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author:"Chen DH"

Filter By

Current Database

  • EMDB [99]
  • EMPIAR [1]

Current status

  • REL [100]

Sample type

  • Complex [63]
  • Protein [63]
  • Sample [27]
  • Ligand [18]
  • Virus [13]
  • Other [9]
  • RNA [9]
  • DNA [7]
  • Cellular component [6]

Organism

  • Saccharomyces cerevisiae [22]
  • Homo sapiens [16]
  • Human immunodeficiency virus 1 [14]
  • Chaetomium thermophilum [14]
  • Escherichia coli [10]
  • Salmonella phage p22 [8]
  • Rattus norvegicus [5]
  • Human immunodeficiency virus 1 [5]
  • Human herpesvirus 3 [4]
  • Danio rerio [4]
  • Synthetic construct [3]
  • Haliotis diversicolor [3]
  • Chikungunya virus [3]
  • Chaetomium thermophilum [3]
  • Escherichia coli [3]
  • Mus musculus [2]
  • Rhodospirillum rubrum [2]
  • Spodoptera frugiperda [2]
  • Human cytomegalovirus [1]
  • Human cytomegalovirus [1]
  • Brome mosaic virus [1]
  • Salmonella virus epsilon15 [1]
  • Singapore grouper iridovirus [1]
  • Aquifex aeolicus [1]
  • Xenopus laevis [1]

EM Method

  • Single-particle [93]
  • Tomography [5]
  • Helical reconstruction [1]

Resolution

  • ≥ 2Å and < 3Å [16]
  • ≥ 3Å and < 4Å [23]
  • ≥ 4Å and < 5Å [22]
  • ≥ 5Å and < 6Å [3]
  • ≥ 6Å and < 8Å [6]
  • ≥ 8Å and < 12Å [15]
  • ≥ 12Å and < 16Å [3]
  • ≥ 20Å and < 30Å [6]

Model molecular weight

  • 50-100 kDa [1]
  • 100-250 kDa [15]
  • 250-500 kDa [3]
  • 500-1000 kDa [10]
  • 1-2 MDa [4]
  • 2-5 MDa [1]
  • 5-10 MDa [1]
  • > 10 MDa [3]

Release Date

  • 2026 [19]
  • 2025 [13]
  • 2022 [1]
  • 2021 [9]
  • 2020 [10]
  • 2019 [10]
  • 2018 [3]
  • 2017 [7]
  • 2016 [4]
  • 2014 [1]
  • 2013 [5]
  • 2012 [2]
  • 2011 [5]
  • 2010 [1]
  • 2009 [3]
  • 2006 [6]
  • 2004 [1]

Author by name

  • Chen DH [77]
  • Chen D-H [38]
  • Chiu W [32]
  • Zhang J [21]
  • Bushnell DA [20]
  • Nagai S [19]
  • Yang C [19]
  • Kornberg RD [16]
  • Mattoo RUH [16]
  • Larsen KP [14]
  • Puglisi EV [14]
  • Ludtke SJ [13]
  • Tamir S [13]
  • Choi J [11]
  • Ha B [11]
  • Jackson LN [11]
  • Jakana J [11]
  • Kappel K [11]
  • Schmid MF [11]
  • Chuang DT [9]
  • Liao M [9]
  • Song JL [9]
  • Baker ML [8]
  • Hryc CF [8]
  • King JA [8]
  • Dougherty M [7]
  • Haase-pettingell C [7]
  • Jiang W [7]
  • Chew TA [6]
  • Dror RO [6]
  • Feng L [6]
  • Hollingsworth SA [6]
  • Latorraca NR [6]
  • Orlando BJ [6]
  • Puglisi JD [6]
  • Wang A [6]
  • Wang J [6]
  • Baker D [5]
  • Baumeister W [5]
  • Brunger AT [5]
  • Chen D [5]
  • Danev R [5]
  • Dimaio F [5]
  • Fukuda Y [5]
  • Gipson P [5]
  • Lai Y [5]
  • Song J-L [5]
  • Wu W [5]
  • Arvin AM [4]
  • Carfi A [4]
  • Liao MF [4]
  • Oliver SL [4]
  • Pintilie GD [4]
  • Roh SH [4]
  • Skiniotis G [4]
  • Sommer MH [4]
  • Xing Y [4]
  • Yang E [4]
  • Adams PD [3]
  • Afonine PV [3]
  • Bakkour S [3]
  • Barrero D [3]
  • Chafets D [3]
  • Chen DC [3]
  • Coey AT [3]
  • Cong Y [3]
  • Dai X [3]
  • Davis RE [3]
  • Diamond MS [3]
  • Doranz BJ [3]
  • Dougherty MT [3]
  • Fomin ME [3]
  • Fong RH [3]
  • Fox JM [3]
  • Fu Z [3]
  • Jin J [3]
  • Johnson AG [3]
  • Keating S [3]
  • Lapointe CP [3]
  • Lin Z [3]
  • Liss N [3]
  • Liss NM [3]
  • Madan D [3]
  • Madigan L [3]
  • Mathiharan YK [3]
  • Montabana E [3]
  • Muench MO [3]
  • Nie Y [3]
  • Petrov AN [3]
  • Prabhakar A [3]
  • Rye HS [3]
  • Schroder GF [3]
  • Sherman MB [3]
  • Shimak RM [3]
  • Simmons G [3]
  • Song J [3]
  • Wang C [3]
  • Wang L [3]
  • Wang Y [3]
  • Wang Z [3]

Author by ORCID

  • Chiu W [28]
  • Chen DH [24]
  • Mattoo RUH [16]
  • Larsen KP [14]
  • Ludtke SJ [13]
  • Kornberg RD [13]
  • Ha B [11]
  • Kappel K [11]
  • Jackson LN [11]
  • Schmid MF [10]
  • Yang C [9]
  • Chen D-H [9]
  • Nagai S [9]
  • Hryc CF [7]
  • Jiang W [6]
  • Dror RO [6]
  • Latorraca NR [6]
  • Hollingsworth SA [6]
  • Brunger AT [5]
  • Lai Y [5]
  • Fukuda Y [5]
  • Arvin AM [4]
  • Bushnell DA [4]
  • Pintilie GD [4]
  • Oliver SL [4]
  • Skiniotis G [4]
  • Sommer MH [3]
  • Muench MO [3]
  • Xing Y [3]
  • Johnson AG [3]
  • Dai X [3]
  • Puglisi EV [3]
  • Weaver J [3]
  • Prabhakar A [3]
  • Doranz BJ [3]
  • Keating S [3]
  • Rye HS [3]
  • Simmons G [3]
  • Zhang H [3]
  • Fox JM [3]
  • Schroder GF [3]
  • Roh SH [3]
  • Jin J [3]
  • Mathiharan YK [3]
  • Wang J [3]
  • Barrero D [3]
  • Adams PD [2]
  • Pintilie G [2]
  • Bammes BE [2]
  • Wang Z [2]
  • Dunn AR [1]
  • Johnson D [1]
  • Gammons MV [1]
  • Jardetzky TS [1]
  • Weis WI [1]
  • Kan W [1]
  • Korkmazhan E [1]
  • Bienz M [1]
  • Zhang J [1]
  • Bammes B [1]
  • Wittung-stafshede P [1]
  • Muennich S [1]
  • Wu J [1]
  • Enos MD [1]

Journal

  • TO BE PUBLISHED [20]
  • MOL CELL [16]
  • STRUCTURE [13]
  • NATURE [12]
  • PNAS [12]
  • J MOL BIOL [9]
  • NAT COMMUN [5]
  • CELL [3]
  • CELL REP [3]
  • PLOS PATHOG [3]
  • J STRUCT BIOL [2]
  • BIOPHYS J [1]
  • ELIFE [1]
  • MBIO [1]
  • NAT STRUCT MOL BIOL [1]

Software

  • RELION [32]
  • CRYOSPARC [21]
  • CTFFIND [19]
  • EMAN [14]
  • EMAN1 [5]
  • GCTF [5]
  • MPSA [5]
  • CHIMERA [3]
  • DIREX [3]
  • MULTI-PATH SIMULATED ANNEALING OPTIMIZATION ALGORITHM [3]
  • RELION_1.3 [2]
  • CTFFIND4 [1]
  • FOLDHUNTER [1]
  • FOLDHUNTER, EMAN [1]
  • JSPR [1]
  • MPSA, EMAN [1]
  • PHENIX [1]
  • RELION-1.3 [1]
  • UROX [1]

Microscope

  • FEI TITAN KRIOS [33]
  • TFS KRIOS [32]
  • JEOL 3200FSC [10]
  • FEI TECNAI F20 [8]
  • JEOL 2010F [8]
  • JEOL 3000SFF [8]

Electron Source

  • FIELD EMISSION GUN [99]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [28]
  • GATAN K3 6K X 4K [22]
  • GATAN K3 BIOQUANTUM 6K X 4K [13]
  • KODAK SO-163 FILM [11]
  • GATAN K2 QUANTUM 4K X 4K [6]
  • GENERIC GATAN 4K X 4K [6]
  • DIRECT ELECTRON DE-12 4K X 3K [3]
  • GATAN ULTRASCAN 10000 10K X 10K [3]
  • GENERIC GATAN [2]
  • TVIPS TEMCAM-F816 8K X 8K [2]
  • DIRECT ELECTRON DE-20 5K X 3K [1]
  • GATAN K2 4K X 4K [1]
  • GATAN ULTRASCAN 4000 4K X 4K [1]

EMPIAR Experiment type

  • EMDB [1]

EMPIAR Image category

  • PICKED PARTICLES - MULTIFRAME - PROCESSED [1]

External links

  • PDB [44]
  • UniProt [41]
  • PDBe-Kb [36]
  • AlphaFold DB [25]
  • Gene Ontology [19]
  • InterPro [19]
  • Pfam [15]
  • ChEBI [9]
  • DrugBank [8]
  • ChEMBL [7]
  • Complex Portal [6]
  • EMPIAR [3]
  • SCOP2 [3]
  • EMDB [1]
Sort by: Download
Showing 1 - 10 of 100. Page 1 of 10
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EMD-71492
Download Map
3D View
TBP/TFIIE/DNA of PIC-Med-SWI/SNF-Nucleosome
CryoEM
Focused map
Release date: Oct. 14, 2026
Resolution: 4.5 Å
EM Method: Single-particle
Fitted PDBs: 9pbw

Yang C, Nagai S, Chen D-H

To Be Published

EMD-71493
Download Map
3D View
TFIIH of PIC-Med-SWI/SNF-Nucleosome
Focused map
CryoEM
Release date: Oct. 14, 2026
Resolution: 4.7 Å
EM Method: Single-particle
Fitted PDBs: 9pby

Yang C, Nagai S, Chen D-H

To Be Published

EMD-71494
Download Map
3D View
PolII/TFIIF of PIC-Med-SWI/SNF-Nucleosome
Focused map
CryoEM
Release date: Oct. 14, 2026
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 9pbz

Yang C, Nagai S, Chen D-H

To Be Published

EMD-71517
Download Map
3D View
Tail of Mediator of PIC-Med-SWI/SNF
CryoEM
Focused map
Release date: Oct. 14, 2026
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 9pcr

Yang C, Nagai S, Chen D-H

To Be Published

EMD-71518
Download Map
3D View
Consensus map of Closed form of PIC-Med-SWI/SNF
CryoEM
Consensus map
Release date: Oct. 14, 2026
Resolution: 3.4 Å
EM Method: Single-particle

Yang C, Nagai S, Chen D-H

To Be Published

EMD-71519
Download Map
3D View
Consensus map of Open form of PIC-Med-SWI/SNF
CryoEM
Consensus map
Release date: Oct. 14, 2026
Resolution: 3.2 Å
EM Method: Single-particle

Yang C, Nagai S, Chen D-H

To Be Published

EMD-71520
Download Map
3D View
Consensus map of PIC-Med-SWI/SNF-Nucleosome
Consensus map
CryoEM
Release date: Oct. 14, 2026
Resolution: 2.9 Å
EM Method: Single-particle

Yang C, Nagai S, Chen D-H

To Be Published

EMD-71535
Download Map
3D View
Composite map of open form of PIC-Med-SWI/SNF
Composite map
CryoEM
Release date: Oct. 14, 2026
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 9pdj

Yang C, Nagai S, Chen D-H

To Be Published

EMD-71536
Download Map
3D View
Composite map of closed form of PIC-Med-SWI/SNF
Composite map
CryoEM
Release date: Oct. 14, 2026
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 9pdk

Yang C, Nagai S, Chen D-H

To Be Published

EMD-71541
Download Map
3D View
Composite map of PIC-Med-SWI/SNF-Nucleosome
Composite map
CryoEM
Release date: Oct. 14, 2026
Resolution: 2.84 Å
EM Method: Single-particle
Fitted PDBs: 9pdr

Yang C, Nagai S, Chen D-H

To Be Published

Sort by: Download
Showing 1 - 10 of 100. Page 1 of 10
Display:
Statistics
×

Download



Preview 10 entries View All Download file

Filter By

Current Database

  • EMDB [99]
  • EMPIAR [1]

Current status

  • REL [100]

Sample type

  • Complex [63]
  • Protein [63]
  • Sample [27]
  • Ligand [18]
  • Virus [13]
  • Other [9]
  • RNA [9]
  • DNA [7]
  • Cellular component [6]

Organism

  • Saccharomyces cerevisiae [22]
  • Homo sapiens [16]
  • Human immunodeficiency virus 1 [14]
  • Chaetomium thermophilum [14]
  • Escherichia coli [10]
  • Salmonella phage p22 [8]
  • Rattus norvegicus [5]
  • Human immunodeficiency virus 1 [5]
  • Human herpesvirus 3 [4]
  • Danio rerio [4]
  • Synthetic construct [3]
  • Haliotis diversicolor [3]
  • Chikungunya virus [3]
  • Chaetomium thermophilum [3]
  • Escherichia coli [3]
  • Mus musculus [2]
  • Rhodospirillum rubrum [2]
  • Spodoptera frugiperda [2]
  • Human cytomegalovirus [1]
  • Human cytomegalovirus [1]
  • Brome mosaic virus [1]
  • Salmonella virus epsilon15 [1]
  • Singapore grouper iridovirus [1]
  • Aquifex aeolicus [1]
  • Xenopus laevis [1]

EM Method

  • Single-particle [93]
  • Tomography [5]
  • Helical reconstruction [1]

Resolution

  • ≥ 2Å and < 3Å [16]
  • ≥ 3Å and < 4Å [23]
  • ≥ 4Å and < 5Å [22]
  • ≥ 5Å and < 6Å [3]
  • ≥ 6Å and < 8Å [6]
  • ≥ 8Å and < 12Å [15]
  • ≥ 12Å and < 16Å [3]
  • ≥ 20Å and < 30Å [6]

Model molecular weight

  • 50-100 kDa [1]
  • 100-250 kDa [15]
  • 250-500 kDa [3]
  • 500-1000 kDa [10]
  • 1-2 MDa [4]
  • 2-5 MDa [1]
  • 5-10 MDa [1]
  • > 10 MDa [3]

Release Date

  • 2026 [19]
  • 2025 [13]
  • 2022 [1]
  • 2021 [9]
  • 2020 [10]
  • 2019 [10]
  • 2018 [3]
  • 2017 [7]
  • 2016 [4]
  • 2014 [1]
  • 2013 [5]
  • 2012 [2]
  • 2011 [5]
  • 2010 [1]
  • 2009 [3]
  • 2006 [6]
  • 2004 [1]

Author by name

  • Chen DH [77]
  • Chen D-H [38]
  • Chiu W [32]
  • Zhang J [21]
  • Bushnell DA [20]
  • Nagai S [19]
  • Yang C [19]
  • Kornberg RD [16]
  • Mattoo RUH [16]
  • Larsen KP [14]
  • Puglisi EV [14]
  • Ludtke SJ [13]
  • Tamir S [13]
  • Choi J [11]
  • Ha B [11]
  • Jackson LN [11]
  • Jakana J [11]
  • Kappel K [11]
  • Schmid MF [11]
  • Chuang DT [9]
  • Liao M [9]
  • Song JL [9]
  • Baker ML [8]
  • Hryc CF [8]
  • King JA [8]
  • Dougherty M [7]
  • Haase-pettingell C [7]
  • Jiang W [7]
  • Chew TA [6]
  • Dror RO [6]
  • Feng L [6]
  • Hollingsworth SA [6]
  • Latorraca NR [6]
  • Orlando BJ [6]
  • Puglisi JD [6]
  • Wang A [6]
  • Wang J [6]
  • Baker D [5]
  • Baumeister W [5]
  • Brunger AT [5]
  • Chen D [5]
  • Danev R [5]
  • Dimaio F [5]
  • Fukuda Y [5]
  • Gipson P [5]
  • Lai Y [5]
  • Song J-L [5]
  • Wu W [5]
  • Arvin AM [4]
  • Carfi A [4]
  • Liao MF [4]
  • Oliver SL [4]
  • Pintilie GD [4]
  • Roh SH [4]
  • Skiniotis G [4]
  • Sommer MH [4]
  • Xing Y [4]
  • Yang E [4]
  • Adams PD [3]
  • Afonine PV [3]
  • Bakkour S [3]
  • Barrero D [3]
  • Chafets D [3]
  • Chen DC [3]
  • Coey AT [3]
  • Cong Y [3]
  • Dai X [3]
  • Davis RE [3]
  • Diamond MS [3]
  • Doranz BJ [3]
  • Dougherty MT [3]
  • Fomin ME [3]
  • Fong RH [3]
  • Fox JM [3]
  • Fu Z [3]
  • Jin J [3]
  • Johnson AG [3]
  • Keating S [3]
  • Lapointe CP [3]
  • Lin Z [3]
  • Liss N [3]
  • Liss NM [3]
  • Madan D [3]
  • Madigan L [3]
  • Mathiharan YK [3]
  • Montabana E [3]
  • Muench MO [3]
  • Nie Y [3]
  • Petrov AN [3]
  • Prabhakar A [3]
  • Rye HS [3]
  • Schroder GF [3]
  • Sherman MB [3]
  • Shimak RM [3]
  • Simmons G [3]
  • Song J [3]
  • Wang C [3]
  • Wang L [3]
  • Wang Y [3]
  • Wang Z [3]

Author by ORCID

  • Chiu W [28]
  • Chen DH [24]
  • Mattoo RUH [16]
  • Larsen KP [14]
  • Ludtke SJ [13]
  • Kornberg RD [13]
  • Ha B [11]
  • Kappel K [11]
  • Jackson LN [11]
  • Schmid MF [10]
  • Yang C [9]
  • Chen D-H [9]
  • Nagai S [9]
  • Hryc CF [7]
  • Jiang W [6]
  • Dror RO [6]
  • Latorraca NR [6]
  • Hollingsworth SA [6]
  • Brunger AT [5]
  • Lai Y [5]
  • Fukuda Y [5]
  • Arvin AM [4]
  • Bushnell DA [4]
  • Pintilie GD [4]
  • Oliver SL [4]
  • Skiniotis G [4]
  • Sommer MH [3]
  • Muench MO [3]
  • Xing Y [3]
  • Johnson AG [3]
  • Dai X [3]
  • Puglisi EV [3]
  • Weaver J [3]
  • Prabhakar A [3]
  • Doranz BJ [3]
  • Keating S [3]
  • Rye HS [3]
  • Simmons G [3]
  • Zhang H [3]
  • Fox JM [3]
  • Schroder GF [3]
  • Roh SH [3]
  • Jin J [3]
  • Mathiharan YK [3]
  • Wang J [3]
  • Barrero D [3]
  • Adams PD [2]
  • Pintilie G [2]
  • Bammes BE [2]
  • Wang Z [2]
  • Dunn AR [1]
  • Johnson D [1]
  • Gammons MV [1]
  • Jardetzky TS [1]
  • Weis WI [1]
  • Kan W [1]
  • Korkmazhan E [1]
  • Bienz M [1]
  • Zhang J [1]
  • Bammes B [1]
  • Wittung-stafshede P [1]
  • Muennich S [1]
  • Wu J [1]
  • Enos MD [1]

Journal

  • TO BE PUBLISHED [20]
  • MOL CELL [16]
  • STRUCTURE [13]
  • NATURE [12]
  • PNAS [12]
  • J MOL BIOL [9]
  • NAT COMMUN [5]
  • CELL [3]
  • CELL REP [3]
  • PLOS PATHOG [3]
  • J STRUCT BIOL [2]
  • BIOPHYS J [1]
  • ELIFE [1]
  • MBIO [1]
  • NAT STRUCT MOL BIOL [1]

Software

  • RELION [32]
  • CRYOSPARC [21]
  • CTFFIND [19]
  • EMAN [14]
  • EMAN1 [5]
  • GCTF [5]
  • MPSA [5]
  • CHIMERA [3]
  • DIREX [3]
  • MULTI-PATH SIMULATED ANNEALING OPTIMIZATION ALGORITHM [3]
  • RELION_1.3 [2]
  • CTFFIND4 [1]
  • FOLDHUNTER [1]
  • FOLDHUNTER, EMAN [1]
  • JSPR [1]
  • MPSA, EMAN [1]
  • PHENIX [1]
  • RELION-1.3 [1]
  • UROX [1]

Microscope

  • FEI TITAN KRIOS [33]
  • TFS KRIOS [32]
  • JEOL 3200FSC [10]
  • FEI TECNAI F20 [8]
  • JEOL 2010F [8]
  • JEOL 3000SFF [8]

Electron Source

  • FIELD EMISSION GUN [99]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [28]
  • GATAN K3 6K X 4K [22]
  • GATAN K3 BIOQUANTUM 6K X 4K [13]
  • KODAK SO-163 FILM [11]
  • GATAN K2 QUANTUM 4K X 4K [6]
  • GENERIC GATAN 4K X 4K [6]
  • DIRECT ELECTRON DE-12 4K X 3K [3]
  • GATAN ULTRASCAN 10000 10K X 10K [3]
  • GENERIC GATAN [2]
  • TVIPS TEMCAM-F816 8K X 8K [2]
  • DIRECT ELECTRON DE-20 5K X 3K [1]
  • GATAN K2 4K X 4K [1]
  • GATAN ULTRASCAN 4000 4K X 4K [1]

EMPIAR Experiment type

  • EMDB [1]

EMPIAR Image category

  • PICKED PARTICLES - MULTIFRAME - PROCESSED [1]

External links

  • PDB [44]
  • UniProt [41]
  • PDBe-Kb [36]
  • AlphaFold DB [25]
  • Gene Ontology [19]
  • InterPro [19]
  • Pfam [15]
  • ChEBI [9]
  • DrugBank [8]
  • ChEMBL [7]
  • Complex Portal [6]
  • EMPIAR [3]
  • SCOP2 [3]
  • EMDB [1]