CHEBI:8351 - pradimicin C

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ChEBI Name pradimicin C
ChEBI ID CHEBI:8351
Definition A member of the class of pradimicins that is isolated from the cultured broth of Actinomadura hibisca No. P157-2 (ATCC 53557).
Stars This entity has been manually annotated by the ChEBI Team.
Supplier Information
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Formula C39H42N2O18
Net Charge 0
Average Mass 826.75340
Monoisotopic Mass 826.24326
InChI InChI=1S/C39H42N2O18/c1-10-5-17-23(30(48)20(10)36(52)41-11(2)37(53)54)22-15(8-16-24(31(22)49)27(45)14-6-13(55-4)7-18(42)21(14)26(16)44)28(46)34(17)58-39-33(51)35(25(40)12(3)57-39)59-38-32(50)29(47)19(43)9-56-38/h5-8,11-12,19,25,28-29,32-35,38-39,42-43,46-51H,9,40H2,1-4H3,(H,41,52)(H,53,54)/t11-,12-,19-,25+,28+,29+,32-,33-,34+,35+,38+,39+/m1/s1
InChIKey IHIIRQILYAXIOH-NUVDETJMSA-N
SMILES COc1cc(O)c2C(=O)c3cc4[C@H](O)[C@@H](O[C@@H]5O[C@H](C)[C@H](N)[C@H](O[C@@H]6OC[C@@H](O)[C@H](O)[C@H]6O)[C@H]5O)c5cc(C)c(C(=O)N[C@H](C)C(O)=O)c(O)c5-c4c(O)c3C(=O)c2c1
Metabolite of Species Details
Actinomadura hibisca (NCBI:txid68565) of strain P157-2 (ATCC 53557). See: PubMed
Roles Classification
Biological Role(s): antimicrobial agent
A substance that kills or slows the growth of microorganisms, including bacteria, viruses, fungi and protozoans.
(via pradimicin )
antifungal agent
An antimicrobial agent that destroys fungi by suppressing their ability to grow or reproduce.
(via pradimicin )
bacterial metabolite
Any prokaryotic metabolite produced during a metabolic reaction in bacteria.
(via pradimicin )
View more via ChEBI Ontology
ChEBI Ontology
Outgoing pradimicin C (CHEBI:8351) has functional parent D-alanine (CHEBI:15570)
pradimicin C (CHEBI:8351) is a L-alanine derivative (CHEBI:83943)
pradimicin C (CHEBI:8351) is a aromatic ether (CHEBI:35618)
pradimicin C (CHEBI:8351) is a disaccharide derivative (CHEBI:63353)
pradimicin C (CHEBI:8351) is a polyketide (CHEBI:26188)
pradimicin C (CHEBI:8351) is a polyphenol (CHEBI:26195)
pradimicin C (CHEBI:8351) is a pradimicin (CHEBI:83230)
pradimicin C (CHEBI:8351) is a secondary alcohol (CHEBI:35681)
IUPAC Name
(2R)-2-({[(5S,6S)-5-{[(2S,3R,4S,5S,6R)-5-amino-3-hydroxy-6-methyl-4-{[(2S,3R,4S,5R)-3,4,5-trihydroxytetrahydro-2H-pyran-2-yl]oxy}tetrahydro-2H-pyran-2-yl]oxy}-1,6,9,14-tetrahydroxy-11-methoxy-3-methyl-8,13-dioxo-5,6,8,13-tetrahydrobenzo[a]tetracen-2-yl]carbonyl}amino)propanoic acid
Synonym Source
Benanomicin B ChemIDplus
Manual Xrefs Databases
C00017595 KNApSAcK
C06786 KEGG COMPOUND
View more database links
Registry Numbers Types Sources
116249-66-2 CAS Registry Number ChemIDplus
4645265 Reaxys Registry Number Reaxys
Citations Waiting for Citations Types Sources
15900522 PubMed citation Europe PMC
17907132 PubMed citation Europe PMC
21119678 PubMed citation Europe PMC
2167304 PubMed citation Europe PMC
Last Modified
28 November 2014