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author:"Cao D"

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Current Database

  • EMDB [85]

Current status

  • REL [85]

Sample type

  • Complex [85]
  • Protein [43]
  • Ligand [25]
  • RNA [6]
  • DNA [3]

Organism

  • Semliki forest virus [18]
  • Homo sapiens [14]
  • Escherichia coli [12]
  • Eastern equine encephalitis virus [11]
  • Human respiratory syncytial virus [6]
  • Western equine encephalitis virus [5]
  • Arabidopsis thaliana [5]
  • Middle east respiratory syndrome-related coronavirus [3]
  • Nipah virus [3]
  • Chlamydomonas reinhardtii [3]
  • Escherichia virus t7 [2]
  • Synechococcus elongatus [2]
  • Enterococcus faecalis [2]
  • Thermosynechococcus elongatus [2]
  • Severe acute respiratory syndrome coronavirus [2]
  • Severe acute respiratory syndrome coronavirus [2]
  • Camelus bactrianus [2]
  • Human respiratory syncytial virus [1]
  • Severe acute respiratory syndrome coronavirus [1]
  • Severe acute respiratory syndrome coronavirus [1]
  • Spodoptera frugiperda [1]

EM Method

  • Single-particle [85]

Resolution

  • ≥ 2Å and < 3Å [6]
  • ≥ 3Å and < 4Å [43]
  • ≥ 4Å and < 5Å [20]
  • ≥ 5Å and < 6Å [6]
  • ≥ 6Å and < 8Å [9]
  • ≥ 8Å and < 12Å [1]

Model molecular weight

  • 100-250 kDa [8]
  • 250-500 kDa [23]
  • 500-1000 kDa [10]
  • 1-2 MDa [1]
  • 2-5 MDa [2]

Release Date

  • 2026 [4]
  • 2025 [8]
  • 2024 [19]
  • 2023 [22]
  • 2022 [9]
  • 2020 [18]
  • 2017 [5]

Author by name

  • Cao D [85]
  • Zhang X [71]
  • Cao Z [34]
  • Ma B [34]
  • Xiang Y [34]
  • Gao Y [17]
  • Liu S [13]
  • Xu X [13]
  • Chen Z [12]
  • Feng H [10]
  • Gao P [10]
  • Liang B [10]
  • Luo X [10]
  • Yan XX [10]
  • Zhu J [10]
  • Li M [9]
  • Su X [9]
  • Cao W [8]
  • Li J [8]
  • Wu C [8]
  • Zhang XZ [8]
  • Zhu D [8]
  • Cao WL [7]
  • Liu Z [7]
  • Pan X [7]
  • Roesler C [7]
  • Wang Q [7]
  • Zhu DJ [7]
  • Gooneratne I [6]
  • Mera C [6]
  • Zhang Y [6]
  • Bassi R [5]
  • Dall Osto L [5]
  • Ding W [5]
  • Fan X [5]
  • Gao GF [5]
  • Lu G [5]
  • Ma J [5]
  • Qi J [5]
  • Shi L [5]
  • Shi Y [5]
  • Slack J [5]
  • Wang H [5]
  • Wu Y [5]
  • Yan J [5]
  • Yuan Y [5]
  • Zhuang L [5]
  • Berry J [4]
  • Nudell-cook E [4]
  • Pan XW [4]
  • Royal M [4]
  • Shaik M [4]
  • Vy J [4]
  • Youngs R [4]
  • Antonova A [3]
  • Buffalo CZ [3]
  • Chen N [3]
  • Chen ZH [3]
  • Cheng J [3]
  • Clifton MC [3]
  • D Cunha P [3]
  • Deniston C [3]
  • Didonato M [3]
  • Hua T [3]
  • Hunt J [3]
  • Jarrousse N [3]
  • Li F [3]
  • Liu J [3]
  • Liu ZJ [3]
  • Patra D [3]
  • Quirit Dudley J [3]
  • Rice S [3]
  • Rohaim A [3]
  • Romanelli S [3]
  • Sengupta D [3]
  • Spraggon G [3]
  • Straimer J [3]
  • Tsang T [3]
  • Wang J [3]
  • Wang JJ [3]
  • Wang S [3]
  • Wang T [3]
  • Wen L [3]
  • Wu L [3]
  • Wu LJ [3]
  • Wu M [3]
  • Xie L [3]
  • Xu Y [3]
  • Zhao S [3]
  • Cao DF [2]
  • Cao P [2]
  • Chang W [2]
  • Han X [2]
  • Katta D [2]
  • Lemons W [2]
  • Liu L [2]
  • Mi H [2]
  • Ramanathan A [2]
  • Si L [2]
  • Tian L [2]

Author by ORCID

  • Zhang X [34]
  • Cao D [29]
  • Xiang Y [29]
  • Cao D [10]
  • Gao P [10]
  • Liang B [10]
  • Yan XX [10]
  • Li M [9]
  • Wu C [8]
  • Zhu D [8]
  • Li J [8]
  • Cao W [8]
  • Chen Z [7]
  • Gao Y [7]
  • Gooneratne I [6]
  • Dall'osto L [5]
  • Ma J [5]
  • Zhao S [3]
  • Chen Z [3]
  • Cheng J [3]
  • Xie L [3]
  • Hua T [3]
  • Didonato M [3]
  • Wang S [3]
  • Patra D [3]
  • Fan X [3]
  • Pan X [2]
  • Tian L [2]
  • Si L [2]
  • Katta D [2]
  • Zhang Y [1]
  • Slack J [1]
  • Roesler C [1]
  • Jin Z [1]
  • Juneja P [1]
  • Fan S [1]

Journal

  • NAT COMMUN [30]
  • CELL [19]
  • NAT MICROBIOL [10]
  • SCI ADV [8]
  • CELL REP [5]
  • MOL PLANT [5]
  • CELL RES [2]
  • NAT PLANTS [2]
  • NATURE [2]
  • TO BE PUBLISHED [2]
  • FRONT MED [1]

Software

  • CRYOSPARC [6]
  • RELION [5]
  • COOT [4]
  • PHENIX [1]
  • UCSF CHIMERAX [1]

Microscope

  • FEI TITAN KRIOS [52]
  • FEI TECNAI ARCTICA [15]
  • TFS KRIOS [12]
  • FEI TALOS ARCTICA [3]
  • FEI TITAN [2]
  • FEI MORGAGNI [1]

Electron Source

  • FIELD EMISSION GUN [85]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [64]
  • GATAN K3 6K X 4K [15]
  • GATAN K2 QUANTUM 4K X 4K [4]
  • DIRECT ELECTRON DE-16 4K X 4K [1]
  • GATAN K3 BIOQUANTUM 6K X 4K [1]

External links

  • PDB [85]
  • UniProt [43]
  • PDBe-Kb [39]
  • Gene Ontology [35]
  • InterPro [35]
  • AlphaFold DB [30]
  • Pfam [28]
  • ChEBI [23]
  • ChEMBL [17]
  • DrugBank [15]
  • Complex Portal [10]
  • SCOP2 [7]
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EMD-71611
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3D View
Cryo-EM structure of the respiratory syncytial virus polymerase L:P in NTP-bound elongation state
CryoEM
Release date: May 6, 2026
Resolution: 3.08 Å
EM Method: Single-particle
Fitted PDBs: 9pfr
Q-score: 0.519

Cao D, Chen Z, Gao Y, Roesler C, Gooneratne I, Mera C, Zhuang L, Slack J, Nudell-Cook E, Vy J, Berry J, Royal M, Shaik M, Youngs R, Liang B

Nat Commun (2026) [ DOI: doi:10.1038/s41467-026-72519-0 Pubmed: 42049741 ]

EMD-71612
Download Map
3D View
Cryo-EM structure of the respiratory syncytial virus polymerase L:P in pre-reaction elongation state
CryoEM
Release date: May 6, 2026
Resolution: 2.75 Å
EM Method: Single-particle
Fitted PDBs: 9pfs
Q-score: 0.562

Cao D, Chen Z, Gao Y, Roesler C, Gooneratne I, Mera C, Zhuang L, Slack J, Nudell-Cook E, Vy J, Berry J, Royal M, Shaik M, Youngs R, Liang B

Nat Commun (2026) [ DOI: doi:10.1038/s41467-026-72519-0 Pubmed: 42049741 ]

EMD-71613
Download Map
3D View
Cryo-EM structure of the respiratory syncytial virus polymerase L:P in pre-translocation elongation state
CryoEM
Release date: May 6, 2026
Resolution: 3.07 Å
EM Method: Single-particle
Fitted PDBs: 9pft
Q-score: 0.545

Cao D, Chen Z, Gao Y, Roesler C, Gooneratne I, Mera C, Zhuang L, Slack J, Nudell-Cook E, Vy J, Berry J, Royal M, Shaik M, Youngs R, Liang B

Nat Commun (2026) [ DOI: doi:10.1038/s41467-026-72519-0 Pubmed: 42049741 ]

EMD-71614
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3D View
Cryo-EM structure of the respiratory syncytial virus polymerase L:P in post-translocation elongation state
CryoEM
Release date: May 6, 2026
Resolution: 3.54 Å
EM Method: Single-particle
Fitted PDBs: 9pfu
Q-score: 0.45

Cao D, Chen Z, Gao Y, Roesler C, Gooneratne I, Mera C, Zhuang L, Slack J, Nudell-Cook E, Vy J, Berry J, Royal M, Shaik M, Youngs R, Liang B

Nat Commun (2026) [ DOI: doi:10.1038/s41467-026-72519-0 Pubmed: 42049741 ]

EMD-45896
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3D View
cryo-EM structure of the Nipah virus polymerase containing the connecting domain
CryoEM
Release date: July 30, 2025
Resolution: 2.99 Å
EM Method: Single-particle
Fitted PDBs: 9mzh

Chen Z, Quirit Dudley J, Deniston C, Buffalo CZ, Patra D, Cao D, Hunt J, Rohaim A, Sengupta D, Wen L, Tsang T, Xie L, DiDonato M, Spraggon G, Clifton MC, Jarrousse N, Straimer J, Liang B

Nat Commun (2025) 16 pp. 6655-6655 [ Pubmed: 40683863 DOI: doi:10.1038/s41467-025-61764-4 ]

EMD-48649
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3D View
Cryo-EM structure of a truncated Nipah virus Malaysia Strain L:P complex
CryoEM
Release date: July 30, 2025
Resolution: 2.99 Å
EM Method: Single-particle
Fitted PDBs: 9muw
Q-score: 0.532

Chen Z, Quirit Dudley J, Deniston C, Buffalo CZ, Patra D, Cao D, Hunt J, Rohaim A, Sengupta D, Wen L, Tsang T, Xie L, DiDonato M, Spraggon G, Clifton MC, Jarrousse N, Straimer J, Liang B

Nat Commun (2025) 16 pp. 6655-6655 [ Pubmed: 40683863 DOI: doi:10.1038/s41467-025-61764-4 ]

EMD-45782
Download Map
3D View
Cryo-EM structure of the Nipah virus Malaysia Strain L:P complex
CryoEM
Release date: July 23, 2025
Resolution: 2.92 Å
EM Method: Single-particle
Fitted PDBs: 9cok
Q-score: 0.545

Chen Z, Quirit Dudley J, Deniston C, Buffalo CZ, Patra D, Cao D, Hunt J, Rohaim A, Sengupta D, Wen L, Tsang T, Xie L, DiDonato M, Spraggon G, Clifton MC, Jarrousse N, Straimer J, Liang B

Nat Commun (2025) 16 pp. 6655-6655 [ Pubmed: 40683863 DOI: doi:10.1038/s41467-025-61764-4 ]

EMD-62749
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3D View
Structure of Western equine encephalitis virus 71V1658 strain VLP in complex with human PCDH10 EC1
CryoEM
Release date: June 4, 2025
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 9l1n
Q-score: 0.435

Ma B, Cao Z, Ding W, Zhang X, Xiang Y, Cao D

Cell Rep (2025) 44 pp. 115724-115724 [ DOI: doi:10.1016/j.celrep.2025.115724 Pubmed: 40402741 ]

EMD-62898
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Structure of Western equine encephalitis virus McMillan strain in complex with VLDLR LA1-2
CryoEM
Release date: June 4, 2025
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 9l99
Q-score: 0.504

Ma B, Cao Z, Ding W, Zhang X, Xiang Y, Cao D

Cell Rep (2025) 44 pp. 115724-115724 [ DOI: doi:10.1016/j.celrep.2025.115724 Pubmed: 40402741 ]

EMD-62899
Download Map
3D View
Structure of Western equine encephalitis virus McMillan strain in complex with VLDLR LA2-3
CryoEM
Release date: June 4, 2025
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 9l9a
Q-score: 0.464

Ma B, Cao Z, Ding W, Zhang X, Xiang Y, Cao D

Cell Rep (2025) 44 pp. 115724-115724 [ DOI: doi:10.1016/j.celrep.2025.115724 Pubmed: 40402741 ]

Sort by: Download
Showing 1 - 10 of 85. Page 1 of 9
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [85]

Current status

  • REL [85]

Sample type

  • Complex [85]
  • Protein [43]
  • Ligand [25]
  • RNA [6]
  • DNA [3]

Organism

  • Semliki forest virus [18]
  • Homo sapiens [14]
  • Escherichia coli [12]
  • Eastern equine encephalitis virus [11]
  • Human respiratory syncytial virus [6]
  • Western equine encephalitis virus [5]
  • Arabidopsis thaliana [5]
  • Middle east respiratory syndrome-related coronavirus [3]
  • Nipah virus [3]
  • Chlamydomonas reinhardtii [3]
  • Escherichia virus t7 [2]
  • Synechococcus elongatus [2]
  • Enterococcus faecalis [2]
  • Thermosynechococcus elongatus [2]
  • Severe acute respiratory syndrome coronavirus [2]
  • Severe acute respiratory syndrome coronavirus [2]
  • Camelus bactrianus [2]
  • Human respiratory syncytial virus [1]
  • Severe acute respiratory syndrome coronavirus [1]
  • Severe acute respiratory syndrome coronavirus [1]
  • Spodoptera frugiperda [1]

EM Method

  • Single-particle [85]

Resolution

  • ≥ 2Å and < 3Å [6]
  • ≥ 3Å and < 4Å [43]
  • ≥ 4Å and < 5Å [20]
  • ≥ 5Å and < 6Å [6]
  • ≥ 6Å and < 8Å [9]
  • ≥ 8Å and < 12Å [1]

Model molecular weight

  • 100-250 kDa [8]
  • 250-500 kDa [23]
  • 500-1000 kDa [10]
  • 1-2 MDa [1]
  • 2-5 MDa [2]

Release Date

  • 2026 [4]
  • 2025 [8]
  • 2024 [19]
  • 2023 [22]
  • 2022 [9]
  • 2020 [18]
  • 2017 [5]

Author by name

  • Cao D [85]
  • Zhang X [71]
  • Cao Z [34]
  • Ma B [34]
  • Xiang Y [34]
  • Gao Y [17]
  • Liu S [13]
  • Xu X [13]
  • Chen Z [12]
  • Feng H [10]
  • Gao P [10]
  • Liang B [10]
  • Luo X [10]
  • Yan XX [10]
  • Zhu J [10]
  • Li M [9]
  • Su X [9]
  • Cao W [8]
  • Li J [8]
  • Wu C [8]
  • Zhang XZ [8]
  • Zhu D [8]
  • Cao WL [7]
  • Liu Z [7]
  • Pan X [7]
  • Roesler C [7]
  • Wang Q [7]
  • Zhu DJ [7]
  • Gooneratne I [6]
  • Mera C [6]
  • Zhang Y [6]
  • Bassi R [5]
  • Dall Osto L [5]
  • Ding W [5]
  • Fan X [5]
  • Gao GF [5]
  • Lu G [5]
  • Ma J [5]
  • Qi J [5]
  • Shi L [5]
  • Shi Y [5]
  • Slack J [5]
  • Wang H [5]
  • Wu Y [5]
  • Yan J [5]
  • Yuan Y [5]
  • Zhuang L [5]
  • Berry J [4]
  • Nudell-cook E [4]
  • Pan XW [4]
  • Royal M [4]
  • Shaik M [4]
  • Vy J [4]
  • Youngs R [4]
  • Antonova A [3]
  • Buffalo CZ [3]
  • Chen N [3]
  • Chen ZH [3]
  • Cheng J [3]
  • Clifton MC [3]
  • D Cunha P [3]
  • Deniston C [3]
  • Didonato M [3]
  • Hua T [3]
  • Hunt J [3]
  • Jarrousse N [3]
  • Li F [3]
  • Liu J [3]
  • Liu ZJ [3]
  • Patra D [3]
  • Quirit Dudley J [3]
  • Rice S [3]
  • Rohaim A [3]
  • Romanelli S [3]
  • Sengupta D [3]
  • Spraggon G [3]
  • Straimer J [3]
  • Tsang T [3]
  • Wang J [3]
  • Wang JJ [3]
  • Wang S [3]
  • Wang T [3]
  • Wen L [3]
  • Wu L [3]
  • Wu LJ [3]
  • Wu M [3]
  • Xie L [3]
  • Xu Y [3]
  • Zhao S [3]
  • Cao DF [2]
  • Cao P [2]
  • Chang W [2]
  • Han X [2]
  • Katta D [2]
  • Lemons W [2]
  • Liu L [2]
  • Mi H [2]
  • Ramanathan A [2]
  • Si L [2]
  • Tian L [2]

Author by ORCID

  • Zhang X [34]
  • Cao D [29]
  • Xiang Y [29]
  • Cao D [10]
  • Gao P [10]
  • Liang B [10]
  • Yan XX [10]
  • Li M [9]
  • Wu C [8]
  • Zhu D [8]
  • Li J [8]
  • Cao W [8]
  • Chen Z [7]
  • Gao Y [7]
  • Gooneratne I [6]
  • Dall'osto L [5]
  • Ma J [5]
  • Zhao S [3]
  • Chen Z [3]
  • Cheng J [3]
  • Xie L [3]
  • Hua T [3]
  • Didonato M [3]
  • Wang S [3]
  • Patra D [3]
  • Fan X [3]
  • Pan X [2]
  • Tian L [2]
  • Si L [2]
  • Katta D [2]
  • Zhang Y [1]
  • Slack J [1]
  • Roesler C [1]
  • Jin Z [1]
  • Juneja P [1]
  • Fan S [1]

Journal

  • NAT COMMUN [30]
  • CELL [19]
  • NAT MICROBIOL [10]
  • SCI ADV [8]
  • CELL REP [5]
  • MOL PLANT [5]
  • CELL RES [2]
  • NAT PLANTS [2]
  • NATURE [2]
  • TO BE PUBLISHED [2]
  • FRONT MED [1]

Software

  • CRYOSPARC [6]
  • RELION [5]
  • COOT [4]
  • PHENIX [1]
  • UCSF CHIMERAX [1]

Microscope

  • FEI TITAN KRIOS [52]
  • FEI TECNAI ARCTICA [15]
  • TFS KRIOS [12]
  • FEI TALOS ARCTICA [3]
  • FEI TITAN [2]
  • FEI MORGAGNI [1]

Electron Source

  • FIELD EMISSION GUN [85]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [64]
  • GATAN K3 6K X 4K [15]
  • GATAN K2 QUANTUM 4K X 4K [4]
  • DIRECT ELECTRON DE-16 4K X 4K [1]
  • GATAN K3 BIOQUANTUM 6K X 4K [1]

External links

  • PDB [85]
  • UniProt [43]
  • PDBe-Kb [39]
  • Gene Ontology [35]
  • InterPro [35]
  • AlphaFold DB [30]
  • Pfam [28]
  • ChEBI [23]
  • ChEMBL [17]
  • DrugBank [15]
  • Complex Portal [10]
  • SCOP2 [7]