CHEBI:52084 - Indo-1 dye

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ChEBI Name Indo-1 dye
ChEBI ID CHEBI:52084
Stars This entity has been manually annotated by the ChEBI Team.
Supplier Information
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Formula C32H31N3O12
Net Charge 0
Average Mass 649.60140
InChI InChI=1S/C32H31N3O12/c1-18-2-6-24(34(14-28(36)37)15-29(38)39)26(10-18)46-8-9-47-27-13-20(5-7-25(27)35(16-30(40)41)17-31(42)43)22-11-19-3-4-21(32(44)45)12-23(19)33-22/h2-7,10-13,33H,8-9,14-17H2,1H3,(H,36,37)(H,38,39)(H,40,41)(H,42,43)(H,44,45)
InChIKey AMHAQOBUZCQMHN-UHFFFAOYSA-N
SMILES Cc1ccc(N(CC(O)=O)CC(O)=O)c(OCCOc2cc(ccc2N(CC(O)=O)CC(O)=O)-c2cc3ccc(cc3[nH]2)C(O)=O)c1
Roles Classification
Application(s): fluorochrome
A fluorescent dye used to stain biological specimens.
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ChEBI Ontology
Outgoing Indo-1 dye (CHEBI:52084) has role fluorochrome (CHEBI:51217)
Indo-1 dye (CHEBI:52084) is a indoles (CHEBI:24828)
IUPAC Name
2-(4-[bis(carboxymethyl)amino]-3-{[2-({2-[bis(carboxymethyl)amino]-5-methylphenyl}oxy)ethyl]oxy}phenyl)-1H-indole-6-carboxylic acid
Synonym Source
Indo 1 ChemIDplus
Registry Number Type Source
96314-96-4 CAS Registry Number ChemIDplus
Last Modified
06 March 2009