Structure of Geobacillus stearothermophilus RNase P ribozyme in complex with mature tRNA in 10 mM Ca2
CryoEM
Release date: May 20, 2026
Resolution: 2.95 Å
EM Method: Single-particle
Fitted PDBs: 9owm
Q-score: 0.427

Lee YT, Degenhardt MFS, Skeparnias I, Chen SY, Bhoge BA, Tarasov SG, Dyba MA, Zhang J, Stagno JR, Wang YX

Nat Commun (2026) [ DOI: doi:10.1038/s41467-026-71597-4 Pubmed: 41986363 ]

EMD-70994
Download Map
3D View
Structure of Geobacillus stearothermophilus RNase P ribozyme tetraloop mutant sub-conformation 1
CryoEM
Release date: May 20, 2026
Resolution: 3.14 Å
EM Method: Single-particle
Fitted PDBs: 9oy2
Q-score: 0.361

Lee YT, Degenhardt MFS, Skeparnias I, Chen SY, Bhoge BA, Tarasov SG, Dyba MA, Zhang J, Stagno JR, Wang YX

Nat Commun (2026) [ DOI: doi:10.1038/s41467-026-71597-4 Pubmed: 41986363 ]

Sort by: Download
Showing 1 - 10 of 14. Page 1 of 2
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [14]

Current status

  • REL [14]

Sample type

  • Complex [14]
  • Ligand [14]
  • RNA [14]

Organism

  • Geobacillus stearothermophilus [14]

EM Method

  • Single-particle [14]

Resolution

  • ≥ 2Å and < 3Å [6]
  • ≥ 3Å and < 4Å [8]

Model molecular weight

  • 100-250 kDa [14]

Release Date

  • 2026 [14]

Author by name

  • Bhoge BA [14]
  • Chen SY [14]
  • Degenhardt MFS [14]
  • Dyba MA [14]
  • Lee Y-T [14]
  • Lee YT [14]
  • Skeparnias I [14]
  • Stagno JR [14]
  • Tarasov SG [14]
  • Wang Y-X [14]
  • Wang YX [14]
  • Zhang J [14]

Author by ORCID

  • Lee YT [14]
  • Zhang J [14]
  • Wang YX [14]
  • Stagno JR [14]
  • Degenhardt MFS [14]

Journal

  • NAT COMMUN [14]

Software

  • CRYOSPARC [14]

Microscope

  • FEI TALOS ARCTICA [13]
  • TFS KRIOS [1]

Electron Source

  • FIELD EMISSION GUN [14]

Film or detector model

  • GATAN K3 BIOQUANTUM 6K X 4K [13]
  • FEI FALCON III 4K X 4K [1]

External links

  • ChEBI [14]
  • DrugBank [14]
  • PDB [14]