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ChEBI
> Main
CHEBI:52101 - lissamine rhodamine
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ChEBI Name
lissamine rhodamine
ChEBI ID
CHEBI:52101
Definition
An organic sodium salt having 4-[3,6-bis(diethylamino)xanthenium-9-yl]benzene-1,3-disulfonate as the counterion.
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This entity has been manually annotated by the ChEBI Team.
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Formula
C27H29N2O7S2.Na
Net Charge
0
Average Mass
580.650
Monoisotopic Mass
580.13139
InChI
InChI=1S/C27H30N2O7S2.Na/c1-
5-
28(6-
2)
18-
9-
12-
21-
24(15-
18)
36-
25-
16-
19(29(7-
3)
8-
4)
10-
13-
22(25)
27(21)
23-
14-
11-
20(37(30,31)
32)
17-
26(23)
38(33,34)
35;/h9-
17H,5-
8H2,1-
4H3,(H-
,30,31,32,33,34,35)
;/q;+1/p-
1
InChIKey
SXQCTESRRZBPHJ-UHFFFAOYSA-M
SMILES
[Na+].CCN(CC)C1=CC2=[O+]C3=C(C=CC(=C3)N(CC)CC)C(=C2C=C1)C1=C(C=C(C=C1)S([O-])(=O)=O)S([O-])(=O)=O
Roles Classification
Application
(s):
fluorochrome
A fluorescent dye used to stain biological specimens.
histological dye
A dye used in microscopic or electron microscopic examination of cells and tissues to give contrast and to highlight particular features of interest, such as nuclei and cytoplasm.
fluorescent probe
A role played by a fluorescent molecular entity used to study the microscopic environment by fluorescence spectroscopy.
View more via ChEBI Ontology
ChEBI Ontology
Outgoing
lissamine rhodamine (
CHEBI:52101
)
has part
lissamine rhodamine anion (
CHEBI:52866
)
lissamine rhodamine (
CHEBI:52101
)
has role
fluorescent probe (
CHEBI:39442
)
lissamine rhodamine (
CHEBI:52101
)
has role
fluorochrome (
CHEBI:51217
)
lissamine rhodamine (
CHEBI:52101
)
has role
histological dye (
CHEBI:77178
)
lissamine rhodamine (
CHEBI:52101
)
is a
organic sodium salt (
CHEBI:38700
)
IUPAC Name
sodium 4-[3,6-bis(diethylamino)xanthenium-9-yl]benzene-1,3-disulfonate
Synonyms
Sources
Acid Red 52
ChemIDplus
Acid Red XB
ChemIDplus
Acid Rhodamine B
ChemIDplus
Amido Rhodamine B
ChemIDplus
C.I. 45100
ChEBI
Food Red 106
ChemIDplus
Kiton Rhodamine B
ChemIDplus
lissamine rhodamine B
ChEBI
Sulforhodamine B
ChemIDplus
Xylene Red B
ChemIDplus
Manual Xref
Database
C20348
KEGG COMPOUND
View more database links
Registry Number
Type
Source
3520-42-1
CAS Registry Number
ChemIDplus
Citations
Types
Sources
15117968
PubMed citation
Europe PMC
16150799
PubMed citation
Europe PMC
8853462
PubMed citation
Europe PMC
Last Modified
24 September 2020