CHEBI:28816 - 2-deoxy-D-ribose

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ChEBI Name 2-deoxy-D-ribose
ChEBI ID CHEBI:28816
ChEBI ASCII Name 2-deoxy-D-ribose
Definition A deoxypentose that is D-ribose in which the hydroxy group at position C-2 is replaced by hydrogen.
Stars This entity has been manually annotated by the ChEBI Team.
Secondary ChEBI IDs CHEBI:4432, CHEBI:19556
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Formula C5H10O4
Net Charge 0
Average Mass 134.13050
Monoisotopic Mass 134.058
InChI InChI=1S/C5H10O4/c6-2-1-4(8)5(9)3-7/h2,4-5,7-9H,1,3H2/t4-,5+/m0/s1
InChIKey ASJSAQIRZKANQN-CRCLSJGQSA-N
SMILES OC[C@@H](O)[C@@H](O)CC=O
Metabolite of Species Details
Mus musculus (NCBI:10090) Source: BioModels - MODEL1507180067 See: PubMed
Saccharomyces cerevisiae (NCBI:4932) Source: yeast.sf.net See: PubMed
Homo sapiens (NCBI:9606) See: DOI
Roles Classification
Biological Role(s): Saccharomyces cerevisiae metabolite
Any fungal metabolite produced during a metabolic reaction in Baker's yeast (Saccharomyces cerevisiae ).
human metabolite
Any mammalian metabolite produced during a metabolic reaction in humans (Homo sapiens).
mouse metabolite
Any mammalian metabolite produced during a metabolic reaction in a mouse (Mus musculus).
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ChEBI Ontology
Outgoing 2-deoxy-D-ribose (CHEBI:28816) has functional parent D-ribose (CHEBI:16988)
2-deoxy-D-ribose (CHEBI:28816) has role Saccharomyces cerevisiae metabolite (CHEBI:75772)
2-deoxy-D-ribose (CHEBI:28816) has role human metabolite (CHEBI:77746)
2-deoxy-D-ribose (CHEBI:28816) has role mouse metabolite (CHEBI:75771)
2-deoxy-D-ribose (CHEBI:28816) is a deoxypentose (CHEBI:23635)
Incoming 2-deoxyribose 5-triphosphate (CHEBI:31464) has functional parent 2-deoxy-D-ribose (CHEBI:28816)
2-deoxy-α-D-ribopyranose (CHEBI:27806) is a 2-deoxy-D-ribose (CHEBI:28816)
IUPAC Name
2-deoxy-D-erythro-pentose
Synonyms Sources
2-Deoxy-D-erythro-pentose KEGG COMPOUND
2-Deoxy-D-ribose KEGG COMPOUND
2-deoxy-D-ribose UniProt
D-dRib JCBN
Deoxyribose KEGG COMPOUND
Thyminose KEGG COMPOUND
Database Links Databases
2-DEOXYRIBOSE MetaCyc
2DR PDBeChem
C00001115 KNApSAcK
C01801 KEGG COMPOUND
Deoxyribose Wikipedia
HMDB03224 HMDB
View more database links
Registry Numbers Types Sources
1721978 Reaxys Registry Number Reaxys
533-67-5 CAS Registry Number KEGG COMPOUND
533-67-5 CAS Registry Number ChemIDplus
Citation Waiting for Citations Type Source
22770225 PubMed citation Europe PMC
Last Modified
04 July 2016