DAC: DAC for study SEQCAP WGS Ethiopia Genome Project high coverage

DAC Accession Contact Person Email Access Information
EGAC00001000107 Christopher Tyler-Smith cts@sanger.ac.uk http://www.ebi.ac.uk/ega/dacs/EGAC00001000107

This DAC controls 1 datasets:

Dataset Accession Technology Samplessort descending Description
EGAD00001000696 Illumina HiSeq 2000; 5 The Ethiopian area stands among the most ancient ones ever occupied by human populations and their ancestors. Particularly, according to archaeological evidences, it is possible to trace back the presence of Hominids up to at least 3 million years ago. Furthermore, the present day human populations show a great cultural, linguistic and historic diversity which makes them essential candidate to investigate a considerable part of the African variability. Following the typing of 300 Ethiopian samples on Illumina Omni 1M (see Human Variability in Ethiopia project, previously approved by the Genotyping committee) we now have a clearer idea on which populations living in the area include the most of the diversity. This project therefore aims to sequence the whole genome of 300 individuals at low (4-8x) depth belonging to the six most representative populations of the Ethiopian area to produce a unique catalogue of variants peculiar of the North East Africa. Furthermore 6 samples (one from each population) will also be sequenced at high (30x) depth to ensure full coverage of the diversity spectrum. The retrieved variants will be of great help in evaluating the demographic dynamics of those populations as well as shedding light on the migrations out of Africa.

DAC description