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author:"Bianchi M"

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Current Database

  • EMDB [87]

Current status

  • REL [87]

Sample type

  • Complex [87]
  • Ligand [1]
  • Protein [1]

Organism

  • Human immunodeficiency virus 1 [68]
  • Macaca mulatta [67]
  • Human immunodeficiency virus [10]
  • Oryctolagus cuniculus [10]
  • Homo sapiens [1]

EM Method

  • Single-particle [87]

Resolution

  • ≥ 3Å and < 4Å [1]
  • ≥ 4Å and < 5Å [7]
  • ≥ 12Å and < 16Å [2]
  • ≥ 16Å and < 20Å [10]
  • ≥ 20Å and < 30Å [66]
  • ≥ 30Å [1]

Model molecular weight

  • 100-250 kDa [1]
  • 250-500 kDa [1]

Release Date

  • 2020 [67]
  • 2019 [3]
  • 2018 [17]

Author by name

  • Bianchi M [87]
  • Burton DR [87]
  • Cottrell CA [87]
  • Hangartner L [87]
  • Nogal B [87]
  • Turner HL [87]
  • Ward AB [87]
  • Kirchdoerfer RN [67]
  • Sewall LM [67]
  • Sok D [67]
  • Zhao F [67]
  • Bastidas R [20]
  • Mccoy LE [20]
  • Nedellec R [20]
  • Oyen D [20]
  • Pauthner M [20]
  • Wilson IA [20]
  • Cottrell C [2]

Author by ORCID

  • Cottrell CA [87]
  • Kirchdoerfer RN [67]
  • Pauthner M [20]
  • Mccoy LE [20]
  • Bianchi M [20]

Journal

  • CELL REP [67]
  • IMMUNITY [20]

Software

  • RELION [29]
  • CTFFIND [10]
  • CRYOSPARC [7]

Microscope

  • FEI TECNAI SPIRIT [69]
  • FEI TECNAI 12 [10]
  • FEI TECNAI ARCTICA [6]
  • FEI TALOS ARCTICA [1]
  • FEI TITAN KRIOS [1]

Electron Source

  • LAB6 [79]
  • FIELD EMISSION GUN [8]

Film or detector model

  • OTHER [66]
  • TVIPS TEMCAM-F416 4K X 4K [13]
  • GATAN K2 SUMMIT 4K X 4K [8]

External links

  • PDB [2]
  • AlphaFold DB [1]
  • ChEBI [1]
  • ChEMBL [1]
  • Gene Ontology [1]
  • InterPro [1]
  • PDBe-Kb [1]
  • Pfam [1]
  • UniProt [1]
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Showing 1 - 10 of 87. Page 1 of 9
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EMD-20396
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Cryo-EM Reconstruction of Polyclonal Serum Fab From a Protected Rhesus Macaque Complexed with BG505 SOSIP.664
CryoEM
Release date: April 1, 2020
Resolution: 3.87 Å
EM Method: Single-particle
Fitted PDBs: 6v0r
Q-score: 0.45
Similar entry percentile: 78%

Nogal B, Bianchi M, Cottrell CA, Kirchdoerfer RN, Sewall LM, Turner HL, Zhao F, Sok D, Burton DR, Hangartner L, Ward AB

Cell Rep (2020) 30 pp. 3755-3765.e7 [ Pubmed: 32187547 DOI: doi:10.1016/j.celrep.2020.02.061 ]

EMD-20399
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3D View
Unimmunized control rhesus macaque BZ05 challenged with SHIV serum fab complexed with BG505 SOSIP.664 trimer
Negative staining
Release date: April 1, 2020
Resolution: 16.4 Å
EM Method: Single-particle

Nogal B, Bianchi M, Cottrell CA, Kirchdoerfer RN, Sewall LM, Turner HL, Zhao F, Sok D, Burton DR, Hangartner L, Ward AB

Cell Rep (2020) 30 pp. 3755-3765.e7 [ Pubmed: 32187547 DOI: doi:10.1016/j.celrep.2020.02.061 ]

EMD-20400
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3D View
Unimmunized control rhesus macaque BZ11 challenged with SHIV serum fab complexed with BG505 SOSIP.664 trimer
Negative staining
Release date: April 1, 2020
Resolution: 26.8 Å
EM Method: Single-particle

Nogal B, Bianchi M, Cottrell CA, Kirchdoerfer RN, Sewall LM, Turner HL, Zhao F, Sok D, Burton DR, Hangartner L, Ward AB

Cell Rep (2020) 30 pp. 3755-3765.e7 [ Pubmed: 32187547 DOI: doi:10.1016/j.celrep.2020.02.061 ]

EMD-20401
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3D View
Unimmunized control rhesus macaque BZ13 challenged with SHIV serum fab complexed with BG505 SOSIP.664 trimer
Negative staining
Release date: April 1, 2020
Resolution: 32.8 Å
EM Method: Single-particle

Nogal B, Bianchi M, Cottrell CA, Kirchdoerfer RN, Sewall LM, Turner HL, Zhao F, Sok D, Burton DR, Hangartner L, Ward AB

Cell Rep (2020) 30 pp. 3755-3765.e7 [ Pubmed: 32187547 DOI: doi:10.1016/j.celrep.2020.02.061 ]

EMD-20402
Download Map
3D View
BG505-immunized rhesus macaque 12-060 wk 0 serum fab complexed with BG505 SOSIP.664 trimer
Negative staining
Release date: April 1, 2020
Resolution: 22.7 Å
EM Method: Single-particle

Nogal B, Bianchi M, Cottrell CA, Kirchdoerfer RN, Sewall LM, Turner HL, Zhao F, Sok D, Burton DR, Hangartner L, Ward AB

Cell Rep (2020) 30 pp. 3755-3765.e7 [ Pubmed: 32187547 DOI: doi:10.1016/j.celrep.2020.02.061 ]

EMD-20403
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3D View
BG505-immunized rhesus macaque 12-065 wk 0 serum fab complexed with BG505 SOSIP.664 trimer
Negative staining
Release date: April 1, 2020
Resolution: 24.6 Å
EM Method: Single-particle

Nogal B, Bianchi M, Cottrell CA, Kirchdoerfer RN, Sewall LM, Turner HL, Zhao F, Sok D, Burton DR, Hangartner L, Ward AB

Cell Rep (2020) 30 pp. 3755-3765.e7 [ Pubmed: 32187547 DOI: doi:10.1016/j.celrep.2020.02.061 ]

EMD-20404
Download Map
3D View
BG505-immunized rhesus macaque OQ7 wk 0 serum fab complexed with BG505 SOSIP.664 trimer
Negative staining
Release date: April 1, 2020
Resolution: 26.8 Å
EM Method: Single-particle

Nogal B, Bianchi M, Cottrell CA, Kirchdoerfer RN, Sewall LM, Turner HL, Zhao F, Sok D, Burton DR, Hangartner L, Ward AB

Cell Rep (2020) 30 pp. 3755-3765.e7 [ Pubmed: 32187547 DOI: doi:10.1016/j.celrep.2020.02.061 ]

EMD-20405
Download Map
3D View
BG505-immunized rhesus macaque 12-153 wk 0 serum fab complexed with BG505 SOSIP.664 trimer
Negative staining
Release date: April 1, 2020
Resolution: 24.6 Å
EM Method: Single-particle

Nogal B, Bianchi M, Cottrell CA, Kirchdoerfer RN, Sewall LM, Turner HL, Zhao F, Sok D, Burton DR, Hangartner L, Ward AB

Cell Rep (2020) 30 pp. 3755-3765.e7 [ Pubmed: 32187547 DOI: doi:10.1016/j.celrep.2020.02.061 ]

EMD-20409
Download Map
3D View
BG505-immunized rhesus macaque 12M-248 wk 0 serum fab complexed with BG505 SOSIP.664 trimer
Negative staining
Release date: April 1, 2020
Resolution: 28.7 Å
EM Method: Single-particle

Nogal B, Bianchi M, Cottrell CA, Kirchdoerfer RN, Sewall LM, Turner HL, Zhao F, Sok D, Burton DR, Hangartner L, Ward AB

Cell Rep (2020) 30 pp. 3755-3765.e7 [ Pubmed: 32187547 DOI: doi:10.1016/j.celrep.2020.02.061 ]

EMD-20410
Download Map
3D View
BG505-immunized rhesus macaque 12-149 wk 0 serum fab complexed with BG505 SOSIP.664 trimer
Negative staining
Release date: April 1, 2020
Resolution: 29.5 Å
EM Method: Single-particle

Nogal B, Bianchi M, Cottrell CA, Kirchdoerfer RN, Sewall LM, Turner HL, Zhao F, Sok D, Burton DR, Hangartner L, Ward AB

Cell Rep (2020) 30 pp. 3755-3765.e7 [ Pubmed: 32187547 DOI: doi:10.1016/j.celrep.2020.02.061 ]

Sort by: Download
Showing 1 - 10 of 87. Page 1 of 9
Display:
Statistics
×

Download


Preview 10 entries View All Download file

Filter By

Current Database

  • EMDB [87]

Current status

  • REL [87]

Sample type

  • Complex [87]
  • Ligand [1]
  • Protein [1]

Organism

  • Human immunodeficiency virus 1 [68]
  • Macaca mulatta [67]
  • Human immunodeficiency virus [10]
  • Oryctolagus cuniculus [10]
  • Homo sapiens [1]

EM Method

  • Single-particle [87]

Resolution

  • ≥ 3Å and < 4Å [1]
  • ≥ 4Å and < 5Å [7]
  • ≥ 12Å and < 16Å [2]
  • ≥ 16Å and < 20Å [10]
  • ≥ 20Å and < 30Å [66]
  • ≥ 30Å [1]

Model molecular weight

  • 100-250 kDa [1]
  • 250-500 kDa [1]

Release Date

  • 2020 [67]
  • 2019 [3]
  • 2018 [17]

Author by name

  • Bianchi M [87]
  • Burton DR [87]
  • Cottrell CA [87]
  • Hangartner L [87]
  • Nogal B [87]
  • Turner HL [87]
  • Ward AB [87]
  • Kirchdoerfer RN [67]
  • Sewall LM [67]
  • Sok D [67]
  • Zhao F [67]
  • Bastidas R [20]
  • Mccoy LE [20]
  • Nedellec R [20]
  • Oyen D [20]
  • Pauthner M [20]
  • Wilson IA [20]
  • Cottrell C [2]

Author by ORCID

  • Cottrell CA [87]
  • Kirchdoerfer RN [67]
  • Pauthner M [20]
  • Mccoy LE [20]
  • Bianchi M [20]

Journal

  • CELL REP [67]
  • IMMUNITY [20]

Software

  • RELION [29]
  • CTFFIND [10]
  • CRYOSPARC [7]

Microscope

  • FEI TECNAI SPIRIT [69]
  • FEI TECNAI 12 [10]
  • FEI TECNAI ARCTICA [6]
  • FEI TALOS ARCTICA [1]
  • FEI TITAN KRIOS [1]

Electron Source

  • LAB6 [79]
  • FIELD EMISSION GUN [8]

Film or detector model

  • OTHER [66]
  • TVIPS TEMCAM-F416 4K X 4K [13]
  • GATAN K2 SUMMIT 4K X 4K [8]

External links

  • PDB [2]
  • AlphaFold DB [1]
  • ChEBI [1]
  • ChEMBL [1]
  • Gene Ontology [1]
  • InterPro [1]
  • PDBe-Kb [1]
  • Pfam [1]
  • UniProt [1]