CHEBI:17562 - cytidine

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ChEBI Name cytidine
ChEBI ID CHEBI:17562
Definition A pyrimidine nucleoside in which cytosine is attached to ribofuranose via a β-N1-glycosidic bond.
Stars This entity has been manually annotated by the ChEBI Team.
Secondary ChEBI IDs CHEBI:14063, CHEBI:41704, CHEBI:41709, CHEBI:41649, CHEBI:41686, CHEBI:4053, CHEBI:23515
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Formula C9H13N3O5
Net Charge 0
Average Mass 243.21674
Monoisotopic Mass 243.086
InChI InChI=1S/C9H13N3O5/c10-5-1-2-12(9(16)11-5)8-7(15)6(14)4(3-13)17-8/h1-2,4,6-8,13-15H,3H2,(H2,10,11,16)/t4-,6-,7-,8-/m1/s1
InChIKey UHDGCWIWMRVCDJ-XVFCMESISA-N
SMILES Nc1ccn([C@@H]2O[C@H](CO)[C@@H](O)[C@H]2O)c(=O)n1
Metabolite of Species Details
Mus musculus (NCBI:10090) Source: BioModels - MODEL1507180067 See: PubMed
Saccharomyces cerevisiae (NCBI:4932) Source: yeast.sf.net See: PubMed
Escherichia coli (NCBI:562) See: PubMed
Homo sapiens (NCBI:9606) See: DOI
Roles Classification
Biological Role(s): Escherichia coli metabolite
Any bacterial metabolite produced during a metabolic reaction in Escherichia coli.
Saccharomyces cerevisiae metabolite
Any fungal metabolite produced during a metabolic reaction in Baker's yeast (Saccharomyces cerevisiae ).
human metabolite
Any mammalian metabolite produced during a metabolic reaction in humans (Homo sapiens).
mouse metabolite
Any mammalian metabolite produced during a metabolic reaction in a mouse (Mus musculus).
View more via ChEBI Ontology
ChEBI Ontology
Outgoing cytidine (CHEBI:17562) has functional parent cytosine (CHEBI:16040)
cytidine (CHEBI:17562) has role Escherichia coli metabolite (CHEBI:76971)
cytidine (CHEBI:17562) has role Saccharomyces cerevisiae metabolite (CHEBI:75772)
cytidine (CHEBI:17562) has role human metabolite (CHEBI:77746)
cytidine (CHEBI:17562) has role mouse metabolite (CHEBI:75771)
cytidine (CHEBI:17562) is a cytidines (CHEBI:23524)
Incoming cytidine residue (CHEBI:64656) is substituent group from cytidine (CHEBI:17562)
IUPAC Name
cytidine
Synonyms Sources
1-beta-D-Ribofuranosylcytosine HMDB
1β-D-ribofuranosylcytosine NIST Chemistry WebBook
4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE PDBeChem
4-amino-1-β-D-ribofuranosylpyrimidin-2(1H)-one ChEBI
4-amino-1β-D-ribofuranosyl-2(1H)-pyrimidinone NIST Chemistry WebBook
Cyd CBN
Cytidin ChEBI
Cytidine KEGG COMPOUND
cytidine UniProt
Cytosine riboside HMDB
cytosine-1beta-D-Ribofuranoside HMDB
Zytidin ChEBI
Database Links Databases
C00475 KEGG COMPOUND
CTN PDBeChem
Cytidine Wikipedia
CYTIDINE MetaCyc
D07769 KEGG DRUG
DB02097 DrugBank
HMDB00089 HMDB
View more database links
Registry Numbers Types Sources
65-46-3 CAS Registry Number NIST Chemistry WebBook
65-46-3 CAS Registry Number ChemIDplus
84763 Gmelin Registry Number Gmelin
89173 Beilstein Registry Number Beilstein
89173 Reaxys Registry Number Reaxys
Citations Waiting for Citations Types Sources
12591866 PubMed citation Europe PMC
15621516 PubMed citation Europe PMC
19194376 PubMed citation Europe PMC
Last Modified
27 January 2016