DAC: DAC University of Cologne

DAC Accession Contact Person Email Access Information
EGAC00001000064 Dr. Graziella DAC-info@uni-koeln.de http://www.ebi.ac.uk/ega/dacs/EGAC00001000064

This DAC controls 10 datasets:

Dataset Accessionsort descending Technology Samples Description
EGAD00001000703 Illumina Genome Analyzer IIx; 29 SCLC - Whole genome sequencing data Publication Peifer et al., 2012, Nature Genetics
EGAD00001000716 Illumina HiSeq 2000; 25 RNAseq data, Publication Fernandez-Cuesta et al., 2014, CD74-NRG1 fusions in lung adenocarcinoma
EGAD00001000746 Illumina HiSeq 2000; 25 Fernandez-Cuesta et al., RNAseq data Pipline
EGAD00001000795 Illumina HiSeq 2000; 69 Fernandez-Cuesta et al, 2014, Nature Communication, RNA Sequencing data set
EGAD00001000813 Illumina HiSeq 2000; 30 Fernandez-Cuesta et al., 2014, Nature Communication, Whole genome sequencing was performed using a read length of 2x100 bp for all samples. On average, 110 Gb of sequence were produced per sample, aiming a mean coverage of 30x for both tumour and matched normal.
EGAD00001000820 Illumina HiSeq 2000; 15 Fernandez-Cuesta et al, 2014, Nature Communication, Whole exome sequencing data set
EGAD00010000526 Affymetrics_SNP_6.0- 63 SNP 6.0 arrays of small cell lung cancer
EGAD00010000546 Affymetrics_SNP_6.0- 74 SNP 6.0 arrays of carcinoid samples
EGAD00010000554 1032 SNP 6.0 arrays of small cell lung cancer
EGAD00010000556 1032 SNP 6.0 arrays of small cell lung cancer

DAC description