CHEBI:58189 - GDP(3−)

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ChEBI Name GDP(3−)
ChEBI ID CHEBI:58189
ChEBI ASCII Name GDP(3-)
Definition A nucleoside 5'-diphosphate(3−) obtained by deprotonation of the three diphosphate OH groups of guanosine 5'-diphosphate (GMP); major species at pH 7.3.
Stars This entity has been manually annotated by the ChEBI Team.
Supplier Information
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Formula C10H12N5O11P2
Net Charge -3
Average Mass 440.17670
Monoisotopic Mass 440.001
InChI InChI=1S/C10H15N5O11P2/c11-10-13-7-4(8(18)14-10)12-2-15(7)9-6(17)5(16)3(25-9)1-24-28(22,23)26-27(19,20)21/h2-3,5-6,9,16-17H,1H2,(H,22,23)(H2,19,20,21)(H3,11,13,14,18)/p-3/t3-,5-,6-,9-/m1/s1
InChIKey QGWNDRXFNXRZMB-UUOKFMHZSA-K
SMILES Nc1nc2n(cnc2c(=O)[nH]1)[C@@H]1O[C@H](COP([O-])(=O)OP([O-])([O-])=O)[C@@H](O)[C@H]1O
Metabolite of Species Details
Saccharomyces cerevisiae (NCBI:txid4932) Source: yeast.sf.net See: PubMed
Homo sapiens (NCBI:txid9606) See: DOI
Roles Classification
Biological Role(s): Saccharomyces cerevisiae metabolite
Any fungal metabolite produced during a metabolic reaction in Baker's yeast (Saccharomyces cerevisiae ).
human metabolite
Any mammalian metabolite produced during a metabolic reaction in humans (Homo sapiens).
View more via ChEBI Ontology
ChEBI Ontology
Outgoing GDP(3−) (CHEBI:58189) has role Saccharomyces cerevisiae metabolite (CHEBI:75772)
GDP(3−) (CHEBI:58189) has role human metabolite (CHEBI:77746)
GDP(3−) (CHEBI:58189) is a nucleoside 5'-diphosphate(3−) (CHEBI:57930)
GDP(3−) (CHEBI:58189) is conjugate base of GDP(2−) (CHEBI:65180)
Incoming N2-(1-hydroxy-2-oxoethyl)-GDP (CHEBI:141574) has functional parent GDP(3−) (CHEBI:58189)
N2-(1-hydroxy-2-oxopropyl)-GDP(3−) (CHEBI:141573) has functional parent GDP(3−) (CHEBI:58189)
GDP(2−) (CHEBI:65180) is conjugate acid of GDP(3−) (CHEBI:58189)
IUPAC Name
5'-O-[(phosphonatooxy)phosphinato]guanosine
Synonyms Sources
GDP UniProt
GDP trianion ChEBI
guanosine 5'-diphosphate ChEBI
guanosine 5'-diphosphate trianion ChEBI
guanosine 5'-diphosphate(3−) ChEBI
Registry Number Type Source
4896956 Reaxys Registry Number Reaxys
Citations Waiting for Citations Types Sources
18433830 PubMed citation Europe PMC
8632770 PubMed citation Europe PMC
Last Modified
13 March 2017