CHEBI:10048 - XDP

Main ChEBI Ontology Automatic Xrefs Reactions Pathways Models
ChEBI Name XDP
ChEBI ID CHEBI:10048
Definition A purine ribonucleoside 5'-diphosphate having xanthosine as the nucleobase.
Stars This entity has been manually annotated by the ChEBI Team.
Supplier Information
Download Molfile XML SDF
Formula C10H14N4O12P2
Net Charge 0
Average Mass 444.18530
Monoisotopic Mass 444.008
InChI InChI=1S/C10H14N4O12P2/c15-5-3(1-24-28(22,23)26-27(19,20)21)25-9(6(5)16)14-2-11-4-7(14)12-10(18)13-8(4)17/h2-3,5-6,9,15-16H,1H2,(H,22,23)(H2,19,20,21)(H2,12,13,17,18)/t3-,5-,6-,9-/m1/s1
InChIKey YMOPVQQBWLGDOD-UUOKFMHZSA-N
SMILES O[C@@H]1[C@@H](COP(O)(=O)OP(O)(O)=O)O[C@H]([C@@H]1O)n1cnc2c1[nH]c(=O)[nH]c2=O
Metabolite of Species Details
Escherichia coli (NCBI:txid562) See: PubMed
Roles Classification
Biological Role(s): Escherichia coli metabolite
Any bacterial metabolite produced during a metabolic reaction in Escherichia coli.
mouse metabolite
Any mammalian metabolite produced during a metabolic reaction in a mouse (Mus musculus).
(via nucleoside diphosphate )
View more via ChEBI Ontology
ChEBI Ontology
Outgoing XDP (CHEBI:10048) has role Escherichia coli metabolite (CHEBI:76971)
XDP (CHEBI:10048) is a purine ribonucleoside 5'-diphosphate (CHEBI:37038)
XDP (CHEBI:10048) is a xanthosine 5'-phosphate (CHEBI:53012)
XDP (CHEBI:10048) is conjugate acid of XDP(3−) (CHEBI:59884)
Incoming XDP(3−) (CHEBI:59884) is conjugate base of XDP (CHEBI:10048)
IUPAC Name
xanthosine 5'-(trihydrogen diphosphate)
Manual Xref Database
US4880918 Patent
View more database links
Registry Number Type Source
7400006 Beilstein Registry Number Beilstein
Last Modified
25 January 2016