CHEBI:27551 - 5-methylcytosine

Main ChEBI Ontology Automatic Xrefs Reactions Pathways Models
ChEBI Name 5-methylcytosine
ChEBI ID CHEBI:27551
Definition A pyrimidine that is a derivative of cytosine, having a methyl group at the 5-position.
Stars This entity has been manually annotated by the ChEBI Team.
Submitter Anonymous
Secondary ChEBI IDs CHEBI:85013, CHEBI:20608, CHEBI:2094
Supplier Information
Download Molfile XML SDF
Wikipedia License
Waiting for wikipedia content
Read full article at Wikipedia
Formula C5H7N3O
Net Charge 0
Average Mass 125.12860
Monoisotopic Mass 125.059
InChI InChI=1S/C5H7N3O/c1-3-2-7-5(9)8-4(3)6/h2H,1H3,(H3,6,7,8,9)
InChIKey LRSASMSXMSNRBT-UHFFFAOYSA-N
SMILES Cc1c[nH]c(=O)nc1N
Roles Classification
Biological Role(s): human metabolite
Any mammalian metabolite produced during a metabolic reaction in humans (Homo sapiens).
View more via ChEBI Ontology
ChEBI Ontology
Outgoing 5-methylcytosine (CHEBI:27551) has functional parent cytosine (CHEBI:16040)
5-methylcytosine (CHEBI:27551) has role human metabolite (CHEBI:77746)
5-methylcytosine (CHEBI:27551) is a pyrimidines (CHEBI:39447)
Incoming 5-methylcytosin-1-yl group (CHEBI:65274) is substituent group from 5-methylcytosine (CHEBI:27551)
IUPAC Name
4-amino-5-methylpyrimidin-2(1H)-one
Synonyms Sources
4-amino-5-methyl-2(1H)-pyrimidinone ChemIDplus
4-Amino-5-methyl-2-pyrimidinol NIST Chemistry WebBook
5-Methylcytosine KEGG COMPOUND
5-methylcytosine UniProt
Database Links Databases
5-Methylcytosine Wikipedia
C02376 KEGG COMPOUND
CPD0-2018 MetaCyc
View more database links
Registry Numbers Types Sources
120387 Beilstein Registry Number Beilstein
508871 Reaxys Registry Number Reaxys
554-01-8 CAS Registry Number KEGG COMPOUND
554-01-8 CAS Registry Number NIST Chemistry WebBook
554-01-8 CAS Registry Number ChemIDplus
Citations Waiting for Citations Types Sources
17325422 PubMed citation Europe PMC
22770225 PubMed citation Europe PMC
25304211 PubMed citation Europe PMC
25421665 PubMed citation Europe PMC
25510268 PubMed citation Europe PMC
25510270 PubMed citation Europe PMC
25522353 PubMed citation Europe PMC
25620416 PubMed citation Europe PMC
25675106 PubMed citation Europe PMC
Last Modified
16 July 2015