CHEBI:52806 - C3-thiacarbocyanine cation

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ChEBI Name C3-thiacarbocyanine cation
ChEBI ID CHEBI:52806
Definition The cationic form of a C3 cyanine dye having 3-ethyl-1,3-benzothiazol-2(3H)-yl units at each end.
Stars This entity has been manually annotated by the ChEBI Team.
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Formula C21H21N2S2
Net Charge +1
Average Mass 365.53500
Monoisotopic Mass 365.11407
InChI InChI=1S/C21H21N2S2/c1-3-22-16-10-5-7-12-18(16)24-20(22)14-9-15-21-23(4-2)17-11-6-8-13-19(17)25-21/h5-15H,3-4H2,1-2H3/q+1
InChIKey JGLWGLKNDHZFAP-UHFFFAOYSA-N
SMILES [H]C(=Cc1sc2ccccc2[n+]1CC)C([H])=C1Sc2ccccc2N1CC
Roles Classification
Application(s): fluorochrome
A fluorescent dye used to stain biological specimens.
dye

(via cyanine dye )
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ChEBI Ontology
Outgoing C3-thiacarbocyanine cation (CHEBI:52806) has role fluorochrome (CHEBI:51217)
C3-thiacarbocyanine cation (CHEBI:52806) is a benzothiazoles (CHEBI:37947)
C3-thiacarbocyanine cation (CHEBI:52806) is a benzothiazolium ion (CHEBI:52838)
C3-thiacarbocyanine cation (CHEBI:52806) is a cyanine dye (CHEBI:37960)
Incoming C3-thiacarbocyanine (CHEBI:51895) has part C3-thiacarbocyanine cation (CHEBI:52806)
IUPAC Name
3-ethyl-2-[3-(3-ethyl-1,3-benzothiazol-2(3H)-ylidene)prop-1-en-1-yl]-1,3-benzothiazol-3-ium
Synonyms Sources
Dithiazanine ChemIDplus
Dithiazaninum ChemIDplus
Registry Number Type Source
7187-55-5 CAS Registry Number ChemIDplus
Last Modified
28 July 2009