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CHEBI:51608 - yakima yellow phosphoramidite
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ChEBI Name
yakima yellow phosphoramidite
ChEBI ID
CHEBI:51608
Definition
A fluorescent dye having an absorption wavelength of 530 nm and an emission wavelength of 550 nm, derived from fluorescein.
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This entity has been manually annotated by the ChEBI Team.
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Formula
C48H61Cl4N2O11P
Net Charge
0
Average Mass
1014.79100
Monoisotopic Mass
1012.27671
InChI
InChI=1S/C48H61Cl4N2O11P/c1-
26(2)
54(27(3)
4)
66(61-
21-
19-
55)
60-
20-
15-
13-
12-
14-
18-
53-
37(56)
17-
16-
29-
22-
32-
42(38(52)
41(29)
64-
45(59)
47(9,10)
11)
62-
39-
28(5)
40(63-
44(58)
46(6,7)
8)
36(51)
25-
33(39)
48(32)
31-
24-
35(50)
34(49)
23-
30(31)
43(57)
65-
48/h22-
27,55H,12-
21H2,1-
11H3,(H,53,56)
InChIKey
VGBRSXHVKYAAQZ-UHFFFAOYSA-N
SMILES
CC(C)
N(C(C)
C)
P(OCCO)
OCCCCCCNC(=O)
CCc1cc2c(Oc3c(C)
c(OC(=O)
C(C)
(C)
C)
c(Cl)
cc3C22OC(=O)
c3cc(Cl)
c(Cl)
cc23)
c(Cl)
c1OC(=O)
C(C)
(C)
C
Roles Classification
Application
(s):
fluorochrome
A fluorescent dye used to stain biological specimens.
dye
(via
xanthene dye
)
View more via ChEBI Ontology
ChEBI Ontology
Outgoing
yakima yellow phosphoramidite (
CHEBI:51608
)
has functional parent
fluorescein (lactone form) (
CHEBI:31624
)
yakima yellow phosphoramidite (
CHEBI:51608
)
has role
fluorochrome (
CHEBI:51217
)
yakima yellow phosphoramidite (
CHEBI:51608
)
is a
phosphoramidite (
CHEBI:59751
)
yakima yellow phosphoramidite (
CHEBI:51608
)
is a
pivalate ester (
CHEBI:50784
)
yakima yellow phosphoramidite (
CHEBI:51608
)
is a
xanthene dye (
CHEBI:37929
)
IUPAC Name
2',5,5',6-
tetrachloro-
7'-
{12-
[di(propan-
2-
yl)amino]-
15-
hydroxy-
3-
oxo-
11,13-
dioxa-
4-
aza-
12-
phosphapentadecyl}-
4'-
methyl-
3-
oxo-
3H-
spiro[2-
benzofuran-
1,9'-
xanthene]-
3',6'-
diyl bis(2,2-
dimethylpropanoate)
Last Modified
31 March 2017