CHEBI:16952 - 5-hydroxymethyldeoxycytidylic acid

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ChEBI Name 5-hydroxymethyldeoxycytidylic acid
ChEBI ID CHEBI:16952
Definition A 2'-deoxycytidine phosphate compound having the phosphate group at the 5'-position and a hydroxymethyl substituent at the 5-position.
Stars This entity has been manually annotated by the ChEBI Team.
Secondary ChEBI IDs CHEBI:2078, CHEBI:12138, CHEBI:20590
Supplier Information
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Formula C10H16N3O8P
Net Charge 0
Average Mass 337.22310
Monoisotopic Mass 337.06750
InChI InChI=1S/C10H16N3O8P/c11-9-5(3-14)2-13(10(16)12-9)8-1-6(15)7(21-8)4-20-22(17,18)19/h2,6-8,14-15H,1,3-4H2,(H2,11,12,16)(H2,17,18,19)/t6-,7+,8+/m0/s1
InChIKey BTIWPBKNTZFNRI-XLPZGREQSA-N
SMILES Nc1nc(=O)n(cc1CO)[C@H]1C[C@H](O)[C@@H](COP(O)(O)=O)O1
ChEBI Ontology
Outgoing 5-hydroxymethyldeoxycytidylic acid (CHEBI:16952) is a 2'-deoxycytidine phosphate (CHEBI:37092)
5-hydroxymethyldeoxycytidylic acid (CHEBI:16952) is a pyrimidine 2'-deoxyribonucleoside 5'-monophosphate (CHEBI:36995)
5-hydroxymethyldeoxycytidylic acid (CHEBI:16952) is conjugate acid of 5-hydroxymethyldeoxycytidylate(2−) (CHEBI:57962)
Incoming 5-hydroxymethyldeoxycytidylate(2−) (CHEBI:57962) is conjugate base of 5-hydroxymethyldeoxycytidylic acid (CHEBI:16952)
5-hydroxymethyldeoxycytidine 5'-monophosphate residue (CHEBI:137351) is substituent group from 5-hydroxymethyldeoxycytidylic acid (CHEBI:16952)
IUPAC Name
2'-deoxy-5-(hydroxymethyl)cytidine 5'-(dihydrogen phosphate)
Synonyms Sources
2'-Deoxy-5-hydroxymethylcytidine 5'-phosphate KEGG COMPOUND
5-Hmdcyt ChemIDplus
5-Hydroxymethyldeoxycytidylate KEGG COMPOUND
5-Hydroxymethyldeoxycytidylic acid KEGG COMPOUND
Manual Xref Database
C03997 KEGG COMPOUND
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Registry Numbers Types Sources
13009-95-5 CAS Registry Number ChemIDplus
47896 Beilstein Registry Number Beilstein
Last Modified
10 August 2017