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author:"Dou Y"

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Current Database

  • EMDB [37]

Current status

  • REL [37]

Sample type

  • Complex [37]
  • Protein [30]
  • Ligand [15]
  • DNA [8]
  • RNA [2]

Organism

  • Homo sapiens [36]
  • Xenopus laevis [14]
  • Synthetic construct [8]
  • Severe acute respiratory syndrome coronavirus [3]
  • Dabie bandavirus [1]
  • Severe acute respiratory syndrome coronavirus [1]
  • Vicugna pacos [1]

EM Method

  • Single-particle [37]

Resolution

  • ≥ 2Å and < 3Å [7]
  • ≥ 3Å and < 4Å [15]
  • ≥ 4Å and < 5Å [8]
  • ≥ 5Å and < 6Å [2]
  • ≥ 6Å and < 8Å [5]

Model molecular weight

  • 50-100 kDa [1]
  • 100-250 kDa [14]
  • 250-500 kDa [14]
  • 500-1000 kDa [1]

Release Date

  • 2026 [9]
  • 2025 [10]
  • 2022 [8]
  • 2021 [7]
  • 2019 [3]

Author by name

  • Dou Y [37]
  • Ayoub A [8]
  • Cho US [8]
  • Lee YT [8]
  • Li Y [8]
  • Lu B [8]
  • Park SH [8]
  • Xu X [8]
  • Zhang Y [8]
  • Abe K [7]
  • Andersen JS [7]
  • Brennecke J [7]
  • Bugai A [7]
  • Fin L [7]
  • Graf M [7]
  • Hohmann U [7]
  • Jakobsen L [7]
  • Jensen TH [7]
  • Johnsen D [7]
  • Le Rest M [7]
  • Lorenzo A [7]
  • Plaschka C [7]
  • Polak P [7]
  • Rouviere JO [7]
  • Suzuki J [7]
  • Tirian L [7]
  • Cao T [6]
  • Deng YQ [6]
  • Du P [6]
  • Eldstrom J [6]
  • Fedida D [6]
  • Jia Z [6]
  • Kyriakis E [6]
  • Lan J [6]
  • Liu H [6]
  • Liu P [6]
  • Qin CF [6]
  • Sha L [6]
  • Van Petegem F [6]
  • Wang K [6]
  • Wang X [6]
  • Wu G [6]
  • Xu J [6]
  • Xu K [6]
  • Xu L [6]
  • Zhang G [6]
  • Zheng W [6]
  • Ataei F [4]
  • Maragliano L [4]
  • Molinarolo S [4]
  • Roscioni A [4]
  • Russo S [4]
  • Sastre D [4]
  • An S [3]
  • Cianfrocco MA [3]
  • Kim H [3]
  • Mao F [3]
  • Su M [3]
  • Wang Y [3]
  • Zhang B [3]
  • An R [2]
  • Bai Y [2]
  • Cao Y [2]
  • Chan M [2]
  • Du S [2]
  • Feng Y [2]
  • Gao C [2]
  • Guo X [2]
  • Huang W [2]
  • Jin R [2]
  • Li X [2]
  • Liu S [2]
  • Ma W [2]
  • Ma Y [2]
  • Matsui R [2]
  • Qin C [2]
  • Sahakyan H [2]
  • Shi R [2]
  • Song L [2]
  • Song W [2]
  • Su B [2]
  • Taddei A [2]
  • Tian M [2]
  • Wang J [2]
  • Wei Y [2]
  • Willegems K [2]
  • Wu J [2]
  • Xiao J [2]
  • Xiao T [2]
  • Xie XS [2]
  • Yisimayi A [2]
  • Yuan T [2]
  • Zhang N [2]
  • Zhang Z [2]
  • Cai J [1]
  • Cai R [1]
  • Cao K [1]
  • Chang Z [1]
  • Chen M [1]
  • Geng S [1]

Author by ORCID

  • Zheng W [6]
  • Dou Y [6]
  • Dou Y [6]
  • Fedida D [4]
  • Eldstrom J [4]
  • Van Petegem F [4]
  • Kim H [3]
  • Lee YT [3]
  • Cho US [3]
  • Park SH [3]
  • Jensen TH [2]
  • Feng Y [2]
  • Cao Y [2]
  • Xie XS [2]
  • Sastre D [2]
  • Wang Y [2]
  • Lorenzo A [2]
  • Rouviere JO [2]
  • Wei Y [2]
  • Huang W [2]
  • Brennecke J [2]
  • Maragliano L [2]
  • Plaschka C [2]
  • Molinarolo S [2]
  • Andersen JS [2]
  • Gao C [2]
  • Kyriakis E [2]
  • Xiao J [2]
  • Hohmann U [2]
  • Sahakyan H [2]
  • Dou Y [2]
  • Graf M [2]
  • Roscioni A [2]
  • Le Rest M [2]
  • Hu Z [1]
  • Xu B [1]
  • Wu Z [1]
  • Chen M [1]
  • Li M [1]
  • Wu X [1]
  • Wang Y [1]
  • Lou Z [1]
  • Wu Y [1]
  • Yang Q [1]
  • Hu J [1]
  • Long J [1]
  • Dou Y [1]
  • Liang S [1]
  • Zou Q [1]
  • Zhu L [1]
  • Yang X [1]
  • Meng S [1]
  • Zhu K [1]
  • Geng S [1]

Journal

  • NAT COMMUN [10]
  • NATURE [7]
  • TO BE PUBLISHED [7]
  • ANTIB THER [6]
  • BIOCHEMISTRY [2]
  • CELL RES [2]
  • SCI ADV [2]
  • SCI TRANSL MED [1]

Software

  • CRYOSPARC [13]
  • CTFFIND [2]

Microscope

  • TFS KRIOS [19]
  • FEI TITAN KRIOS [18]

Electron Source

  • FIELD EMISSION GUN [37]

Film or detector model

  • FEI FALCON IV 4K X 4K [12]
  • GATAN K3 6K X 4K [9]
  • GATAN K2 SUMMIT 4K X 4K [8]
  • GATAN K2 QUANTUM 4K X 4K [7]
  • FEI FALCON III 4K X 4K [1]

External links

  • PDB [30]
  • PDBe-Kb [30]
  • UniProt [30]
  • AlphaFold DB [29]
  • Pfam [29]
  • Gene Ontology [27]
  • InterPro [23]
  • Complex Portal [15]
  • ChEBI [13]
  • DrugBank [13]
  • ChEMBL [11]
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Showing 1 - 10 of 37. Page 1 of 4
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EMD-75305
Download Map
3D View
Xenopus KCNQ1 Intermediate State E1R/R2E in complex with UCL2077
CryoEM
Release date: Sept. 2, 2026
Resolution: 3.95 Å
EM Method: Single-particle
Fitted PDBs: 10nk
Q-score: 0.299
Similar entry percentile: 21%

Kyriakis E, Roscioni A, Eldstrom J, Sastre D, Dou Y, Taddei A, Molinarolo S, Tian M, Maragliano L, Van Petegem F, Fedida D

Sci Adv (2026) [ ]

EMD-75306
Download Map
3D View
Xenopus KCNQ1 in complex with UCL2077
CryoEM
Release date: Sept. 2, 2026
Resolution: 3.81 Å
EM Method: Single-particle
Fitted PDBs: 10nl
Q-score: 0.3
Similar entry percentile: 17%

Kyriakis E, Roscioni A, Eldstrom J, Sastre D, Dou Y, Taddei A, Molinarolo S, Tian M, Maragliano L, Van Petegem F, Fedida D

Sci Adv (2026) [ ]

EMD-54283
Download Map
3D View
Human UAP56-RNA - SAC3D1-PCID2-SEM1 complex, Map A
CryoEM
Consensus map
Release date: July 1, 2026
Resolution: 2.88 Å
EM Method: Single-particle

Bugai A, Hohmann U, Lorenzo A, Graf M, Fin L, Rouviere JO, Tirian L, Dou Y, Le Rest M, Polak P, Johnsen D, Jakobsen L, Andersen JS, Brennecke J, Plaschka C, Jensen TH

Nature (2026) 655 pp. 1070-1078 [ DOI: doi:10.1038/s41586-026-10650-0 Pubmed: 42310446 ]

EMD-54284
Download Map
3D View
Map B of the human UAP56-RNA - SAC3D1-PCID2-SEM1 complex
CryoEM
Focused map
Release date: July 1, 2026
Resolution: 2.62 Å
EM Method: Single-particle

Bugai A, Hohmann U, Lorenzo A, Graf M, Fin L, Rouviere JO, Tirian L, Dou Y, Le Rest M, Polak P, Johnsen D, Jakobsen L, Andersen JS, Brennecke J, Plaschka C, Jensen TH

Nature (2026) 655 pp. 1070-1078 [ DOI: doi:10.1038/s41586-026-10650-0 Pubmed: 42310446 ]

EMD-54282
Download Map
3D View
Cryo-EM structure of the human UAP56-RNA - SAC3D1-PCID2-SEM1 complex
Composite map
CryoEM
Release date: June 24, 2026
Resolution: 2.62 Å
EM Method: Single-particle
Fitted PDBs: 9rv1
Q-score: 0.507
Similar entry percentile: 35%

Bugai A, Hohmann U, Lorenzo A, Graf M, Fin L, Rouviere JO, Tirian L, Dou Y, Le Rest M, Polak P, Johnsen D, Jakobsen L, Andersen JS, Brennecke J, Plaschka C, Jensen TH

Nature (2026) 655 pp. 1070-1078 [ DOI: doi:10.1038/s41586-026-10650-0 Pubmed: 42310446 ]

EMD-56930
Download Map
3D View
Cryo-EM structure of the human SAC3D1-PCID2-SEM1 complex
CryoEM
Release date: June 24, 2026
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 28wy
Q-score: 0.354
Similar entry percentile: 22%

Bugai A, Hohmann U, Lorenzo A, Graf M, Fin L, Rouviere JO, Tirian L, Dou Y, Le Rest M, Polak P, Johnsen D, Jakobsen L, Andersen JS, Brennecke J, Plaschka C, Jensen TH

Nature (2026) 655 pp. 1070-1078 [ DOI: doi:10.1038/s41586-026-10650-0 Pubmed: 42310446 ]

EMD-56931
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3D View
Cryo-EM structure of the human LENG8-PCID2-SEM1 complex
CryoEM
Release date: June 24, 2026
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 28wz
Q-score: 0.371
Similar entry percentile: 23%

Bugai A, Hohmann U, Lorenzo A, Graf M, Fin L, Rouviere JO, Tirian L, Dou Y, Le Rest M, Polak P, Johnsen D, Jakobsen L, Andersen JS, Brennecke J, Plaschka C, Jensen TH

Nature (2026) 655 pp. 1070-1078 [ DOI: doi:10.1038/s41586-026-10650-0 Pubmed: 42310446 ]

EMD-56932
Download Map
3D View
Cryo-EM structure of the human UAP56 NTD - LENG8-PCID2-SEM1 complex
CryoEM
Release date: June 24, 2026
Resolution: 4.86 Å
EM Method: Single-particle
Fitted PDBs: 28xa
Q-score: 0.274
Similar entry percentile: 67%

Bugai A, Hohmann U, Lorenzo A, Graf M, Fin L, Rouviere JO, Tirian L, Dou Y, Le Rest M, Polak P, Johnsen D, Jakobsen L, Andersen JS, Brennecke J, Plaschka C, Jensen TH

Nature (2026) 655 pp. 1070-1078 [ DOI: doi:10.1038/s41586-026-10650-0 Pubmed: 42310446 ]

EMD-56933
Download Map
3D View
Cryo-EM structure of the human UAP56-RNA - LENG8-PCID2-SEM1 complex
CryoEM
Release date: June 24, 2026
Resolution: 6.2 Å
EM Method: Single-particle
Fitted PDBs: 28xb
Q-score: 0.173
Similar entry percentile: 52%

Bugai A, Hohmann U, Lorenzo A, Graf M, Fin L, Rouviere JO, Tirian L, Dou Y, Le Rest M, Polak P, Johnsen D, Jakobsen L, Andersen JS, Brennecke J, Plaschka C, Jensen TH

Nature (2026) 655 pp. 1070-1078 [ DOI: doi:10.1038/s41586-026-10650-0 Pubmed: 42310446 ]

EMD-62250
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3D View
Cryo-EM structure of human sodium pump WT in 3Na E1-AMPPCP state
CryoEM
Release date: Nov. 12, 2025
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 9kcg
Q-score: 0.505
Similar entry percentile: 61%

Dou Y, Abe K, Suzuki J

To Be Published

Sort by: Download
Showing 1 - 10 of 37. Page 1 of 4
Display:
Statistics
×

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Preview 10 entries View All Download file

Filter By

Current Database

  • EMDB [37]

Current status

  • REL [37]

Sample type

  • Complex [37]
  • Protein [30]
  • Ligand [15]
  • DNA [8]
  • RNA [2]

Organism

  • Homo sapiens [36]
  • Xenopus laevis [14]
  • Synthetic construct [8]
  • Severe acute respiratory syndrome coronavirus [3]
  • Dabie bandavirus [1]
  • Severe acute respiratory syndrome coronavirus [1]
  • Vicugna pacos [1]

EM Method

  • Single-particle [37]

Resolution

  • ≥ 2Å and < 3Å [7]
  • ≥ 3Å and < 4Å [15]
  • ≥ 4Å and < 5Å [8]
  • ≥ 5Å and < 6Å [2]
  • ≥ 6Å and < 8Å [5]

Model molecular weight

  • 50-100 kDa [1]
  • 100-250 kDa [14]
  • 250-500 kDa [14]
  • 500-1000 kDa [1]

Release Date

  • 2026 [9]
  • 2025 [10]
  • 2022 [8]
  • 2021 [7]
  • 2019 [3]

Author by name

  • Dou Y [37]
  • Ayoub A [8]
  • Cho US [8]
  • Lee YT [8]
  • Li Y [8]
  • Lu B [8]
  • Park SH [8]
  • Xu X [8]
  • Zhang Y [8]
  • Abe K [7]
  • Andersen JS [7]
  • Brennecke J [7]
  • Bugai A [7]
  • Fin L [7]
  • Graf M [7]
  • Hohmann U [7]
  • Jakobsen L [7]
  • Jensen TH [7]
  • Johnsen D [7]
  • Le Rest M [7]
  • Lorenzo A [7]
  • Plaschka C [7]
  • Polak P [7]
  • Rouviere JO [7]
  • Suzuki J [7]
  • Tirian L [7]
  • Cao T [6]
  • Deng YQ [6]
  • Du P [6]
  • Eldstrom J [6]
  • Fedida D [6]
  • Jia Z [6]
  • Kyriakis E [6]
  • Lan J [6]
  • Liu H [6]
  • Liu P [6]
  • Qin CF [6]
  • Sha L [6]
  • Van Petegem F [6]
  • Wang K [6]
  • Wang X [6]
  • Wu G [6]
  • Xu J [6]
  • Xu K [6]
  • Xu L [6]
  • Zhang G [6]
  • Zheng W [6]
  • Ataei F [4]
  • Maragliano L [4]
  • Molinarolo S [4]
  • Roscioni A [4]
  • Russo S [4]
  • Sastre D [4]
  • An S [3]
  • Cianfrocco MA [3]
  • Kim H [3]
  • Mao F [3]
  • Su M [3]
  • Wang Y [3]
  • Zhang B [3]
  • An R [2]
  • Bai Y [2]
  • Cao Y [2]
  • Chan M [2]
  • Du S [2]
  • Feng Y [2]
  • Gao C [2]
  • Guo X [2]
  • Huang W [2]
  • Jin R [2]
  • Li X [2]
  • Liu S [2]
  • Ma W [2]
  • Ma Y [2]
  • Matsui R [2]
  • Qin C [2]
  • Sahakyan H [2]
  • Shi R [2]
  • Song L [2]
  • Song W [2]
  • Su B [2]
  • Taddei A [2]
  • Tian M [2]
  • Wang J [2]
  • Wei Y [2]
  • Willegems K [2]
  • Wu J [2]
  • Xiao J [2]
  • Xiao T [2]
  • Xie XS [2]
  • Yisimayi A [2]
  • Yuan T [2]
  • Zhang N [2]
  • Zhang Z [2]
  • Cai J [1]
  • Cai R [1]
  • Cao K [1]
  • Chang Z [1]
  • Chen M [1]
  • Geng S [1]

Author by ORCID

  • Zheng W [6]
  • Dou Y [6]
  • Dou Y [6]
  • Fedida D [4]
  • Eldstrom J [4]
  • Van Petegem F [4]
  • Kim H [3]
  • Lee YT [3]
  • Cho US [3]
  • Park SH [3]
  • Jensen TH [2]
  • Feng Y [2]
  • Cao Y [2]
  • Xie XS [2]
  • Sastre D [2]
  • Wang Y [2]
  • Lorenzo A [2]
  • Rouviere JO [2]
  • Wei Y [2]
  • Huang W [2]
  • Brennecke J [2]
  • Maragliano L [2]
  • Plaschka C [2]
  • Molinarolo S [2]
  • Andersen JS [2]
  • Gao C [2]
  • Kyriakis E [2]
  • Xiao J [2]
  • Hohmann U [2]
  • Sahakyan H [2]
  • Dou Y [2]
  • Graf M [2]
  • Roscioni A [2]
  • Le Rest M [2]
  • Hu Z [1]
  • Xu B [1]
  • Wu Z [1]
  • Chen M [1]
  • Li M [1]
  • Wu X [1]
  • Wang Y [1]
  • Lou Z [1]
  • Wu Y [1]
  • Yang Q [1]
  • Hu J [1]
  • Long J [1]
  • Dou Y [1]
  • Liang S [1]
  • Zou Q [1]
  • Zhu L [1]
  • Yang X [1]
  • Meng S [1]
  • Zhu K [1]
  • Geng S [1]

Journal

  • NAT COMMUN [10]
  • NATURE [7]
  • TO BE PUBLISHED [7]
  • ANTIB THER [6]
  • BIOCHEMISTRY [2]
  • CELL RES [2]
  • SCI ADV [2]
  • SCI TRANSL MED [1]

Software

  • CRYOSPARC [13]
  • CTFFIND [2]

Microscope

  • TFS KRIOS [19]
  • FEI TITAN KRIOS [18]

Electron Source

  • FIELD EMISSION GUN [37]

Film or detector model

  • FEI FALCON IV 4K X 4K [12]
  • GATAN K3 6K X 4K [9]
  • GATAN K2 SUMMIT 4K X 4K [8]
  • GATAN K2 QUANTUM 4K X 4K [7]
  • FEI FALCON III 4K X 4K [1]

External links

  • PDB [30]
  • PDBe-Kb [30]
  • UniProt [30]
  • AlphaFold DB [29]
  • Pfam [29]
  • Gene Ontology [27]
  • InterPro [23]
  • Complex Portal [15]
  • ChEBI [13]
  • DrugBank [13]
  • ChEMBL [11]