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author:"Berger M"

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Current Database

  • EMDB [10]
  • EMPIAR [1]

Current status

  • REL [11]

Sample type

  • Complex [10]
  • Ligand [6]
  • Protein [6]
  • RNA [6]

Organism

  • Escherichia coli [7]
  • Streptococcus sanguinis [3]
  • Escherichia coli [3]
  • Drosophila melanogaster [3]
  • Escherichia coli [2]
  • Escherichia coli [1]

EM Method

  • Single-particle [10]

Resolution

  • ≥ 2Å and < 3Å [9]
  • ≥ 3Å and < 4Å [1]

Release Date

  • 2026 [7]
  • 2023 [4]

Author by name

  • Berger M [11]
  • Morici M [11]
  • Safdari HA [11]
  • Wilson DN [11]
  • Av-gay Y [7]
  • Corazza M [7]
  • Dhar N [7]
  • Ejim L [7]
  • Klepacki D [7]
  • Mankin A [7]
  • Sahile H [7]
  • Travin D [7]
  • Vazquez-laslop N [7]
  • Wang L [7]
  • Wang W [7]
  • Wright G [7]
  • Xu M [7]
  • Yarlagadda V [7]
  • Beckert B [4]
  • Cook MA [4]
  • Fitzgerald M [4]
  • Golas AJ [4]
  • Guitor AK [4]
  • Hung DT [4]
  • Koller TO [4]
  • Lin S [4]
  • Nietupski RM [4]
  • Rao VN [4]
  • Schaenzer AJ [4]
  • Bond A [3]
  • Chhabra N [3]
  • Cook M [3]
  • Gomez J [3]
  • Guitor A [3]
  • Hackenberger D [3]
  • Hung D [3]
  • Kaur KJ [3]
  • Lele DS [3]
  • Rao V [3]
  • Safdari H [3]
  • Schaenzer A [3]
  • Surette M [3]
  • Tertigas D [3]
  • Wilson D [3]

Journal

  • NAT CHEM BIOL [4]
  • TO BE PUBLISHED [4]
  • RES SQ [3]
  • NAT CELL BIOL [1]

Software

  • RELION [10]
  • CTFFIND [2]

Microscope

  • TFS KRIOS [7]
  • FEI TITAN KRIOS [3]

Electron Source

  • FIELD EMISSION GUN [10]

Film or detector model

  • GATAN K3 6K X 4K [7]
  • FEI FALCON IV 4K X 4K [3]

EMPIAR Experiment type

  • EMDB [1]

EMPIAR Image category

  • MICROGRAPHS - MULTIFRAME [1]

External links

  • AlphaFold DB [6]
  • EMPIAR [3]
  • EMDB [1]
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Showing 1 - 10 of 11. Page 1 of 2
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EMD-56520
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3D View
Cryo-EM map of SKM-70S complex State 2 Accommodating A-tRNA
CryoEM
Release date: Sept. 2, 2026
Resolution: 2.3 Å
EM Method: Single-particle

Cook MA, Xu M, Wang W, Rao VN, Schaenzer AJ, Wang L, Yarlagadda V, Guitor AK, Ejim L, Wright G, Golas AJ, Nietupski RM, Fitzgerald M, Hung DT, Sahile H, Av-Gay Y, Lin S, Dhar N, Travin D, Klepacki D, Vazquez-Laslop N, Mankin A, Morici M, Corazza M, Safdari HA, Berger M, Wilson DN

To Be Published

EMD-56525
Download Map
3D View
Cryo-EM map of SKM-70S complex State 4 Accommodated A-tRNA
CryoEM
Release date: Sept. 2, 2026
Resolution: 2.3 Å
EM Method: Single-particle

Cook MA, Xu M, Wang W, Rao VN, Schaenzer AJ, Wang L, Yarlagadda V, Guitor AK, Ejim L, Wright G, Golas AJ, Nietupski RM, Fitzgerald M, Hung DT, Sahile H, Av-Gay Y, Lin S, Dhar N, Travin D, Klepacki D, Vazquez-Laslop N, Mankin A, Morici M, Corazza M, Safdari HA, Berger M, Wilson DN

To Be Published

EMD-56530
Download Map
3D View
Cryo-EM map of SKM-70S complex State 6 Empty, canonical
CryoEM
Release date: Sept. 2, 2026
Resolution: 2.75 Å
EM Method: Single-particle

Cook MA, Xu M, Wang W, Rao VN, Schaenzer AJ, Wang L, Yarlagadda V, Guitor AK, Ejim L, Wright G, Golas AJ, Nietupski RM, Fitzgerald M, Hung DT, Sahile H, Av-Gay Y, Lin S, Dhar N, Travin D, Klepacki D, Vazquez-Laslop N, Mankin A, Morici M, Corazza M, Safdari HA, Berger M, Wilson DN

To Be Published

EMD-57122
Download Map
3D View
Cryo-EM map of SKM-70S complex State 7 Empty, rotated
CryoEM
Release date: Sept. 2, 2026
Resolution: 3.42 Å
EM Method: Single-particle

Cook MA, Xu M, Wang W, Rao VN, Schaenzer AJ, Wang L, Yarlagadda V, Guitor AK, Ejim L, Wright G, Golas AJ, Nietupski RM, Fitzgerald M, Hung DT, Sahile H, Av-Gay Y, Lin S, Dhar N, Travin D, Klepacki D, Vazquez-Laslop N, Mankin A, Morici M, Corazza M, Safdari HA, Berger M, Wilson DN

To Be Published

EMD-53311
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3D View
Cryo-EM map of SKM-70S ribosomal stalled complex in the major state vacant A-site, canon
CryoEM
Release date: Feb. 18, 2026
Resolution: 2.26 Å
EM Method: Single-particle
Fitted PDBs: 9qqq
Q-score: 0.617
Similar entry percentile: 65%

Wright G, Cook M, Xu M, Morici M, Travin D, Wang W, Klepacki D, Chhabra N, Rao V, Sahile H, Hackenberger D, Safdari H, Berger M, Corazza M, Bond A, Guitor A, Tertigas D, Wang L, Schaenzer A, Ejim L, Yarlagadda V, Gomez J, Surette M, Av-Gay Y, Dhar N, Hung D, Vazquez-Laslop N, Mankin A, Wilson D

Res Sq (2025) [ Pubmed: 41282059 DOI: doi:10.21203/rs.3.rs-7820265/v1 ]

EMD-53341
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3D View
Cryo-EM structure of SKM-70S ribosomal stalled complex in the A-tRNA positioned Body open state.
CryoEM
Release date: Feb. 18, 2026
Resolution: 2.62 Å
EM Method: Single-particle
Fitted PDBs: 9qsj
Q-score: 0.613
Similar entry percentile: 87%

Wright G, Cook M, Xu M, Morici M, Travin D, Wang W, Klepacki D, Chhabra N, Rao V, Sahile H, Hackenberger D, Safdari H, Berger M, Corazza M, Bond A, Guitor A, Tertigas D, Wang L, Schaenzer A, Ejim L, Yarlagadda V, Gomez J, Surette M, Av-Gay Y, Dhar N, Hung D, Vazquez-Laslop N, Mankin A, Wilson D

Res Sq (2025) [ Pubmed: 41282059 DOI: doi:10.21203/rs.3.rs-7820265/v1 ]

EMD-55145
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3D View
Cryo-EM structure of SKM-70S ribosomal stalled complex in the rotated state with hybrid tRNAs
CryoEM
Release date: Feb. 18, 2026
Resolution: 2.6 Å
EM Method: Single-particle
Fitted PDBs: 9sro
Q-score: 0.583
Similar entry percentile: 76%

Wright G, Cook M, Xu M, Morici M, Travin D, Wang W, Klepacki D, Chhabra N, Rao V, Sahile H, Hackenberger D, Safdari H, Berger M, Corazza M, Bond A, Guitor A, Tertigas D, Wang L, Schaenzer A, Ejim L, Yarlagadda V, Gomez J, Surette M, Av-Gay Y, Dhar N, Hung D, Vazquez-Laslop N, Mankin A, Wilson D

Res Sq (2025) [ Pubmed: 41282059 DOI: doi:10.21203/rs.3.rs-7820265/v1 ]

EMPIAR-11388
Related EMDB
EMD-15523 EMD-15488 EMD-15533
Cryo-Electron microscopy of the antimicrobial peptide Drosocin from Drosophila melanogaster bound to the E.coli 70S ribosome.
Release date: May 16, 2023
Dataset size: 7.9 TB
Experiment type: EMDB

Koller TO, Morici M, Berger M, Safdari HA, Lele DS, Beckert B, Kaur KJ, Wilson DN

Nat Cell Biol (2023) [ DOI: 10.1038/s41589-023-01293-7 Pubmed: 36997646 ]

Image sets:
  • Unaligned movies of cryo-EM data collection of antimicrobial peptide drosocin 1 from Drosophila melanogaster bound to the 70S E.coli ribosome
EMD-15488
Download Map
3D View
Raw data
EMPIAR-11388
Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the terminating ribosome
CryoEM
Release date: March 8, 2023
Resolution: 2.3 Å
EM Method: Single-particle
Fitted PDBs: 8akn

Koller TO, Morici M, Berger M, Safdari HA, Lele DS, Beckert B, Kaur KJ, Wilson DN

Nat Chem Biol (2023) 19 pp. 1072-1081 [ Pubmed: 36997646 DOI: doi:10.1038/s41589-023-01293-7 ]

EMD-15523
Download Map
3D View
Raw data
EMPIAR-11388
Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the elongating ribosome
CryoEM
Release date: March 8, 2023
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 8am9

Koller TO, Morici M, Berger M, Safdari HA, Lele DS, Beckert B, Kaur KJ, Wilson DN

Nat Chem Biol (2023) 19 pp. 1072-1081 [ Pubmed: 36997646 DOI: doi:10.1038/s41589-023-01293-7 ]

Sort by: Download
Showing 1 - 10 of 11. Page 1 of 2
Display:
Statistics
×

Download



Preview 10 entries View All Download file

Filter By

Current Database

  • EMDB [10]
  • EMPIAR [1]

Current status

  • REL [11]

Sample type

  • Complex [10]
  • Ligand [6]
  • Protein [6]
  • RNA [6]

Organism

  • Escherichia coli [7]
  • Streptococcus sanguinis [3]
  • Escherichia coli [3]
  • Drosophila melanogaster [3]
  • Escherichia coli [2]
  • Escherichia coli [1]

EM Method

  • Single-particle [10]

Resolution

  • ≥ 2Å and < 3Å [9]
  • ≥ 3Å and < 4Å [1]

Release Date

  • 2026 [7]
  • 2023 [4]

Author by name

  • Berger M [11]
  • Morici M [11]
  • Safdari HA [11]
  • Wilson DN [11]
  • Av-gay Y [7]
  • Corazza M [7]
  • Dhar N [7]
  • Ejim L [7]
  • Klepacki D [7]
  • Mankin A [7]
  • Sahile H [7]
  • Travin D [7]
  • Vazquez-laslop N [7]
  • Wang L [7]
  • Wang W [7]
  • Wright G [7]
  • Xu M [7]
  • Yarlagadda V [7]
  • Beckert B [4]
  • Cook MA [4]
  • Fitzgerald M [4]
  • Golas AJ [4]
  • Guitor AK [4]
  • Hung DT [4]
  • Koller TO [4]
  • Lin S [4]
  • Nietupski RM [4]
  • Rao VN [4]
  • Schaenzer AJ [4]
  • Bond A [3]
  • Chhabra N [3]
  • Cook M [3]
  • Gomez J [3]
  • Guitor A [3]
  • Hackenberger D [3]
  • Hung D [3]
  • Kaur KJ [3]
  • Lele DS [3]
  • Rao V [3]
  • Safdari H [3]
  • Schaenzer A [3]
  • Surette M [3]
  • Tertigas D [3]
  • Wilson D [3]

Journal

  • NAT CHEM BIOL [4]
  • TO BE PUBLISHED [4]
  • RES SQ [3]
  • NAT CELL BIOL [1]

Software

  • RELION [10]
  • CTFFIND [2]

Microscope

  • TFS KRIOS [7]
  • FEI TITAN KRIOS [3]

Electron Source

  • FIELD EMISSION GUN [10]

Film or detector model

  • GATAN K3 6K X 4K [7]
  • FEI FALCON IV 4K X 4K [3]

EMPIAR Experiment type

  • EMDB [1]

EMPIAR Image category

  • MICROGRAPHS - MULTIFRAME [1]

External links

  • AlphaFold DB [6]
  • EMPIAR [3]
  • EMDB [1]